Gene Symbol | TNFAIP3 |
Entrez Gene ID | 100622156 |
Full Name | TNF alpha induced protein 3 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
ORF » Species Summary » Sus scrofa » TNFAIP3 cDNA ORF clone
Gene Symbol | TNFAIP3 |
Entrez Gene ID | 100622156 |
Full Name | TNF alpha induced protein 3 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
XM_005659182.3 | XP_005659239.1 | tumor necrosis factor alpha-induced protein 3 isoform X1 |
NM_001267890.1 | NP_001254819.1 | tumor necrosis factor alpha-induced protein 3 |
XM_005659182.2 | XP_005659239.1 | tumor necrosis factor alpha-induced protein 3 isoform X1 |
XM_013992530.1 | XP_013847984.1 | tumor necrosis factor alpha-induced protein 3 isoform X1 |
XM_013992530.2 | XP_013847984.1 | tumor necrosis factor alpha-induced protein 3 isoform X1 |
XM_021077624.1 | XP_020933283.1 | tumor necrosis factor alpha-induced protein 3 isoform X1 |
Immunobiotic Lactobacillus jensenii elicits anti-inflammatory activity in porcine intestinal epithelial cells by modulating negative regulators of the Toll-like receptor signaling pathway.
Shimazu T, Villena J, Tohno M, Fujie H, Hosoya S, Shimosato T, Aso H, Suda Y, Kawai Y, Saito T, Makino S, Ikegami S, Itoh H, Kitazawa H
Infection and immunity80(1)276-88(2012 Jan)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TNFAIP3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TNFAIP3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe29923 | |
Clone ID Related Accession (Same CDS sequence) | NM_001267890.1 | |
Accession Version | NM_001267890.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-02 | |
Organism | Sus scrofa(pig) | |
Product | tumor necrosis factor alpha-induced protein 3 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB490119.1. On Jun 25, 2012 this sequence version replaced XM_003353200.2. ##Evidence-Data-START## Transcript exon combination :: AB490119.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1487420, SAMEA1876824 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001254819.1 |
CDS | 1..2358 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001267890.1 |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe01583 | |
Clone ID Related Accession (Same CDS sequence) | XM_005659182.3 , XM_005659182.2 , XM_013992530.1 , XM_013992530.2 , XM_021077624.1 | |
Accession Version | XM_005659182.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tumor necrosis factor alpha-induced protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005659182.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005659239.1 |
CDS | 367..2724 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005659182.3 |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe01583 | |
Clone ID Related Accession (Same CDS sequence) | XM_005659182.3 , XM_005659182.2 , XM_013992530.1 , XM_013992530.2 , XM_021077624.1 | |
Accession Version | XM_005659182.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | tumor necrosis factor alpha-induced protein 3 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609020.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005659182.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005659239.1 |
CDS | 270..2627 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005659182.2 |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe01583 | |
Clone ID Related Accession (Same CDS sequence) | XM_005659182.3 , XM_005659182.2 , XM_013992530.1 , XM_013992530.2 , XM_021077624.1 | |
Accession Version | XM_013992530.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | tumor necrosis factor alpha-induced protein 3 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609020.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013847984.1 |
CDS | 114..2471 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013992530.1 |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe01583 | |
Clone ID Related Accession (Same CDS sequence) | XM_005659182.3 , XM_005659182.2 , XM_013992530.1 , XM_013992530.2 , XM_021077624.1 | |
Accession Version | XM_013992530.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tumor necrosis factor alpha-induced protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013992530.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013847984.1 |
CDS | 3470..5827 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013992530.2 |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe01583 | |
Clone ID Related Accession (Same CDS sequence) | XM_005659182.3 , XM_005659182.2 , XM_013992530.1 , XM_013992530.2 , XM_021077624.1 | |
Accession Version | XM_021077624.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tumor necrosis factor alpha-induced protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020933283.1 |
CDS | 3440..5797 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021077624.1 |
1 | ATGGCTGAGC AACTCCTTCC CCTGGCTTTG TATTTGAGCA ACATGCGGAA GGCTGTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Immunobiotic Lactobacillus jensenii elicits anti-inflammatory activity in porcine intestinal epithelial cells by modulating negative regulators of the Toll-like receptor signaling pathway. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |