Gene Symbol | TRIM55 |
Entrez Gene ID | 100152010 |
Full Name | tripartite motif containing 55 |
Synonyms | muRF2 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » TRIM55 cDNA ORF clone
Gene Symbol | TRIM55 |
Entrez Gene ID | 100152010 |
Full Name | tripartite motif containing 55 |
Synonyms | muRF2 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021088509.1 | XP_020944168.1 | tripartite motif-containing protein 55 isoform X6 |
XM_013996714.1 | XP_013852168.1 | tripartite motif-containing protein 55 isoform X1 |
XM_021088506.1 | XP_020944165.1 | tripartite motif-containing protein 55 isoform X1 |
XM_013996714.2 | XP_013852168.1 | tripartite motif-containing protein 55 isoform X2 |
XM_021088507.1 | XP_020944166.1 | tripartite motif-containing protein 55 isoform X3 |
XM_013996715.1 | XP_013852169.1 | tripartite motif-containing protein 55 isoform X2 |
XM_013996715.2 | XP_013852169.1 | tripartite motif-containing protein 55 isoform X5 |
NM_001244691.1 | NP_001231620.1 | tripartite motif-containing protein 55 isoform 2 |
NM_001244690.1 | NP_001231619.1 | tripartite motif-containing protein 55 isoform 1 |
XM_021088508.1 | XP_020944167.1 | tripartite motif-containing protein 55 isoform X4 |
Porcine MuRF2 and MuRF3: molecular cloning, expression and association analysis with muscle production traits.
Shen H, Zhao SH, Cao JH, Li XY, Fan B
Molecular biology reports38(8)5115-23(2011 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The study suggested that the porcine MuRF2 and MuRF3 genes are involved in the muscle growth and development.
Title: Porcine MuRF2 and MuRF3: molecular cloning, expression and association analysis with muscle production traits.
The following TRIM55 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRIM55 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe28345 | |
Clone ID Related Accession (Same CDS sequence) | NM_001244690.1 | |
Accession Version | NM_001244690.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1620bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-08-25 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from HM366459.1. On or before Sep 25, 2011 this sequence version replaced XM_001928826.2, XM_001928831.2, XM_003355048.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: HM366459.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02672955, SAMN02673051 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001231619.1 |
CDS | 145..1764 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001244690.1 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe28347 | |
Clone ID Related Accession (Same CDS sequence) | NM_001244691.1 | |
Accession Version | NM_001244691.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1332bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-08-25 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from HM366460.1. On or before Oct 13, 2011 this sequence version replaced XM_003481391.1, XM_003481392.1, XM_003481393.1. Transcript Variant: This variant (2) lacks an in-frame exon in the coding region, compared to variant 1. The resulting protein (isoform 2) is shorter, compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: HM366460.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2041558, SAMN02672955 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001231620.1 |
CDS | 145..1476 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001244691.1 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247149 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088509.1 | |
Accession Version | XM_021088509.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1290bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTGAGG AGCACGAAGA CGAGCGCATC AACATCTACT GCCTGAACTG CGAAGTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944168.1 |
CDS | 336..1625 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021088509.1 |
1 | ATGTGTGAGG AGCACGAAGA CGAGCGCATC AACATCTACT GCCTGAACTG CGAAGTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34830 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996715.1 , XM_013996715.2 | |
Accession Version | XM_013996715.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | tripartite motif-containing protein 55 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610084.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852169.1 |
CDS | 173..1645 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013996715.1 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34830 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996715.1 , XM_013996715.2 | |
Accession Version | XM_013996715.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013996715.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852169.1 |
CDS | 183..1655 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013996715.2 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247146 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088506.1 | |
Accession Version | XM_021088506.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1656bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944165.1 |
CDS | 183..1838 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021088506.1 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247147 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088507.1 | |
Accession Version | XM_021088507.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1578bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944166.1 |
CDS | 183..1760 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021088507.1 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247148 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088508.1 | |
Accession Version | XM_021088508.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944167.1 |
CDS | 183..1736 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021088508.1 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34829 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996714.1 , XM_013996714.2 | |
Accession Version | XM_013996714.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1596bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | tripartite motif-containing protein 55 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610084.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852168.1 |
CDS | 173..1768 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013996714.1 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34829 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996714.1 , XM_013996714.2 | |
Accession Version | XM_013996714.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1596bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | tripartite motif-containing protein 55 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013996714.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852168.1 |
CDS | 183..1778 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013996714.2 |
1 | ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Porcine MuRF2 and MuRF3: molecular cloning, expression and association analysis with muscle production traits. |