SLA-6 cDNA ORF clone, Sus scrofa(pig)

Gene
Clones
gRNAs

Summary

Gene Symbol	SLA-6
Entrez Gene ID	100135037
Full Name	MHC class I antigen 6
Gene Type	protein-coding
Organism	Sus scrofa(pig)
Genome	Chromosome: 7 Map Location: 7\|7p1.1

mRNA and Protein(s)

mRNA	Protein	Name
XM_013977618.1	XP_013833072.1	MHC class I antigen 6 isoform X1
XM_013977619.1	XP_013833073.1	MHC class I antigen 6 isoform X2
XM_013977620.1	XP_013833074.1	MHC class I antigen 6 isoform X3
NM_001113704.1	NP_001107176.1	MHC class I antigen 6 precursor
XM_013977620.2	XP_013833074.2	MHC class I antigen 6 isoform X1

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Transcription specificity of the class Ib genes SLA-6, SLA-7 and SLA-8 of the swine major histocompatibility complex and comparison with class Ia genes.
Kusza S, Flori L, Gao Y, Teillaud A, Hu R, Lemonnier G, Bosze Z, Bourneuf E, Vincent-Naulleau S, Rogel-Gaillard C
Animal genetics42(5)510-20(2011 Oct)

Sequence-based characterization of the eight SLA loci in Korean native pigs.
Lee YJ, Cho KH, Kim MJ, Smith DM, Ho CS, Jung KC, Jin DI, Park CS, Jeon JT, Lee JH
International journal of immunogenetics35(4-5)333-4(2008 Aug)

PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)

Sequence and mRNA expression of nonclassical SLA class I genes SLA-7 and SLA-8.
Crew MD, Phanavanh B, Garcia-Borges CN
Immunogenetics56(2)111-4(2004 May)

PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The tissue variability of expression levels was widest for the SLA-6 gene, with a 1:32 ratio between the lowest and highest levels in contrast to a 1:12 ratio for the SLA-7 and SLA-8 genes and a 1:16 ratio for the SLA-Ia genes.
Title: Transcription specificity of the class Ib genes SLA-6, SLA-7 and SLA-8 of the swine major histocompatibility complex and comparison with class Ia genes.

The following SLA-6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SLA-6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OSe29349	NM_001113704.1 Latest version!	Sus scrofa MHC class I antigen 6 (SLA-6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OSe13396	XM_013977620.1 Latest version!	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OSe222267	XM_013977620.2 Latest version!	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OSe37784	XM_013977618.1 Latest version!	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OSe37785	XM_013977619.1 Latest version!	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SLA-6 ( NM_001113704.1 ) cDNA ORF clone, Sus scrofa(pig) -> NP_001107176.1 Sus scrofa MHC class I antigen 6 (SLA-6), mRNA.

Price & Availability↑

CloneID	OSe29349
Clone ID Related Accession (Same CDS sequence)	NM_001113704.1
Accession Version	NM_001113704.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1110bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-10-17
Organism	Sus scrofa(pig)
Product	MHC class I antigen 6 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF464007.1. ##Evidence-Data-START## Transcript exon combination :: AF464007.1, AK239694.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1876824, SAMEA1876826 [ECO:0000348] ##Evidence-Data-END##

ATGCAGGTCA CGGAGCCTCG AACCCTCCTG CTGGTGCTCT CGGGGTCCCT GGCCCTGACC 
GAGACCTGGG CAGGCCACCT TCACCACGGA CCCAAGGACC CGCGTCTGGA GAAGGGTCAG 
ACCCGGCCTC AGCCCCTCCC TGTTATAGGA TCCCACTCGC TAAGATACCT CCATATTTTG 
GTATCCCGGC CCGGCCACGG TAGTGACCTT TACAGCTCTG TCGGTTTCTT GGACGACACG 
CAGTTCGTAC GGTTCAGCAG CGATGCCGCG AATCCAAGGG TGGAGCCTCG GGCGCCGTGG 
ATGGAGCAGG AGGGGCGGGA ATATTGGGAT CGTCAGACTG ATATAGCCAA AGAACATTCG 
AAGGCTTCAA GATCGAACCT GCGGGTGATC ATTGGCAACC ACAACCATAG CCAGTCGGAG 
TCGCACAGCT TTCTTTGGGT ATCCGGCTGC GACGTGGGAT CCGAAGGGCG CATCCTTCGA 
GGGTACGAGC AGTTCTCCTA CGACGGCGAC GATTACATCG TCCTGAATGA AGACCTGCGC 
TCCTGGACCG CGATCAGTAC AGTGGCTCAG ATCATCCGGC GCAAGTGGGA GGCGGAGGGA 
GTAGCTGAAC AGTATCGGGC ATACTTGGAG ATCGAGTGTG TGGAGTGGCT CCGCAAGTAC 
CTCGAGAAGG GGAAGGACGT GCTGCAGCGC GCAGTTCCTC CAAAGACTCA TGTGACCCGC 
CACCCCTTCT ATGACAATAA AGTCACTCTA AGATGCTGGG CCCTGGGCTT CTACCCTAAG 
GAGATCTCCC TGACCTGGCA GCGTGATGGG GAGGACCAGA CCCAGGACAT GGAGCTCGTG 
GAGACCAGGC CTTCAGGGGA TGGGACCTTC CAGAAGTGGG CGGCCCTGGT GGTGCCTTCT 
GGAGAGGAGC AGAGCTACAC CTGCCAGGTG CAGCACGAGG GCCTGCAGGA GCCCCTCACC 
CTGAGATGGG AGCCACCTCC TCTGTCCCTC AACCTCATCA TGATTTGCAT TGCTGTGAGT 
GTGCTTGTGG TCACTGTGCT TGGAACTGTG ATCTGGAGAA AGAGGAACTC AGGTGGAAAT 
AGAGGGAACT ATGTTCAGGC TGCAAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001107176.1
CDS	41..1150
Translation	MQVTEPRTLLLVLSGSLALTETWAGHLHHGPKDPRLEKGQTRPQPLPVIGSHSLRYLHILVSRPGHGSDLYSSVGFLDDTQFVRFSSDAANPRVEPRAPWMEQEGREYWDRQTDIAKEHSKASRSNLRVIIGNHNHSQSESHSFLWVSGCDVGSEGRILRGYEQFSYDGDDYIVLNEDLRSWTAISTVAQIIRRKWEAEGVAEQYRAYLEIECVEWLRKYLEKGKDVLQRAVPPKTHVTRHPFYDNKVTLRCWALGFYPKEISLTWQRDGEDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQSYTCQVQHEGLQEPLTLRWEPPPLSLNLIMICIAVSVLVVTVLGTVIWRKRNSGGNRGNYVQAAS

Target ORF information:

RefSeq Version	NM_001113704.1
Organism	Sus scrofa(pig)
Definition	Sus scrofa MHC class I antigen 6 (SLA-6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001113704.1

ORF Insert Sequence:

ATGCAGGTCA CGGAGCCTCG AACCCTCCTG CTGGTGCTCT CGGGGTCCCT GGCCCTGACC 
GAGACCTGGG CAGGCCACCT TCACCACGGA CCCAAGGACC CGCGTCTGGA GAAGGGTCAG 
ACCCGGCCTC AGCCCCTCCC TGTTATAGGA TCCCACTCGC TAAGATACCT CCATATTTTG 
GTATCCCGGC CCGGCCACGG TAGTGACCTT TACAGCTCTG TCGGTTTCTT GGACGACACG 
CAGTTCGTAC GGTTCAGCAG CGATGCCGCG AATCCAAGGG TGGAGCCTCG GGCGCCGTGG 
ATGGAGCAGG AGGGGCGGGA ATATTGGGAT CGTCAGACTG ATATAGCCAA AGAACATTCG 
AAGGCTTCAA GATCGAACCT GCGGGTGATC ATTGGCAACC ACAACCATAG CCAGTCGGAG 
TCGCACAGCT TTCTTTGGGT ATCCGGCTGC GACGTGGGAT CCGAAGGGCG CATCCTTCGA 
GGGTACGAGC AGTTCTCCTA CGACGGCGAC GATTACATCG TCCTGAATGA AGACCTGCGC 
TCCTGGACCG CGATCAGTAC AGTGGCTCAG ATCATCCGGC GCAAGTGGGA GGCGGAGGGA 
GTAGCTGAAC AGTATCGGGC ATACTTGGAG ATCGAGTGTG TGGAGTGGCT CCGCAAGTAC 
CTCGAGAAGG GGAAGGACGT GCTGCAGCGC GCAGTTCCTC CAAAGACTCA TGTGACCCGC 
CACCCCTTCT ATGACAATAA AGTCACTCTA AGATGCTGGG CCCTGGGCTT CTACCCTAAG 
GAGATCTCCC TGACCTGGCA GCGTGATGGG GAGGACCAGA CCCAGGACAT GGAGCTCGTG 
GAGACCAGGC CTTCAGGGGA TGGGACCTTC CAGAAGTGGG CGGCCCTGGT GGTGCCTTCT 
GGAGAGGAGC AGAGCTACAC CTGCCAGGTG CAGCACGAGG GCCTGCAGGA GCCCCTCACC 
CTGAGATGGG AGCCACCTCC TCTGTCCCTC AACCTCATCA TGATTTGCAT TGCTGTGAGT 
GTGCTTGTGG TCACTGTGCT TGGAACTGTG ATCTGGAGAA AGAGGAACTC AGGTGGAAAT 
AGAGGGAACT ATGTTCAGGC TGCAAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SLA-6 ( XM_013977620.1 ) cDNA ORF clone, Sus scrofa(pig) -> XP_013833074.1 Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X3, mRNA.

Price & Availability↑

CloneID	OSe13396
Clone ID Related Accession (Same CDS sequence)	XM_013977620.1
Accession Version	XM_013977620.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-10
Organism	Sus scrofa(Pig)
Product	MHC class I antigen 6 isoform X3
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610614.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC AGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGAT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCA GGAGGGGCAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGGCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013833074.1
CDS	3..1034
Translation	MPVRKFSDQPNSDPPQTGRMQVTEPRTLLLVLSGSLALTETWAGHLHHGPKDPRLEKGQTRPQPLPVIGSHSLRYLHILVSRPGHGSDLYSSVGFLDDTQFVRFSSDAANPRVEPRAPWMEQEGREYWDRQTDIAKEHSKASRSNLRVIIGNHNHSQSESHSFLWVSGCDVGSDGRILRGYEQFSYDGDDYIVLNEDLRSWTAISTVAQIIRRKWEAEGVAEQYRAYLEIECVEWLRKYLEKGKDVLQRAVPPKTHVTRHPFYDNKVTLRCWALGFYPKEISLTWQQEGQDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQSYTCQVQHEGLQEPLTLRWG

Target ORF information:

RefSeq Version	XM_013977620.1
Organism	Sus scrofa(Pig)
Definition	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_013977620.1

ORF Insert Sequence:

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC AGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGAT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCA GGAGGGGCAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGGCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SLA-6 ( XM_013977620.2 ) cDNA ORF clone, Sus scrofa(pig) -> XP_013833074.2 Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OSe222267
Clone ID Related Accession (Same CDS sequence)	XM_013977620.2
Accession Version	XM_013977620.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-12
Organism	Sus scrofa(pig)
Product	MHC class I antigen 6 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013977620.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC GGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGCT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCG TGATGGGGAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGGCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013833074.2
CDS	42..1073
Translation	MPVRKFSDQPNSDPPQTGRMQVTEPRTLLLVLSGSLALTETWAGHLHHGPKDPRLEKGQTRPQPLPVIGSHSLRYLHILVSRPGHGSDLYSSVGFLDDTQFVRFSSDAANPRVEPRAPWMEQEGREYWDRQTDIAKEHSKASSSNLRVIIGNHNHSQSESHSFLWVSGCDVGSDGRILRGYEQFSYDGDDYIVLNEDLRSWTAISTVAQIIRRKWEAEGVAEQYRAYLEIECVEWLRKYLEKGKDVLQRAVPPKTHVTRHPFYDNKVTLRCWALGFYPKEISLTWQRDGEDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQSYTCQVQHEGLQEPLTLRWG

Target ORF information:

RefSeq Version	XM_013977620.2
Organism	Sus scrofa(pig)
Definition	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_013977620.2

ORF Insert Sequence:

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC GGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGCT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCG TGATGGGGAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGGCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SLA-6 ( XM_013977618.1 ) cDNA ORF clone, Sus scrofa(pig) -> XP_013833072.1 Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OSe37784
Clone ID Related Accession (Same CDS sequence)	XM_013977618.1
Accession Version	XM_013977618.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1101bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-10
Organism	Sus scrofa(Pig)
Product	MHC class I antigen 6 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610614.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC AGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGAT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCA GGAGGGGCAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGACC CTCCTATGAA TCAGGAGACG GAGGCATCTA TCCAAATATT CAGACGGGGT 
ACCTTCTCAG TGGACAATTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013833072.1
CDS	3..1103
Translation	MPVRKFSDQPNSDPPQTGRMQVTEPRTLLLVLSGSLALTETWAGHLHHGPKDPRLEKGQTRPQPLPVIGSHSLRYLHILVSRPGHGSDLYSSVGFLDDTQFVRFSSDAANPRVEPRAPWMEQEGREYWDRQTDIAKEHSKASRSNLRVIIGNHNHSQSESHSFLWVSGCDVGSDGRILRGYEQFSYDGDDYIVLNEDLRSWTAISTVAQIIRRKWEAEGVAEQYRAYLEIECVEWLRKYLEKGKDVLQRAVPPKTHVTRHPFYDNKVTLRCWALGFYPKEISLTWQQEGQDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQSYTCQVQHEGLQEPLTLRWDPPMNQETEASIQIFRRGTFSVDN

Target ORF information:

RefSeq Version	XM_013977618.1
Organism	Sus scrofa(Pig)
Definition	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_013977618.1

ORF Insert Sequence:

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC AGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGAT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCA GGAGGGGCAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGACC CTCCTATGAA TCAGGAGACG GAGGCATCTA TCCAAATATT CAGACGGGGT 
ACCTTCTCAG TGGACAATTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SLA-6 ( XM_013977619.1 ) cDNA ORF clone, Sus scrofa(pig) -> XP_013833073.1 Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X2, mRNA.

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CloneID	OSe37785
Clone ID Related Accession (Same CDS sequence)	XM_013977619.1
Accession Version	XM_013977619.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1044bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-10
Organism	Sus scrofa(Pig)
Product	MHC class I antigen 6 isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610614.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC AGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGAT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCA GGAGGGGCAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGAGC CACCTCCTCT GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013833073.1
CDS	3..1046
Translation	MPVRKFSDQPNSDPPQTGRMQVTEPRTLLLVLSGSLALTETWAGHLHHGPKDPRLEKGQTRPQPLPVIGSHSLRYLHILVSRPGHGSDLYSSVGFLDDTQFVRFSSDAANPRVEPRAPWMEQEGREYWDRQTDIAKEHSKASRSNLRVIIGNHNHSQSESHSFLWVSGCDVGSDGRILRGYEQFSYDGDDYIVLNEDLRSWTAISTVAQIIRRKWEAEGVAEQYRAYLEIECVEWLRKYLEKGKDVLQRAVPPKTHVTRHPFYDNKVTLRCWALGFYPKEISLTWQQEGQDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQSYTCQVQHEGLQEPLTLRWEPPPL

Target ORF information:

RefSeq Version	XM_013977619.1
Organism	Sus scrofa(Pig)
Definition	Sus scrofa MHC class I antigen 6 (SLA-6), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_013977619.1

ORF Insert Sequence:

ATGCCTGTTA GGAAGTTCTC AGACCAGCCA AACTCAGATC CGCCACAGAC AGGAAGGATG 
CAGGTCACGG AGCCTCGAAC CCTCCTGCTG GTGCTCTCGG GGTCCCTGGC CCTGACCGAG 
ACCTGGGCAG GCCACCTTCA CCACGGACCC AAGGACCCGC GTCTGGAGAA GGGTCAGACC 
CGGCCTCAGC CCCTCCCTGT TATAGGATCC CACTCGCTAA GATACCTCCA TATTTTGGTA 
TCCCGGCCCG GCCACGGTAG TGACCTTTAC AGCTCTGTCG GTTTCTTGGA CGACACGCAG 
TTCGTACGGT TCAGCAGCGA TGCCGCGAAT CCAAGGGTGG AGCCTCGGGC GCCGTGGATG 
GAGCAGGAGG GGCGGGAATA TTGGGATCGT CAGACTGATA TAGCCAAAGA ACATTCGAAG 
GCTTCAAGAT CGAACCTGCG GGTGATCATT GGCAACCACA ACCATAGCCA GTCGGAGTCG 
CACAGCTTTC TTTGGGTATC CGGCTGCGAC GTGGGATCCG ACGGGCGCAT CCTTCGAGGG 
TACGAGCAGT TCTCCTACGA CGGCGACGAT TACATCGTCC TGAATGAAGA CCTGCGCTCC 
TGGACCGCGA TCAGTACAGT GGCTCAGATC ATCCGGCGCA AGTGGGAGGC GGAGGGAGTA 
GCTGAACAGT ATCGGGCATA CTTGGAGATC GAGTGTGTGG AGTGGCTCCG CAAGTACCTC 
GAGAAGGGGA AGGACGTGCT GCAGCGCGCA GTTCCTCCAA AGACTCATGT GACCCGCCAC 
CCCTTCTATG ACAATAAAGT CACTCTAAGA TGCTGGGCCC TGGGCTTCTA CCCTAAGGAG 
ATCTCCCTGA CCTGGCAGCA GGAGGGGCAG GACCAGACCC AGGACATGGA GCTCGTGGAG 
ACCAGGCCTT CAGGGGATGG GACCTTCCAG AAGTGGGCGG CCCTGGTGGT GCCTTCTGGA 
GAGGAGCAGA GCTACACCTG CCAGGTGCAG CACGAGGGCC TGCAGGAGCC CCTCACCCTG 
AGATGGGAGC CACCTCCTCT GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Transcription specificity of the class Ib genes SLA-6, SLA-7 and SLA-8 of the swine major histocompatibility complex and comparison with class Ia genes.
Animal genetics42(5)510-20(2011 Oct)
Kusza S,Flori L,Gao Y,Teillaud A,Hu R,Lemonnier G,Bosze Z,Bourneuf E,Vincent-Naulleau S,Rogel-Gaillard C

Sequence-based characterization of the eight SLA loci in Korean native pigs.
International journal of immunogenetics35(4-5)333-4(2008 Aug)
Lee YJ,Cho KH,Kim MJ,Smith DM,Ho CS,Jung KC,Jin DI,Park CS,Jeon JT,Lee JH

PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Nucleic acids research35(Database issue)D650-3(2007 Jan)
Uenishi H,Eguchi-Ogawa T,Shinkai H,Okumura N,Suzuki K,Toki D,Hamasima N,Awata T

Sequence and mRNA expression of nonclassical SLA class I genes SLA-7 and SLA-8.
Immunogenetics56(2)111-4(2004 May)
Crew MD,Phanavanh B,Garcia-Borges CN

PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Nucleic acids research32(Database issue)D484-8(2004 Jan)
Uenishi H,Eguchi T,Suzuki K,Sawazaki T,Toki D,Shinkai H,Okumura N,Hamasima N,Awata T

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SLA-6 cDNA ORF clone, Sus scrofa(pig)

Gene

Clones

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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