Gene Symbol | KDM1A |
Entrez Gene ID | 100127157 |
Full Name | lysine demethylase 1A |
Synonyms | AOF2,KDM1,LSD1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » KDM1A cDNA ORF clone
Gene Symbol | KDM1A |
Entrez Gene ID | 100127157 |
Full Name | lysine demethylase 1A |
Synonyms | AOF2,KDM1,LSD1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001112687.1 | NP_001106157.1 | lysine-specific histone demethylase 1A |
XM_021093200.1 | XP_020948859.1 | lysine-specific histone demethylase 1A isoform X3 |
XM_021093199.1 | XP_020948858.1 | lysine-specific histone demethylase 1A isoform X2 |
XM_021093198.1 | XP_020948857.1 | lysine-specific histone demethylase 1A isoform X1 |
Molecular cloning, tissue expression, and analysis with genome DNA methylation of porcine LSD1 gene.
Chai J, Liu L, Xiong Q, Chen C, Peng Y, Jin W, Zheng R, Peng J, Jiang S
Applied biochemistry and biotechnology169(1)134-44(2013 Jan)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
LSD1 gene has two transcripts and is expressed in various tissues and relatively higher in ovary, kidney, and spleen.
Title: Molecular cloning, tissue expression, and analysis with genome DNA methylation of porcine LSD1 gene.
The following KDM1A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the KDM1A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe29570 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112687.1 | |
Accession Version | NM_001112687.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2622bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-28 | |
Organism | Sus scrofa(pig) | |
Product | lysine-specific histone demethylase 1A | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU219915.1. ##Evidence-Data-START## Transcript exon combination :: EU219915.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1487420, SAMEA1876824 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001106157.1 |
CDS | 60..2681 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001112687.1 |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250294 | |
Clone ID Related Accession (Same CDS sequence) | XM_021093198.1 | |
Accession Version | XM_021093198.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2634bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | lysine-specific histone demethylase 1A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948857.1 |
CDS | 149..2782 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021093198.1 |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250295 | |
Clone ID Related Accession (Same CDS sequence) | XM_021093199.1 | |
Accession Version | XM_021093199.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2574bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | lysine-specific histone demethylase 1A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948858.1 |
CDS | 149..2722 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021093199.1 |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250296 | |
Clone ID Related Accession (Same CDS sequence) | XM_021093200.1 | |
Accession Version | XM_021093200.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2562bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | lysine-specific histone demethylase 1A isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948859.1 |
CDS | 148..2709 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021093200.1 |
1 | ATGTTGTCTG GGAAGAAAGC AGCAGCCGCC GCAGCGGCGG CGGCGGCGGC GGCAGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Molecular cloning, tissue expression, and analysis with genome DNA methylation of porcine LSD1 gene. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |