Gene Symbol | BPIFB1 |
Entrez Gene ID | 100113426 |
Full Name | BPI fold containing family B member 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
Genome |
ORF » Species Summary » Sus scrofa » BPIFB1 cDNA ORF clone
Gene Symbol | BPIFB1 |
Entrez Gene ID | 100113426 |
Full Name | BPI fold containing family B member 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001101032.1 | NP_001094502.1 | BPI fold-containing family B member 1 precursor |
XM_013985229.1 | XP_013840683.1 | BPI fold-containing family B member 1 isoform X1 |
XM_005672827.3 | XP_005672884.1 | BPI fold-containing family B member 1 isoform X1 |
XM_021077173.1 | XP_020932832.1 | BPI fold-containing family B member 1 isoform X2 |
XM_005672827.2 | XP_005672884.1 | BPI fold-containing family B member 1 isoform X2 |
Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily.
Bingle CD, Seal RL, Craven CJ
Biochemical Society transactions39(4)977-83(2011 Aug)
Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family.
Bingle CD, Bingle L, Craven CJ
Biochemical Society transactions39(4)961-5(2011 Aug)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BPIFB1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BPIFB1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe28285 | |
Clone ID Related Accession (Same CDS sequence) | NM_001101032.1 | |
Accession Version | NM_001101032.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1419bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-08-24 | |
Organism | Sus scrofa(pig) | |
Product | BPI fold-containing family B member 1 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ859015.1. ##Evidence-Data-START## Transcript exon combination :: DQ859015.1, AK238078.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1876824, SAMEA1876826 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCCAACC CTCGGATCTT CACCTTCCTC TGTGGTTTGC TGGCCACCCA CCTGGTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001094502.1 |
CDS | 93..1511 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001101032.1 |
1 | ATGGCCAACC CTCGGATCTT CACCTTCCTC TGTGGTTTGC TGGCCACCCA CCTGGTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe24857 | |
Clone ID Related Accession (Same CDS sequence) | XM_005672827.3 , XM_005672827.2 | |
Accession Version | XM_005672827.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | BPI fold-containing family B member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010459.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005672827.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTCTAC TACCTGCCAC CTGCTACGAA CCCACCCTGG AGAAGATGGC CAACCCTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005672884.1 |
CDS | 138..1601 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005672827.3 |
1 | ATGTTTCTAC TACCTGCCAC CTGCTACGAA CCCACCCTGG AGAAGATGGC CAACCCTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe24857 | |
Clone ID Related Accession (Same CDS sequence) | XM_005672827.3 , XM_005672827.2 | |
Accession Version | XM_005672827.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | BPI fold-containing family B member 1 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612563.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005672827.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTCTAC TACCTGCCAC CTGCTACGAA CCCACCCTGG AGAAGATGGC CAACCCTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005672884.1 |
CDS | 715..2178 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005672827.2 |
1 | ATGTTTCTAC TACCTGCCAC CTGCTACGAA CCCACCCTGG AGAAGATGGC CAACCCTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe240869 | |
Clone ID Related Accession (Same CDS sequence) | XM_021077173.1 | |
Accession Version | XM_021077173.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1419bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | BPI fold-containing family B member 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010459.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAACC CTCGGATCTT CACCTTCCTC TGTGGTTTGC TGGCCACCCA CCTGGTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020932832.1 |
CDS | 184..1602 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021077173.1 |
1 | ATGGCCAACC CTCGGATCTT CACCTTCCTC TGTGGTTTGC TGGCCACCCA CCTGGTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe44801 | |
Clone ID Related Accession (Same CDS sequence) | XM_013985229.1 | |
Accession Version | XM_013985229.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | BPI fold-containing family B member 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612563.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCCCAC GGGAATGGCT GCACAGGAGG CAGGGAGCCC CTTGTACGAG CCACACTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013840683.1 |
CDS | 633..2408 |
Translation |
Target ORF information:
Target ORF information:
|
XM_013985229.1 |
1 | ATGTCCCCAC GGGAATGGCT GCACAGGAGG CAGGGAGCCC CTTGTACGAG CCACACTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. |
Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |