| Gene Symbol | AG1 |
| Entrez Gene ID | 543840 |
| Full Name | MADS-box transcription factor AGAMOUS |
| Synonyms | AG1 |
| Gene Type | protein-coding |
| Organism | Solanum lycopersicum(Lycopersicon esculentum) |
ORF » Species Summary » Solanum lycopersicum » AG1 cDNA ORF clone
| Gene Symbol | AG1 |
| Entrez Gene ID | 543840 |
| Full Name | MADS-box transcription factor AGAMOUS |
| Synonyms | AG1 |
| Gene Type | protein-coding |
| Organism | Solanum lycopersicum(Lycopersicon esculentum) |
| mRNA | Protein | Name |
|---|---|---|
| XM_019211973.1 | XP_019067518.1 | floral homeotic protein AGAMOUS isoform X1 |
| NM_001308296.2 | NP_001295225.1 | floral homeotic protein AGAMOUS isoform 1 |
| XM_019211974.1 | XP_019067519.1 | floral homeotic protein AGAMOUS isoform X2 |
| NM_001279252.2 | NP_001266181.1 | floral homeotic protein AGAMOUS isoform 2 |
The Epigenome and Transcriptional Dynamics of Fruit Ripening.
Giovannoni J, Nguyen C, Ampofo B, Zhong S, Fei Z
Annual review of plant biology6861-84(2017 Apr)
TOMATO AGAMOUS1 and ARLEQUIN/TOMATO AGAMOUS-LIKE1 MADS-box genes have redundant and divergent functions required for tomato reproductive development.
Gimenez E, Casta?eda L, Pineda B, Pan IL, Moreno V, Angosto T, Lozano R
Plant molecular biology91(4-5)513-31(2016 Jul)
Transcriptional regulation of fruit ripening by tomato FRUITFULL homologs and associated MADS box proteins.
Fujisawa M, Shima Y, Nakagawa H, Kitagawa M, Kimbara J, Nakano T, Kasumi T, Ito Y
The Plant cell26(1)89-101(2014 Jan)
The tomato MADS-box transcription factor RIPENING INHIBITOR interacts with promoters involved in numerous ripening processes in a COLORLESS NONRIPENING-dependent manner.
Martel C, Vrebalov J, Tafelmeyer P, Giovannoni JJ
Plant physiology157(3)1568-79(2011 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
both redundant and divergent functions of TAG1 and TAGL1 genes are needed to control tomato reproductive development.
Title: TOMATO AGAMOUS1 and ARLEQUIN/TOMATO AGAMOUS-LIKE1 MADS-box genes have redundant and divergent functions required for tomato reproductive development.
The following AG1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AG1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSo108236 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001279252.2 | |
| Accession Version | NM_001279252.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 747bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-22 | |
| Organism | Solanum lycopersicum(Lycopersicon esculentum) | |
| Product | floral homeotic protein AGAMOUS isoform 2 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AEKE03003138.1. On May 7, 2015 this sequence version replaced NM_001279252.1. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: L26295.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN04002490, SAMN06134382 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001266181.1 |
| CDS | 145..891 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001279252.2 |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSo108238 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001308296.2 | |
| Accession Version | NM_001308296.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-22 | |
| Organism | Solanum lycopersicum(Lycopersicon esculentum) | |
| Product | floral homeotic protein AGAMOUS isoform 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AEKE03003138.1. On May 7, 2015 this sequence version replaced NM_001308296.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK321013.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN04002490, SAMN06134382 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001295225.1 |
| CDS | 145..894 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001308296.2 |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSo82143 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019211973.1 | |
| Accession Version | XM_019211973.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 705bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-08-07 | |
| Organism | Solanum lycopersicum(Lycopersicon esculentum) | |
| Product | floral homeotic protein AGAMOUS isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_015439.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Solanum lycopersicum Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019067518.1 |
| CDS | 347..1051 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019211973.1 |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSo82144 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019211974.1 | |
| Accession Version | XM_019211974.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 663bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-08-07 | |
| Organism | Solanum lycopersicum(Lycopersicon esculentum) | |
| Product | floral homeotic protein AGAMOUS isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_015439.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Solanum lycopersicum Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019067519.1 |
| CDS | 347..1009 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019211974.1 |
1 | ATGGACTTCC AAAGTGATCT AACCAGAGAG ATCTCACCAC AAAGGAAACT AGGAAGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Epigenome and Transcriptional Dynamics of Fruit Ripening. |
TOMATO AGAMOUS1 and ARLEQUIN/TOMATO AGAMOUS-LIKE1 MADS-box genes have redundant and divergent functions required for tomato reproductive development. |
Transcriptional regulation of fruit ripening by tomato FRUITFULL homologs and associated MADS box proteins. |
The tomato MADS-box transcription factor RIPENING INHIBITOR interacts with promoters involved in numerous ripening processes in a COLORLESS NONRIPENING-dependent manner. |