Gene Symbol | RRP40 |
Entrez Gene ID | 854023 |
Full Name | exosome non-catalytic core subunit RRP40 |
Synonyms | MTR14 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » RRP40 cDNA ORF clone
Gene Symbol | RRP40 |
Entrez Gene ID | 854023 |
Full Name | exosome non-catalytic core subunit RRP40 |
Synonyms | MTR14 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001183396.2 | NP_014499.2 | exosome non-catalytic core subunit RRP40 |
Caenorhabditis elegans (roundworm) | exos-3 | NP_492751.1 |
Eremothecium gossypii | AGOS_ADL196W | NP_983900.2 |
Schizosaccharomyces pombe (fission yeast) | SPAC22A12.12c | NP_593242.1 |
Bos taurus (cattle) | EXOSC3 | NP_001030474.1 |
Rattus norvegicus (Norway rat) | Exosc3 | NP_001101406.1 |
Saccharomyces cerevisiae (baker's yeast) | RRP40 | NP_014499.2 |
Neurospora crassa | NCU00693 | XP_965833.1 |
Canis lupus familiaris (dog) | EXOSC3 | XP_538738.1 |
Mus musculus (house mouse) | Exosc3 | NP_079789.1 |
Gallus gallus (chicken) | EXOSC3 | NP_001186445.1 |
Danio rerio (zebrafish) | exosc3 | NP_001025132.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010247 | XP_319438.3 |
Kluyveromyces lactis | KLLA0E02091g | XP_454042.1 |
EXOSC3 | XP_001114719.1 | |
Arabidopsis thaliana (thale cress) | AT4G32175 | NP_680755.2 |
Arabidopsis thaliana (thale cress) | AT2G25355 | NP_565592.1 |
Oryza sativa (rice) | Os01g0661400 | NP_001043778.1 |
Homo sapiens (human) | EXOSC3 | NP_057126.2 |
Pan troglodytes (chimpanzee) | EXOSC3 | XP_520587.2 |
Drosophila melanogaster (fruit fly) | Rrp40 | NP_722725.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02843 | XP_003720894.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100491278 | XP_002936379.2 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.
Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, Arino J, Benes V, Bohn C, Bolotin-Fukuhara M, Bordonn? R, Boyer J, Camasses A, Casamayor A, Casas C, Ch?ret G, Cziepluch C, Daignan-Fornier B, Dang DV, de Haan M, Delius H, Durand P, Fairhead C, Feldmann H, Gaillon L, Kleine K
Nature387(6632 Suppl)98-102(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Mutations of EXOSC3/Rrp40p associated with pontocerebellar hypoplasia with progressive cerebral atrophy impact ribosomal RNA processing functions of the exosome in S. cerevisiae.
Title: Mutations of EXOSC3/Rrp40p associated with neurological diseases impact ribosomal RNA processing functions of the exosome in
The three cap proteins (Csl4, Rrp4 and Rrp40) and the nuclease (Rrp44) are multidomain proteins with the expected conformational variability.
Title: Structure determination of an 11-subunit exosome in complex with RNA by molecular replacement.
We present the crystal structure of the Rrp40 exosome subunit from Saccharomyces cerevisiae at a resolution of 2.2 A.
Title: Structural and biochemical characterization of the yeast exosome component Rrp40.
The following RRP40 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RRP40 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi03195 | |
Clone ID Related Accession (Same CDS sequence) | NM_001183396.2 | |
Accession Version | NM_001183396.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | exosome non-catalytic core subunit RRP40 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001147). On Apr 26, 2011 this sequence version replaced NM_001183396.1. ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGTCTACGT TCATATTCCC TGGTGATAGC TTTCCTGTAG ACCCTACTAC ACCTGTTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_014499.2 |
CDS | 1..723 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001183396.2 |
1 | ATGTCTACGT TCATATTCCC TGGTGATAGC TTTCCTGTAG ACCCTACTAC ACCTGTTAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. |
Life with 6000 genes. |