Gene Symbol | LSM2 |
Entrez Gene ID | 852255 |
Full Name | Sm-like protein LSM2 |
Synonyms | SMX5,SNP3 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » LSM2 cDNA ORF clone
Gene Symbol | LSM2 |
Entrez Gene ID | 852255 |
Full Name | Sm-like protein LSM2 |
Synonyms | SMX5,SNP3 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001178266.1 | NP_009527.1 | Sm-like protein LSM2 |
Pan troglodytes (chimpanzee) | LSM2 | XP_518362.3 |
Rattus norvegicus (Norway rat) | Lsm2 | NP_001004073.1 |
Caenorhabditis elegans (roundworm) | gut-2 | NP_001256511.1 |
Neurospora crassa | NCU07382 | XP_958875.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005136 | XP_314020.2 |
Saccharomyces cerevisiae (baker's yeast) | LSM2 | NP_009527.1 |
Schizosaccharomyces pombe (fission yeast) | lsm2 | NP_588459.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_00355 | XP_003718727.1 |
Homo sapiens (human) | LSM2 | NP_067000.1 |
LSM2 | XP_001105870.1 | |
Danio rerio (zebrafish) | smx5 | NP_571571.1 |
Kluyveromyces lactis | KLLA0F09207g | XP_455499.1 |
Canis lupus familiaris (dog) | LOC474849 | XP_532081.3 |
Mus musculus (house mouse) | Lsm2 | NP_085100.1 |
Drosophila melanogaster (fruit fly) | CG10418 | NP_648570.1 |
Eremothecium gossypii | AGOS_AFR182C | NP_985729.1 |
Arabidopsis thaliana (thale cress) | AT1G03330 | NP_563682.1 |
Bos taurus (cattle) | LSM2 | NP_001094647.1 |
Oryza sativa (rice) | Os08g0154700 | NP_001061016.2 |
Xenopus tropicalis (tropical clawed frog) | lsm2 | NP_001016402.1 |
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
Complete DNA sequence of yeast chromosome II.
Feldmann H, Aigle M, Aljinovic G, Andr? B, Baclet MC, Barthe C, Baur A, B?cam AM, Biteau N, Boles E, Brandt T, Brendel M, Br?ckner M, Bussereau F, Christiansen C, Contreras R, Crouzet M, Cziepluch C, D?molis N, Delaveau T, Doignon F, Domdey H, D?sterhus S, Dubois E, Dujon B, El Bakkoury M, Entian KD, Feurmann M, Fiers W, Fobo GM, Fritz C, Gassenhuber H, Glandsdorff N, Goffeau A, Grivell LA, de Haan M, Hein C, Herbert CJ, Hollenberg CP, Holmstr?m K, Jacq C, Jacquet M, Jauniaux JC, Jonniaux JL, Kalles?e T, Kiesau P, Kirchrath L, K?tter P, Korol S, Liebl S, Logghe M, Lohan AJ, Louis EJ, Li ZY, Maat MJ, Mallet L, Mannhaupt G, Messenguy F, Miosga T, Molemans F, M?ller S, Nasr F, Obermaier B, Perea J, Pi?rard A, Piravandi E, Pohl FM, Pohl TM, Potier S, Proft M, Purnelle B, Ramezani Rad M, Rieger M, Rose M, Schaaff-Gerstenschl?ger I, Scherens B, Schwarzlose C, Skala J, Slonimski PP, Smits PH, Souciet JL, Steensma HY, Stucka R, Urrestarazu A, van der Aart QJ, van Dyck L, Vassarotti A, Vetter I, Vierendeels F, Vissers S, Wagner G, de Wergifosse P, Wolfe KH, Zagulski M, Zimmermann FK, Mewes HW, Kleine K
The EMBO journal13(24)5795-809(1994 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The C-terminal helix of Lsm2 intreacting with the structure of the C-terminal domain of Pat1 suggests a potential mechanism for RNA binding that involves the helix and loop faces of the Lsm1-7 ring.
Title: Lsm2 and Lsm3 bridge the interaction of the Lsm1-7 complex with Pat1 for decapping activation.
Lsm2-8p complex normally targets nuclear RNA substrates for decapping
Title: Nuclear pre-mRNA decapping and 5' degradation in yeast require the Lsm2-8p complex.
an Lsm2-Lsm7 protein complex resides in nucleoli, contributing to the biogenesis or function of specific snoRNAs
Title: An Lsm2-Lsm7 complex in Saccharomyces cerevisiae associates with the small nucleolar RNA snR5.
The following LSM2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LSM2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi01684 | |
Clone ID Related Accession (Same CDS sequence) | NM_001178266.1 | |
Accession Version | NM_001178266.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 288bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | Sm-like protein LSM2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001134). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGCTTTTCT TCTCCTTTTT CAAGACTTTA GTTGACCAAG AAGTGGTCGT AGAGTTAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_009527.1 |
CDS | 1..288 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001178266.1 |
1 | ATGCTTTTCT TCTCCTTTTT CAAGACTTTA GTTGACCAAG AAGTGGTCGT AGAGTTAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Life with 6000 genes. |
Complete DNA sequence of yeast chromosome II. |