Gene Symbol | CBF5 |
Entrez Gene ID | 850872 |
Full Name | pseudouridine synthase CBF5 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » CBF5 cDNA ORF clone
Gene Symbol | CBF5 |
Entrez Gene ID | 850872 |
Full Name | pseudouridine synthase CBF5 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001182062.1 | NP_013276.1 | pseudouridine synthase CBF5 |
DKC1 | XP_001090867.2 | |
Mus musculus (house mouse) | Dkc1 | NP_001025478.1 |
Gallus gallus (chicken) | DKC1 | NP_001026286.1 |
Caenorhabditis elegans (roundworm) | K01G5.5 | NP_499370.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_07518 | XP_003711432.1 |
Oryza sativa (rice) | Os07g0636000 | NP_001060391.1 |
Rattus norvegicus (Norway rat) | Dkc1 | NP_596910.1 |
Drosophila melanogaster (fruit fly) | Nop60B | NP_001163289.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004739 | XP_318082.4 |
Kluyveromyces lactis | KLLA0D04796g | XP_453273.1 |
Eremothecium gossypii | AGOS_AAL007C | NP_982535.1 |
Pan troglodytes (chimpanzee) | DKC1 | XP_521345.3 |
Bos taurus (cattle) | DKC1 | NP_001098865.1 |
Saccharomyces cerevisiae (baker's yeast) | CBF5 | NP_013276.1 |
Neurospora crassa | NCU01290 | XP_960827.1 |
Arabidopsis thaliana (thale cress) | NAP57 | NP_191274.1 |
Xenopus tropicalis (tropical clawed frog) | dkc1 | XP_004916830.1 |
Canis lupus familiaris (dog) | DKC1 | XP_549382.2 |
Danio rerio (zebrafish) | dkc1 | NP_001028279.2 |
Schizosaccharomyces pombe (fission yeast) | cbf5 | NP_594878.1 |
Oryza sativa (rice) | Os03g0370500 | NP_001050199.1 |
Homo sapiens (human) | DKC1 | NP_001354.1 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII.
Johnston M, Hillier L, Riles L, Albermann K, Andr? B, Ansorge W, Benes V, Br?ckner M, Delius H, Dubois E, D?sterh?ft A, Entian KD, Floeth M, Goffeau A, Hebling U, Heumann K, Heuss-Neitzel D, Hilbert H, Hilger F, Kleine K, K?tter P, Louis EJ, Messenguy F, Mewes HW, Hoheisel JD
Nature387(6632 Suppl)87-90(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
rRNA pseudouridylation defects resulted from a deficient pseudouridylate synthetase affect ribosomal ligand binding and translational fidelity from yeast to human cells.
Title: rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells.
The authors demonstrate that Shq1p binds the pseudourydilating enzyme Cbf5p through the C-terminal domain, in synergy with the N-terminal domain.
Title: The box H/ACA snoRNP assembly factor Shq1p is a chaperone protein homologous to Hsp90 cochaperones that binds to the Cbf5p enzyme.
box H/ACA RNP assembly factor Naf1p contains a domain homologous to Gar1p mediating its interaction with Cbf5p
Title: The box H/ACA RNP assembly factor Naf1p contains a domain homologous to Gar1p mediating its interaction with Cbf5p.
two molecules of Cbf5p interact with a binding platform constituted by the 5' end of the RNA, the single-stranded hinge domain containing the conserved H box, and the 3' end of the molecule, including the conserved ACA box
Title: Analysis of the binding of the N-terminal conserved domain of yeast Cbf5p to a box H/ACA snoRNA.
The following CBF5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CBF5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi00514 | |
Clone ID Related Accession (Same CDS sequence) | NM_001182062.1 | |
Accession Version | NM_001182062.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1452bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | pseudouridine synthase CBF5 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001144). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGTCAAAGG AGGATTTCGT TATTAAGCCT GAAGCTGCAG GTGCTTCCAC TGACACTAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_013276.1 |
CDS | 1..1452 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001182062.1 |
1 | ATGTCAAAGG AGGATTTCGT TATTAAGCCT GAAGCTGCAG GTGCTTCCAC TGACACTAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII. |
Life with 6000 genes. |