IXR1 cDNA ORF clone, Saccharomyces cerevisiae S288C

Gene
Clones
gRNAs

Summary

Gene Symbol	IXR1
Entrez Gene ID	853836
Full Name	DNA-binding transcription repressor IXR1
Synonyms	ORD1
Gene Type	protein-coding
Organism	Saccharomyces cerevisiae S288C

mRNA and Protein(s)

mRNA	Protein	Name
NM_001179598.3	NP_012893.3	DNA-binding transcription repressor IXR1

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)

Complete DNA sequence of yeast chromosome XI.
Dujon B, Alexandraki D, Andr? B, Ansorge W, Baladron V, Ballesta JP, Banrevi A, Bolle PA, Bolotin-Fukuhara M, Bossier P, Bou G, Boyer J, Bultrago MJ, Cheret G, Colleaux L, Dalgnan-Fornler B, del Rey F, Dlon C, Domdey H, D?sterhoft A, D?sterhus S, Entlan KD, Erfle H, Esteban PF, Feldmann H, Fernandes L, Robo GM, Fritz C, Fukuhara H, Gabel C, Gaillon L, Carcia-Cantalejo JM, Garcia-Ramirez JJ, Gent NE, Ghazvini M, Goffeau A, Gonzal?z A, Grothues D, Guerreiro P, Hegemann J, Hewitt N, Hilger F, Hollenberg CP, Horaitis O, Indge KJ, Jacquier A, James CM, Jauniaux C, Jimenez A, Keuchel H, Kirchrath L, Kleine K, K?tter P, Legrain P, Liebl S, Louis EJ, Maia e Silva A, Marck C, Monnier AL, M?stl D, M?ller S, Obermaier B, Oliver SG, Pallier C, Pascolo S, Pfeiffer F, Philippsen P, Planta RJ, Pohl FM, Pohl TM, P?hlmann R, Portetelle D, Purnelle B, Puzos V, Ramezani Rad M, Rasmussen SW, Remacha M, Revuelta JL, Richard GF, Rieger M, Rodrigues-Pousada C, Rose M, Rupp T, Santos MA, Schwager C, Sensen C, Skala J, Soares H, Sor F, Stegemann J, Tettelin H, Thierry A, Tzermia M, Urrestarazu LA, van Dyck L, Van Vliet-Reedijk JC, Valens M, Vandenbo M, Vilela C, Vissers S, von Wettstein D, Voss H, Wiemann S, Xu G, Zimmermann J, Haasemann M, Becker I, Mewes HW
Nature369(6479)371-8(1994 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Ixr1 differentially regulated genes related to the hypoxic and oxidative stress responses.
Title: Ixr1p and the control of the Saccharomyces cerevisiae hypoxic response.

the combined activity of the Hmo 1 and the Ixr1 proteins provides efficient correction of both repair and replication errors.
Title: [IXR1 and HMO1 genes jointly control the level of spontaneous mutagenesis in yeast Saccharomyces cerevisiae].

Ixr1p is necessary for the high expression of HEM13 under hypoxic conditions and its function is exerted in vivo through the HEM13 promoter region extending from -577 to -419.
Title: Ixr1p regulates oxygen-dependent HEM13 transcription.

Data show that transcriptional adaptation from aerobiosis to hypoxia depends on ROX1 and IXR1 cross-regulation.
Title: Regulatory factors controlling transcription of Saccharomyces cerevisiae IXR1 by oxygen levels: a model of transcriptional adaptation from aerobiosis to hypoxia implicating ROX1 and IXR1 cross-regulation.

The following IXR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IXR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSi03027	NM_001179598.3 Latest version!	Saccharomyces cerevisiae S288C DNA-binding transcription repressor IXR1 (IXR1), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

IXR1 ( NM_001179598.3 ) cDNA ORF clone, Saccharomyces cerevisiae S288C -> NP_012893.3 Saccharomyces cerevisiae S288C DNA-binding transcription repressor IXR1 (IXR1), partial mRNA.

Price & Availability↑

CloneID	OSi03027
Clone ID Related Accession (Same CDS sequence)	NM_001179598.3
Accession Version	NM_001179598.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-31
Organism	Saccharomyces cerevisiae S288C
Product	DNA-binding transcription repressor IXR1
Comment	Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001143). On Jul 30, 2012 this sequence version replaced NM_001179598.2. ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.

ATGAACACCG GTATCTCGCC CAAACAGGAC GACGCCTCTA ACTCCAACTT ACTCAACATA 
GGCCAAGACC ATTCGCTGCA GTATCAGGGT CTCGAACACA ACGACTCCCA GTACAGAGAT 
GCTTCTCACC AGACACCTCA CCAATACTTG AACCAGTTTC AAGCCCAGCC TCAACAACAA 
CAACAGCAGC AGCAGCAGCA ACAACAGCAA CAACAACAAG CGCCTTATCA AGGTCACTTC 
CAGCAGTCGC CTCAACAACA ACAGCAAAAT GTTTATTATC CACTACCTCC ACAATCTTTG 
ACGCAACCTA CTTCGCAGTC GCAACAACAA CAACAGCAAC AACAACAACA ACAGTATGCT 
AATTCGAACT CAAATTCAAA CAACAATGTT AATGTTAACG CGCTACCTCA GGATTTCGGT 
TACATGCAAC AAACCGGATC GGGCCAAAAC TATCCGACGA TCAATCAACA ACAATTTTCC 
GAGTTTTACA ACTCCTTTTT AAGTCATTTA ACTCAAAAAC AGACAAACCC TTCTGTCACG 
GGTACAGGCG CGTCTAGTAA CAACAACAGT AACAACAACA ATGTTAGTAG CGGCAATAAC 
AGCACTAGCA GTAATCCTGC CCAGCTGGCA GCCTCCCAAT TAAACCCTGC CACGGCTGCT 
GCGGCCGCCG CAAACAATGC TGCTGGCCCG GCTTCGTACT TGTCTCAGCT CCCACAGGTG 
CAGAGATACT ACCCGAACAA CATGAACGCT CTGTCTAGTC TTTTGGACCC TTCCTCTGCA 
GGAAATGCTG CAGGAAATGC CAACACCGCT ACTCATCCTG GTTTGTTACC ACCCAATCTG 
CAACCTCAAT TGACTCACCA CCAGCAGCAG ATGCAGCAAC AGCTGCAATT ACAACAACAA 
CAGCAGTTGC AGCAACAGCA GCAGCTACAA CAGCAACACC AGTTGCAACA ACAACAACAA 
CTTCAACAAC AACATCATCA TCTACAACAG CAACAGCAGC AACAACAGCA TCCAGTGGTG 
AAGAAATTAT CTTCCACTCA AAGCAGAATT GAGAGAAGAA AACAACTGAA AAAGCAAGGC 
CCAAAGAGAC CTTCTTCCGC TTATTTCCTG TTTTCTATGT CCATAAGAAA TGAGTTGCTT 
CAACAATTCC CTGAAGCAAA GGTCCCCGAA TTGTCTAAAT TGGCTTCTGC AAGGTGGAAA 
GAGTTAACGG ATGATCAAAA AAAACCATTC TACGAAGAAT TCAGAACCAA CTGGGAGAAG 
TACAGAGTTG TGAGAGATGC TTACGAAAAG ACTTTGCCCC CAAAGAGACC CTCTGGTCCC 
TTTATTCAGT TCACCCAGGA GATTAGACCT ACCGTCGTCA AGGAAAATCC TGATAAAGGT 
TTAATCGAAA TTACCAAGAT AATCGGTGAA AGATGGCGCG AGTTAGACCC TGCCAAAAAG 
GCGGAATACA CTGAAACTTA CAAGAAAAGA TTAAAGGAAT GGGAAAGTTG TTATCCCGAC 
GAAAATGATC CAAACGGTAA CCCAACCGGT CACTCACATA AGGCCATGAA CATGAATTTG 
AATATGGACA CTAAAATCAT GGAGAACCAA GACAGTATCG AGCACATAAC CGCAAATGCC 
ATCGACTCAG TTACCGGAAG CAACAGTAAC AGTACCAACC CAAATACGCC CGTTTCTCCT 
CCGATTTCAT TACAGCAGCA GCCGCTCCAA CAACAACAAC AACAGCAGCA ACAACAACAA 
CACATGTTAT TGGCTGACCC CACTACAAAT GGTTCGATCA TAAAAAATGA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_012893.3
CDS	1..1794
Translation	MNTGISPKQDDASNSNLLNIGQDHSLQYQGLEHNDSQYRDASHQTPHQYLNQFQAQPQQQQQQQQQQQQQQQQAPYQGHFQQSPQQQQQNVYYPLPPQSLTQPTSQSQQQQQQQQQQQYANSNSNSNNNVNVNALPQDFGYMQQTGSGQNYPTINQQQFSEFYNSFLSHLTQKQTNPSVTGTGASSNNNSNNNNVSSGNNSTSSNPAQLAASQLNPATAAAAAANNAAGPASYLSQLPQVQRYYPNNMNALSSLLDPSSAGNAAGNANTATHPGLLPPNLQPQLTHHQQQMQQQLQLQQQQQLQQQQQLQQQHQLQQQQQLQQQHHHLQQQQQQQQHPVVKKLSSTQSRIERRKQLKKQGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKKRLKEWESCYPDENDPNGNPTGHSHKAMNMNLNMDTKIMENQDSIEHITANAIDSVTGSNSNSTNPNTPVSPPISLQQQPLQQQQQQQQQQQHMLLADPTTNGSIIKNE

Target ORF information:

RefSeq Version	NM_001179598.3
Organism	Saccharomyces cerevisiae S288C
Definition	Saccharomyces cerevisiae S288C DNA-binding transcription repressor IXR1 (IXR1), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001179598.3

ORF Insert Sequence:

ATGAACACCG GTATCTCGCC CAAACAGGAC GACGCCTCTA ACTCCAACTT ACTCAACATA 
GGCCAAGACC ATTCGCTGCA GTATCAGGGT CTCGAACACA ACGACTCCCA GTACAGAGAT 
GCTTCTCACC AGACACCTCA CCAATACTTG AACCAGTTTC AAGCCCAGCC TCAACAACAA 
CAACAGCAGC AGCAGCAGCA ACAACAGCAA CAACAACAAG CGCCTTATCA AGGTCACTTC 
CAGCAGTCGC CTCAACAACA ACAGCAAAAT GTTTATTATC CACTACCTCC ACAATCTTTG 
ACGCAACCTA CTTCGCAGTC GCAACAACAA CAACAGCAAC AACAACAACA ACAGTATGCT 
AATTCGAACT CAAATTCAAA CAACAATGTT AATGTTAACG CGCTACCTCA GGATTTCGGT 
TACATGCAAC AAACCGGATC GGGCCAAAAC TATCCGACGA TCAATCAACA ACAATTTTCC 
GAGTTTTACA ACTCCTTTTT AAGTCATTTA ACTCAAAAAC AGACAAACCC TTCTGTCACG 
GGTACAGGCG CGTCTAGTAA CAACAACAGT AACAACAACA ATGTTAGTAG CGGCAATAAC 
AGCACTAGCA GTAATCCTGC CCAGCTGGCA GCCTCCCAAT TAAACCCTGC CACGGCTGCT 
GCGGCCGCCG CAAACAATGC TGCTGGCCCG GCTTCGTACT TGTCTCAGCT CCCACAGGTG 
CAGAGATACT ACCCGAACAA CATGAACGCT CTGTCTAGTC TTTTGGACCC TTCCTCTGCA 
GGAAATGCTG CAGGAAATGC CAACACCGCT ACTCATCCTG GTTTGTTACC ACCCAATCTG 
CAACCTCAAT TGACTCACCA CCAGCAGCAG ATGCAGCAAC AGCTGCAATT ACAACAACAA 
CAGCAGTTGC AGCAACAGCA GCAGCTACAA CAGCAACACC AGTTGCAACA ACAACAACAA 
CTTCAACAAC AACATCATCA TCTACAACAG CAACAGCAGC AACAACAGCA TCCAGTGGTG 
AAGAAATTAT CTTCCACTCA AAGCAGAATT GAGAGAAGAA AACAACTGAA AAAGCAAGGC 
CCAAAGAGAC CTTCTTCCGC TTATTTCCTG TTTTCTATGT CCATAAGAAA TGAGTTGCTT 
CAACAATTCC CTGAAGCAAA GGTCCCCGAA TTGTCTAAAT TGGCTTCTGC AAGGTGGAAA 
GAGTTAACGG ATGATCAAAA AAAACCATTC TACGAAGAAT TCAGAACCAA CTGGGAGAAG 
TACAGAGTTG TGAGAGATGC TTACGAAAAG ACTTTGCCCC CAAAGAGACC CTCTGGTCCC 
TTTATTCAGT TCACCCAGGA GATTAGACCT ACCGTCGTCA AGGAAAATCC TGATAAAGGT 
TTAATCGAAA TTACCAAGAT AATCGGTGAA AGATGGCGCG AGTTAGACCC TGCCAAAAAG 
GCGGAATACA CTGAAACTTA CAAGAAAAGA TTAAAGGAAT GGGAAAGTTG TTATCCCGAC 
GAAAATGATC CAAACGGTAA CCCAACCGGT CACTCACATA AGGCCATGAA CATGAATTTG 
AATATGGACA CTAAAATCAT GGAGAACCAA GACAGTATCG AGCACATAAC CGCAAATGCC 
ATCGACTCAG TTACCGGAAG CAACAGTAAC AGTACCAACC CAAATACGCC CGTTTCTCCT 
CCGATTTCAT TACAGCAGCA GCCGCTCCAA CAACAACAAC AACAGCAGCA ACAACAACAA 
CACATGTTAT TGGCTGACCC CACTACAAAT GGTTCGATCA TAAAAAATGA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Life with 6000 genes.
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
Goffeau A,Barrell BG,Bussey H,Davis RW,Dujon B,Feldmann H,Galibert F,Hoheisel JD,Jacq C,Johnston M,Louis EJ,Mewes HW,Murakami Y,Philippsen P,Tettelin H,Oliver SG

Complete DNA sequence of yeast chromosome XI.
Nature369(6479)371-8(1994 Jun)
Dujon B,Alexandraki D,Andr? B,Ansorge W,Baladron V,Ballesta JP,Banrevi A,Bolle PA,Bolotin-Fukuhara M,Bossier P,Bou G,Boyer J,Bultrago MJ,Cheret G,Colleaux L,Dalgnan-Fornler B,del Rey F,Dlon C,Domdey H,D?sterhoft A,D?sterhus S,Entlan KD,Erfle H,Esteban PF,Feldmann H,Fernandes L,Robo GM,Fritz C,Fukuhara H,Gabel C,Gaillon L,Carcia-Cantalejo JM,Garcia-Ramirez JJ,Gent NE,Ghazvini M,Goffeau A,Gonzal?z A,Grothues D,Guerreiro P,Hegemann J,Hewitt N,Hilger F,Hollenberg CP,Horaitis O,Indge KJ,Jacquier A,James CM,Jauniaux C,Jimenez A,Keuchel H,Kirchrath L,Kleine K,K?tter P,Legrain P,Liebl S,Louis EJ,Maia e Silva A,Marck C,Monnier AL,M?stl D,M?ller S,Obermaier B,Oliver SG,Pallier C,Pascolo S,Pfeiffer F,Philippsen P,Planta RJ,Pohl FM,Pohl TM,P?hlmann R,Portetelle D,Purnelle B,Puzos V,Ramezani Rad M,Rasmussen SW,Remacha M,Revuelta JL,Richard GF,Rieger M,Rodrigues-Pousada C,Rose M,Rupp T,Santos MA,Schwager C,Sensen C,Skala J,Soares H,Sor F,Stegemann J,Tettelin H,Thierry A,Tzermia M,Urrestarazu LA,van Dyck L,Van Vliet-Reedijk JC,Valens M,Vandenbo M,Vilela C,Vissers S,von Wettstein D,Voss H,Wiemann S,Xu G,Zimmermann J,Haasemann M,Becker I,Mewes HW

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IXR1 cDNA ORF clone, Saccharomyces cerevisiae S288C

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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