Gene Symbol | DEG1 |
Entrez Gene ID | 850550 |
Full Name | pseudouridine synthase DEG1 |
Synonyms | HRM3,PUS3 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » DEG1 cDNA ORF clone
Gene Symbol | DEG1 |
Entrez Gene ID | 850550 |
Full Name | pseudouridine synthase DEG1 |
Synonyms | HRM3,PUS3 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001179965.1 | NP_116655.1 | pseudouridine synthase DEG1 |
Canis lupus familiaris (dog) | PUS3 | XP_536533.1 |
Caenorhabditis elegans (roundworm) | tag-124 | NP_496062.3 |
Schizosaccharomyces pombe (fission yeast) | SPAC25B8.05 | NP_594465.1 |
Xenopus tropicalis (tropical clawed frog) | pus3 | NP_988969.1 |
Pan troglodytes (chimpanzee) | PUS3 | XP_001148378.1 |
PUS3 | XP_001111887.1 | |
Bos taurus (cattle) | PUS3 | NP_001029684.1 |
Gallus gallus (chicken) | PUS3 | XP_004948004.1 |
Danio rerio (zebrafish) | pus3 | NP_956361.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010807 | XP_318500.4 |
Mus musculus (house mouse) | Pus3 | NP_075781.3 |
Kluyveromyces lactis | KLLA0E14345g | XP_454596.1 |
Homo sapiens (human) | PUS3 | NP_112597.3 |
Rattus norvegicus (Norway rat) | Pus3 | NP_001101604.1 |
Drosophila melanogaster (fruit fly) | CG3045 | NP_611646.1 |
Saccharomyces cerevisiae (baker's yeast) | DEG1 | NP_116655.1 |
Eremothecium gossypii | AGOS_AGL003W | NP_986663.2 |
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae.
Murakami Y, Naitou M, Hagiwara H, Shibata T, Ozawa M, Sasanuma S, Sasanuma M, Tsuchiya Y, Soeda E, Yokoyama K
Nature genetics10(3)261-8(1995 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Results provide evidence for the role of Deg1 in pseudouridine formation at positions 38 and 39 (psi38/39) in two glutamine isoacceptor tRNAs.
Title: Role of Pseudouridine Formation by Deg1 for Functionality of Two Glutamine Isoacceptor tRNAs.
Pseudouridine synthase 3 (Pus3p), the DEG1 gene product, modifies the anticodon arm of transfer RNA at positions 38 and 39 by catalyzing the conversion of uridine to pseudouridine
Title: DEG1, encoding the tRNA:pseudouridine synthase Pus3p, impacts HOT1-stimulated recombination in Saccharomyces cerevisiae.
The following DEG1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DEG1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi00236 | |
Clone ID Related Accession (Same CDS sequence) | NM_001179965.1 | |
Accession Version | NM_001179965.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1329bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | pseudouridine synthase DEG1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001138). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGAGTAATT TCATTAGAAG GCTAGTTGGG AAAATGAAAG CGATTTCAAC AGGTACCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_116655.1 |
CDS | 1..1329 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001179965.1 |
1 | ATGAGTAATT TCATTAGAAG GCTAGTTGGG AAAATGAAAG CGATTTCAAC AGGTACCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Life with 6000 genes. |
Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae. |