Smarcd2 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Smarcd2
Entrez Gene ID	83833
Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Synonyms	BAF60b
General protein information	Preferred Names SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 Names SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 60 kDa BRG-1/Brm-associated factor subunit B BRG1-associated factor 60B
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 10 Map Location: 10q32.1
Summary	component of the SWI/SNF chromatin remodeling complex [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
NM_031983.2	NP_114189.1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2

Pathways from BioSystems

Homologies

Homo sapiens (human)	SMARCD2	NP_001091896.1
Pan troglodytes (chimpanzee)	SMARCD2	XP_001148723.1
Mus musculus (house mouse)	Smarcd2	NP_001123659.1
Bos taurus (cattle)	SMARCD2	NP_001192391.1
Rattus norvegicus (Norway rat)	Smarcd2	NP_114189.1
Danio rerio (zebrafish)	smarcd2	XP_692749.2
	LOC717461	XP_001108960.2
Canis lupus familiaris (dog)	SMARCD2	XP_850369.1
Gallus gallus (chicken)	SMARCD2	XP_004948577.1
Xenopus tropicalis (tropical clawed frog)	smarcd2	NP_001039267.1

Gene Ontology
Bibliography

Related articles in PubMed

The spectrum of SWI/SNF mutations, ubiquitous in human cancers.
Shain AH, Pollack JR
PloS one8(1)e55119(2013)

ATP-dependent chromatin remodeling: genetics, genomics and mechanisms.
Hargreaves DC, Crabtree GR
Cell research21(3)396-420(2011 Mar)

Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF form a chromatin remodeling complex at the beta-globin locus control region.
Mahajan MC, Narlikar GJ, Boyapaty G, Kingston RE, Weissman SM
Proceedings of the National Academy of Sciences of the United States of America102(42)15012-7(2005 Oct)

Fanconi anemia protein, FANCA, associates with BRG1, a component of the human SWI/SNF complex.
Otsuki T, Furukawa Y, Ikeda K, Endo H, Yamashita T, Shinohara A, Iwamatsu A, Ozawa K, Liu JM
Human molecular genetics10(23)2651-60(2001 Nov)

Gene structure of rat BAF60b, a component of mammalian SW1/SNF complexes, and its physical linkage to the growth hormone gene and transcription factor SUG/proteasome p45 gene.
Nomoto K, Nakazato S, Kazahari K, Ono M
Gene202(1-2)157-65(1997 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Smarcd2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Smarcd2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa08909	NM_031983.2 Latest version!	Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (Smarcd2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$314.30 $449.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Smarcd2 ( NM_031983.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_114189.1 Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (Smarcd2), mRNA.

Price & Availability↑

CloneID	ORa08909
Clone ID Related Accession (Same CDS sequence)	NM_031983.2
Accession Version	NM_031983.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1596bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-23
Organism	Rattus norvegicus(Norway rat)
Product	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC062063.1. On Dec 20, 2003 this sequence version replaced NM_031983.1. ##Evidence-Data-START## Transcript exon combination :: BC062063.1, AB003504.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGTCGGGCC GTGGCGCGGG CGGGTTCCCG CTGCCCCCGC TGAGCCCCGG CGGCGGCGCC 
GTTGCCGCGG CCCTCGGTGC GCCGCCTCCG CCTGCGGGAC CCGGAATGCT GCCCAACCCG 
GCGCTCAGGG GCCCGGGGCC TTCTGGAGGC ATGGGGGTAC CGGGGGCCGC TGCCTTCCGC 
CCCATGGGCC CCGCGGGCCC CGCGGCGCAG TACCAGCGAC CTGGCATGTC CCCAGGAAGT 
AGGATGCCCA TGGCTGGCTT GCAGGTGGGA CCTCCGGCTG GTTCCCCATT TGGCACAGCT 
GCTCCACTTC GACCTGGCAT GCCACCTACC ATGATGGATC CATTCCGAAA ACGCCTGCTT 
GTGCCTCAGG CCCAGCCCCC GATGCCTGCC CAGCGCCGAG GGTTAAAGAG GAGGAAGATG 
GCAGATAAGG TTCTACCTCA GCGAATCCGG GAGCTTGTCC CAGAGTCTCA GGCATACATG 
GATCTTTTAG CTTTCGAGAG GAAGCTGGAC CAGACCATCG CTCGCAAGCG GATGGAGATC 
CAAGAGGCCA TCAAGAAGCC TCTGACGCAA AAGCGAAAAC TTCGGATCTA TATTTCCAAT 
ACATTCAGTC CCAGCAAGGC AGATGGTGAT AATTCAGGAA CTGCAGGGAC CCCTGGGGGA 
ACCCCAGCAG CAGACAAGGT GGCCTCCTGG GAGCTTCGAG TAGAGGGAAA ACTTCTGGAT 
GATCCTAGCA AACAGAAGAG GAAGTTCTCC TCATTCTTTA AGAGCCTTGT TATCGAGTTG 
GACAAGGAGC TGTATGGGCC TGACAACCAT CTGGTGGAGT GGCATCGGAT GCCCACCACT 
CAGGAAACAG ATGGCTTTCA GGTGAAACGG CCAGGAGATC TCAATGTCAA GTGCACCCTT 
CTGCTCATGC TGGATCATCA GCCACCTCAG TATAAACTGG ACCCCCGCCT GGCGAGGTTG 
CTGGGAGTGC ACACACAGAC GAGAGCTGCC ATCATGCAGG CGCTGTGGCT TTACATCAAA 
CACAACCAGC TGCAGGATGG GCATGAGCGG GAGTACATCA ACTGCAACCG CTACTTCCGC 
CAGATCTTCA GCTGTGGCCG GCTCCGTTTC TCCGAGATCC CCATGAAGCT GGCTGGGCTG 
CTGCAGCATC CAGACCCCAT TGTTATTAAC CATGTCATTA GCGTGGACCC TAATGACCAG 
AAGAAGACAG CCTGTTATGA CATCGACGTA GAGGTTGATG ACCCCCTGAA GGCCCAGATG 
AGTAACTTCC TGGCCTCTAC CACCAACCAG CAGGAGATTG CCTCTCTTGA TGTCAAGATC 
CATGAGACCA TTGAGTCCAT CAACCAGCTG AAGACCCAGA GGGACTTCAT GCTCAGCTTC 
AGCACCGAGC CCCAGGACTT CATCCAGGAA TGGCTCCGCT CCCAACGCCG AGACCTCAAG 
ATCATCACAG ATGTGATTGG AAACCCTGAG GAGGAGAGAC GAGCTGCTTT CTACCACCAG 
CCCTGGGCTC AGGAAGCAGT TGGGAGGCAC ATCTTTGCCA AGGTGCAGCA GCGAAGGCAG 
GAACTGGAAC AGGTGCTGGG AATTCGCCTG ACCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_114189.1
CDS	86..1681
Translation	MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPNPALRGPGPSGGMGVPGAAAFRPMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNSGTAGTPGGTPAADKVASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT

Target ORF information:

RefSeq Version	NM_031983.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (Smarcd2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_031983.2

ORF Insert Sequence:

ATGTCGGGCC GTGGCGCGGG CGGGTTCCCG CTGCCCCCGC TGAGCCCCGG CGGCGGCGCC 
GTTGCCGCGG CCCTCGGTGC GCCGCCTCCG CCTGCGGGAC CCGGAATGCT GCCCAACCCG 
GCGCTCAGGG GCCCGGGGCC TTCTGGAGGC ATGGGGGTAC CGGGGGCCGC TGCCTTCCGC 
CCCATGGGCC CCGCGGGCCC CGCGGCGCAG TACCAGCGAC CTGGCATGTC CCCAGGAAGT 
AGGATGCCCA TGGCTGGCTT GCAGGTGGGA CCTCCGGCTG GTTCCCCATT TGGCACAGCT 
GCTCCACTTC GACCTGGCAT GCCACCTACC ATGATGGATC CATTCCGAAA ACGCCTGCTT 
GTGCCTCAGG CCCAGCCCCC GATGCCTGCC CAGCGCCGAG GGTTAAAGAG GAGGAAGATG 
GCAGATAAGG TTCTACCTCA GCGAATCCGG GAGCTTGTCC CAGAGTCTCA GGCATACATG 
GATCTTTTAG CTTTCGAGAG GAAGCTGGAC CAGACCATCG CTCGCAAGCG GATGGAGATC 
CAAGAGGCCA TCAAGAAGCC TCTGACGCAA AAGCGAAAAC TTCGGATCTA TATTTCCAAT 
ACATTCAGTC CCAGCAAGGC AGATGGTGAT AATTCAGGAA CTGCAGGGAC CCCTGGGGGA 
ACCCCAGCAG CAGACAAGGT GGCCTCCTGG GAGCTTCGAG TAGAGGGAAA ACTTCTGGAT 
GATCCTAGCA AACAGAAGAG GAAGTTCTCC TCATTCTTTA AGAGCCTTGT TATCGAGTTG 
GACAAGGAGC TGTATGGGCC TGACAACCAT CTGGTGGAGT GGCATCGGAT GCCCACCACT 
CAGGAAACAG ATGGCTTTCA GGTGAAACGG CCAGGAGATC TCAATGTCAA GTGCACCCTT 
CTGCTCATGC TGGATCATCA GCCACCTCAG TATAAACTGG ACCCCCGCCT GGCGAGGTTG 
CTGGGAGTGC ACACACAGAC GAGAGCTGCC ATCATGCAGG CGCTGTGGCT TTACATCAAA 
CACAACCAGC TGCAGGATGG GCATGAGCGG GAGTACATCA ACTGCAACCG CTACTTCCGC 
CAGATCTTCA GCTGTGGCCG GCTCCGTTTC TCCGAGATCC CCATGAAGCT GGCTGGGCTG 
CTGCAGCATC CAGACCCCAT TGTTATTAAC CATGTCATTA GCGTGGACCC TAATGACCAG 
AAGAAGACAG CCTGTTATGA CATCGACGTA GAGGTTGATG ACCCCCTGAA GGCCCAGATG 
AGTAACTTCC TGGCCTCTAC CACCAACCAG CAGGAGATTG CCTCTCTTGA TGTCAAGATC 
CATGAGACCA TTGAGTCCAT CAACCAGCTG AAGACCCAGA GGGACTTCAT GCTCAGCTTC 
AGCACCGAGC CCCAGGACTT CATCCAGGAA TGGCTCCGCT CCCAACGCCG AGACCTCAAG 
ATCATCACAG ATGTGATTGG AAACCCTGAG GAGGAGAGAC GAGCTGCTTT CTACCACCAG 
CCCTGGGCTC AGGAAGCAGT TGGGAGGCAC ATCTTTGCCA AGGTGCAGCA GCGAAGGCAG 
GAACTGGAAC AGGTGCTGGG AATTCGCCTG ACCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The spectrum of SWI/SNF mutations, ubiquitous in human cancers.
PloS one8(1)e55119(2013)
Shain AH,Pollack JR

ATP-dependent chromatin remodeling: genetics, genomics and mechanisms.
Cell research21(3)396-420(2011 Mar)
Hargreaves DC,Crabtree GR

Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF form a chromatin remodeling complex at the beta-globin locus control region.
Proceedings of the National Academy of Sciences of the United States of America102(42)15012-7(2005 Oct)
Mahajan MC,Narlikar GJ,Boyapaty G,Kingston RE,Weissman SM

Fanconi anemia protein, FANCA, associates with BRG1, a component of the human SWI/SNF complex.
Human molecular genetics10(23)2651-60(2001 Nov)
Otsuki T,Furukawa Y,Ikeda K,Endo H,Yamashita T,Shinohara A,Iwamatsu A,Ozawa K,Liu JM

Gene structure of rat BAF60b, a component of mammalian SW1/SNF complexes, and its physical linkage to the growth hormone gene and transcription factor SUG/proteasome p45 gene.
Gene202(1-2)157-65(1997 Nov)
Nomoto K,Nakazato S,Kazahari K,Ono M

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Smarcd2 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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