Aco1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Aco1
Entrez Gene ID	50655
Full Name	aconitase 1
Synonyms	AH,Acon1,IRP1
General protein information	Preferred Names aconitase 1 Names cytoplasmic aconitate hydratase IRE-BP 1 aconitase 1, soluble citrate hydro-lyase iron regulatory protein 1 iron-responsive element-binding protein 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 5 Map Location: 5\|5q22
Summary	This gene encodes a member of the aconitase/IPM isomerase protein family. The encoded protein has been identified as a moonlighting protein based on its ability to perform mechanistically distinct functions. Depending on iron levels in the cytosol, the encoded protein can function as either an aconitase enzyme or as an mRNA binding protein. When cellular iron levels are high, the encoded protein functions as an aconitase, an essential enzyme in the TCA cycle that catalyzes the conversion of citrate to isocitrate. When cellular iron levels are low, the encoded protein regulates iron uptake and utilization by binding to iron-responsive elements in the untranslated regions of mRNAs for genes involved in iron metabolism [provided by RefSeq, Jan 2014].

mRNA and Protein(s)

mRNA	Protein	Name
NM_017321.1	NP_059017.1	cytoplasmic aconitate hydratase

Pathways from BioSystems

Homologies

Homo sapiens (human)	ACO1	NP_002188.1
Pan troglodytes (chimpanzee)	ACO1	XP_001156102.1
Drosophila melanogaster (fruit fly)	Irp-1A	NP_477371.1
Arabidopsis thaliana (thale cress)	ACO1	NP_195308.1
	ACO1	XP_001103761.1
Bos taurus (cattle)	ACO1	NP_001069059.1
Arabidopsis thaliana (thale cress)	ACO3	NP_178634.2
Caenorhabditis elegans (roundworm)	aco-1	NP_509898.1
Oryza sativa (rice)	Os03g0136900	NP_001048898.1
Canis lupus familiaris (dog)	ACO1	XP_538698.2
Rattus norvegicus (Norway rat)	Aco1	NP_059017.1
Danio rerio (zebrafish)	aco1	NP_001030155.1
Drosophila melanogaster (fruit fly)	Irp-1B	NP_524303.2
Xenopus tropicalis (tropical clawed frog)	aco1	NP_001135643.1
Mus musculus (house mouse)	Aco1	NP_031412.2
Gallus gallus (chicken)	ACO1	NP_001025707.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP007258	XP_308544.4

Gene Ontology
Bibliography

Related articles in PubMed

Inhibitory effect of homocysteine on rat neural stem cell growth in vitro is associated with reduced protein levels and enzymatic activities of aconitase and respiratory complex III.
Zhang XM, Zhao YQ, Yan H, Liu H, Huang GW
Journal of bioenergetics and biomembranes49(2)131-138(2017 Apr)

Iron-dependent turnover of IRP-1/c-aconitase in kidney cells.
Liu Y, Templeton DM
Metallomics : integrated biometal science7(5)766-75(2015 May)

Cellular iron uptake, trafficking and metabolism: Key molecules and mechanisms and their roles in disease.
Lane DJ, Merlot AM, Huang ML, Bae DH, Jansson PJ, Sahni S, Kalinowski DS, Richardson DR
Biochimica et biophysica acta1853(5)1130-44(2015 May)

Cadmium-induced aggregation of iron regulatory protein-1.
Liu Y, Xiao W, Templeton DM
Toxicology324108-15(2014 Oct)

The role of iron in anthracycline cardiotoxicity.
Gammella E, Maccarinelli F, Buratti P, Recalcati S, Cairo G
Frontiers in pharmacology525(2014)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Proteomic analysis revealed that the expression levels of two mitochondrial proteins, cytochrome bc1 complex2 (UQCRC2, the major component of electron transport chain complex III) and aconitase (an enzyme involved in the tricarboxylic acid cycle), were decreased by homocysteine in neural stem cells
Title: Inhibitory effect of homocysteine on rat neural stem cell growth in vitro is associated with reduced protein levels and enzymatic activities of aconitase and respiratory complex III.

Iron increases turnover of IRP-1 in kidney cells, while increasing aconitase activity, suggesting that the apoprotein (aconitase-inactive) form is not exclusively responsible for turnover.
Title: Iron-dependent turnover of IRP-1/c-aconitase in kidney cells.

Polymer-dependent translocation of IRP-1 in Cd(2+)-exposed cells may underlie effects of Cd(2+) on iron homeostasis.
Title: Cadmium-induced aggregation of iron regulatory protein-1.

These results indicate that aconitase can exert control over respiration (with tissue specificity) and support the hypothesis that inactivation of aconitase may provide a control mechanism to prevent O2(-) and H2O2 formation by the respiratory chain.
Title: Metabolic control analysis of mitochondrial aconitase: influence over respiration and mitochondrial superoxide and hydrogen peroxide production.

Results suggest that IL-1beta and TNF-alpha released by microglia might contribute to iron accumulation in ventral mesencephalic neurons by upregulating IRP1 and hepcidin levels through reactive oxygen/nitrogen species production.
Title: Pro-inflammatory cytokines modulate iron regulatory protein 1 expression and iron transportation through reactive oxygen/nitrogen species production in ventral mesencephalic neurons.

The following Aco1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Aco1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa12848	NM_017321.1 Latest version!	Rattus norvegicus aconitase 1 (Aco1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Aco1 ( NM_017321.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_059017.1 Rattus norvegicus aconitase 1 (Aco1), mRNA.

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CloneID	ORa12848
Clone ID Related Accession (Same CDS sequence)	NM_017321.1
Accession Version	NM_017321.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2670bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-25
Organism	Rattus norvegicus(Norway rat)
Product	cytoplasmic aconitate hydratase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from L23874.1. On Dec 17, 2003 this sequence version replaced XM_346735.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: L23874.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## multifunctional gene product(s) :: inferred from conservation ##RefSeq-Attributes-END##

ATGAAGAATC CATTTGCGCA CCTTGCCGAG CCCTTGGACC CTGCACAGCC AGGAAAGAAA 
TTCTTCAACT TGAATAAATT GGAGGACTCA AGATATGGAC GCTTACCGTT CTCTATCAGA 
GTTCTCCTGG AGGCCGCCGT TCGGAACTGT GACGAGTTTT TGGTGAAGAA GAATGACATT 
GAGAATATCC TGAACTGGAG TATCATGCAG CATAAGAGCA TAGAAGTGCC GTTTAAGCCA 
GCCCGAGTCA TACTGCAGGA CTTTACGGGC GTGCCTGCTG TGGTTGATTT TGCAGCAATG 
CGCGATGCTG TGAAGAAGTT GGGAGGAAAT CCAGAGAAAA TAAACCCTGT CTGCCCCGCT 
GACCTTGTAA TCGATCATTC CATCCAGGTT CATTTCAACA GAAGGGCAGA CAGTTTGCAG 
AAGAATCAAG ACCTGGAATT TGAAAGGAAT AGAGAACGAT TTGAATTTTT AAAGTGGGGT 
TCCCAGGCCT TTTGCAACAT GAGGATTATT CCTCCTGGCT CAGGAATTAT TCACCAAGTG 
AATCTGGAGT ATTTGGCAAG AGTAGTGTTT GATCAGGATG GATGTTACTA CCCAGATAGC 
CTCGTGGGCA CAGATTCTCA CACCACCATG ATTGATGGTC TGGGAGTTCT TGGTTGGGGT 
GTAGGTGGTA TTGAAGCAGA AGCTGTCATG CTGGGTCAGC CAATCAGCAT GGTGCTTCCC 
CAGGTGATTG GCTACAAGCT GATGGGGAAG CCTCACCCTC TGGTAACCTC CACGGACATT 
GTGCTCACCA TTACCAAGCA CCTCCGACAA GTTGGGGTCG TGGGCAAATT CGTGGAGTTT 
TTCGGGCCAG GAGTGGCCCA GCTGTCCATT GCTGACCGAG CTACGATTGC CAACATGTGC 
CCAGAGTACG GCGCGACGGC AGCCTTCTTC CCGGTCGACG ACGTTAGCAT CGCGTACCTG 
GTGCAGACAG GTCGTGAGGA AGACAAAGTA AAGCACATTA AAAGGTATCT TCAGGCTGTA 
GGCATGTTTC GAGACTTCAG TGACTCCTCT CAAGACCCAG ACTTCACTCA GGTCGTGGAG 
TTAGATTTGA AAACAGTTGT GCCTTGCTGC AGTGGACCTA AAAGACCTCA GGACAAAGTT 
GCTGTGTCTG AGATTGAAAA GGACTTTGAA AGCTGCCTTG GAGCCAAGCA AGGATTTAAA 
GGTTTTCAAG TTGCTCCAGA CCATCACAAT GACCACAAGA CGTTTATCTA TAACGACAGT 
GAATTCACTC TTGCTCATGG CTCCGTGGTG ATCGCCGCCA TCACTAGCTG CACAAACACC 
AGCAATCCGT CCGTGATGTT AGGCGCAGGA TTGTTAGCAA AGAAAGCCGT AGAGGCTGGC 
CTGAATGTGA AGCCTTACGT CAAAACCAGC CTGTCTCCTG GGAGTGGAGT GGTCACCTAC 
TACCTTCGAG AGAGTGGAGT CATGCCTTAC CTGTCCCAGT TAGGGTTTGA CGTGGTGGGC 
TACGGCTGCA TGACCTGCAT CGGCAACAGT GGACCCCTCC CCGAACCTGT GGTGGAGGCT 
ATCACCCAGG GAGACCTTGT GGCTGTTGGG GTACTGTCTG GAAACAGGAA TTTTGAAGGA 
CGAGTCCATC CTAACACCCG GGCCAACTAC TTAGCATCTC CCCCACTAGT AATAGCATAT 
GCAATTGCAG GCACCGTCAG GATCGACTTC GAGAAAGAGC CTTTGGGAGT GAACGCACAG 
GGCCAACAAG TGTTTCTGAA GGATATCTGG CCAACTCGAG ATGAGATCCA GGAGGTGGAG 
CGGAAGTATG TCATCCCCGG CATGTTCAAG GAGGTCTATC AGAAGATAGA GACTGTAAAC 
AAAAGCTGGA ATGCCTTAGC AGCCCCTTCA GAGAAGCTGT ATGCGTGGAA CCCCAAGTCT 
ACTTATATCA AGTCACCGCC ATTCTTTGAA AGCTTGACTT TAGATCTCCA GCCCCCCAAG 
TCTATAGTGG ATGCCTATGT GCTACTAAAT CTAGGAGATT CCGTAACAAC GGACCATATC 
TCTCCAGCGG GGAACATTGC AAGAAACAGC CCTGCCGCTC GCTACTTGAC GAACAGAGGC 
CTGACGCCAC GAGATTTCAA CTCCTACGGC TCCCGCCGGG GTAACGACGC CATCATGGCA 
CGGGGGACAT TTGCCAACAT TCGCTTGCTG AACAAGTTTC TGAACAAGCA GGCCCCTCAG 
ACTGTCCACC TTCCTTCAGG AGAAACCCTC GATGTGTTCG ATGCCGCTGA GCGGTACCAG 
CAGGCTGGAC TTCCCCTGAT TGTTCTGGCT GGCAAAGAGT ACGGTTCAGG CAGCTCCCGA 
GACTGGGCAG CCAAAGGTCC TTTCCTGCTG GGAATCAAAG CTGTCCTGGC AGAGAGCTAC 
GAGCGCACTC ACTGCAGCAA CCTGGTTGGC ATGGGGGTGA TCCCCCTTGA GTATCTCCCC 
GGCGAAACTG CAGACTCTCT GGGACTCACG GGTCGGGAAA GGTACACGAT CCACATTCCC 
GAACACCTTA AGCCCCGCAT GAAGGTTCAG ATAAAGCTGG ACACCGGGAA GACCTTCCAG 
GCCGTGATGA GGTTCGACAC CGACGTGGAG CTCACTTACT TCCACAATGG AGGCATCCTG 
AACTACATGA TCCGAAAGAT GGCCCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_059017.1
CDS	237..2906
Translation	MKNPFAHLAEPLDPAQPGKKFFNLNKLEDSRYGRLPFSIRVLLEAAVRNCDEFLVKKNDIENILNWSIMQHKSIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGNPEKINPVCPADLVIDHSIQVHFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFCNMRIIPPGSGIIHQVNLEYLARVVFDQDGCYYPDSLVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMVLPQVIGYKLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDDVSIAYLVQTGREEDKVKHIKRYLQAVGMFRDFSDSSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSEIEKDFESCLGAKQGFKGFQVAPDHHNDHKTFIYNDSEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVEAGLNVKPYVKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTVRIDFEKEPLGVNAQGQQVFLKDIWPTRDEIQEVERKYVIPGMFKEVYQKIETVNKSWNALAAPSEKLYAWNPKSTYIKSPPFFESLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPRDFNSYGSRRGNDAIMARGTFANIRLLNKFLNKQAPQTVHLPSGETLDVFDAAERYQQAGLPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERTHCSNLVGMGVIPLEYLPGETADSLGLTGRERYTIHIPEHLKPRMKVQIKLDTGKTFQAVMRFDTDVELTYFHNGGILNYMIRKMAQ

Target ORF information:

RefSeq Version	NM_017321.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus aconitase 1 (Aco1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_017321.1

ORF Insert Sequence:

ATGAAGAATC CATTTGCGCA CCTTGCCGAG CCCTTGGACC CTGCACAGCC AGGAAAGAAA 
TTCTTCAACT TGAATAAATT GGAGGACTCA AGATATGGAC GCTTACCGTT CTCTATCAGA 
GTTCTCCTGG AGGCCGCCGT TCGGAACTGT GACGAGTTTT TGGTGAAGAA GAATGACATT 
GAGAATATCC TGAACTGGAG TATCATGCAG CATAAGAGCA TAGAAGTGCC GTTTAAGCCA 
GCCCGAGTCA TACTGCAGGA CTTTACGGGC GTGCCTGCTG TGGTTGATTT TGCAGCAATG 
CGCGATGCTG TGAAGAAGTT GGGAGGAAAT CCAGAGAAAA TAAACCCTGT CTGCCCCGCT 
GACCTTGTAA TCGATCATTC CATCCAGGTT CATTTCAACA GAAGGGCAGA CAGTTTGCAG 
AAGAATCAAG ACCTGGAATT TGAAAGGAAT AGAGAACGAT TTGAATTTTT AAAGTGGGGT 
TCCCAGGCCT TTTGCAACAT GAGGATTATT CCTCCTGGCT CAGGAATTAT TCACCAAGTG 
AATCTGGAGT ATTTGGCAAG AGTAGTGTTT GATCAGGATG GATGTTACTA CCCAGATAGC 
CTCGTGGGCA CAGATTCTCA CACCACCATG ATTGATGGTC TGGGAGTTCT TGGTTGGGGT 
GTAGGTGGTA TTGAAGCAGA AGCTGTCATG CTGGGTCAGC CAATCAGCAT GGTGCTTCCC 
CAGGTGATTG GCTACAAGCT GATGGGGAAG CCTCACCCTC TGGTAACCTC CACGGACATT 
GTGCTCACCA TTACCAAGCA CCTCCGACAA GTTGGGGTCG TGGGCAAATT CGTGGAGTTT 
TTCGGGCCAG GAGTGGCCCA GCTGTCCATT GCTGACCGAG CTACGATTGC CAACATGTGC 
CCAGAGTACG GCGCGACGGC AGCCTTCTTC CCGGTCGACG ACGTTAGCAT CGCGTACCTG 
GTGCAGACAG GTCGTGAGGA AGACAAAGTA AAGCACATTA AAAGGTATCT TCAGGCTGTA 
GGCATGTTTC GAGACTTCAG TGACTCCTCT CAAGACCCAG ACTTCACTCA GGTCGTGGAG 
TTAGATTTGA AAACAGTTGT GCCTTGCTGC AGTGGACCTA AAAGACCTCA GGACAAAGTT 
GCTGTGTCTG AGATTGAAAA GGACTTTGAA AGCTGCCTTG GAGCCAAGCA AGGATTTAAA 
GGTTTTCAAG TTGCTCCAGA CCATCACAAT GACCACAAGA CGTTTATCTA TAACGACAGT 
GAATTCACTC TTGCTCATGG CTCCGTGGTG ATCGCCGCCA TCACTAGCTG CACAAACACC 
AGCAATCCGT CCGTGATGTT AGGCGCAGGA TTGTTAGCAA AGAAAGCCGT AGAGGCTGGC 
CTGAATGTGA AGCCTTACGT CAAAACCAGC CTGTCTCCTG GGAGTGGAGT GGTCACCTAC 
TACCTTCGAG AGAGTGGAGT CATGCCTTAC CTGTCCCAGT TAGGGTTTGA CGTGGTGGGC 
TACGGCTGCA TGACCTGCAT CGGCAACAGT GGACCCCTCC CCGAACCTGT GGTGGAGGCT 
ATCACCCAGG GAGACCTTGT GGCTGTTGGG GTACTGTCTG GAAACAGGAA TTTTGAAGGA 
CGAGTCCATC CTAACACCCG GGCCAACTAC TTAGCATCTC CCCCACTAGT AATAGCATAT 
GCAATTGCAG GCACCGTCAG GATCGACTTC GAGAAAGAGC CTTTGGGAGT GAACGCACAG 
GGCCAACAAG TGTTTCTGAA GGATATCTGG CCAACTCGAG ATGAGATCCA GGAGGTGGAG 
CGGAAGTATG TCATCCCCGG CATGTTCAAG GAGGTCTATC AGAAGATAGA GACTGTAAAC 
AAAAGCTGGA ATGCCTTAGC AGCCCCTTCA GAGAAGCTGT ATGCGTGGAA CCCCAAGTCT 
ACTTATATCA AGTCACCGCC ATTCTTTGAA AGCTTGACTT TAGATCTCCA GCCCCCCAAG 
TCTATAGTGG ATGCCTATGT GCTACTAAAT CTAGGAGATT CCGTAACAAC GGACCATATC 
TCTCCAGCGG GGAACATTGC AAGAAACAGC CCTGCCGCTC GCTACTTGAC GAACAGAGGC 
CTGACGCCAC GAGATTTCAA CTCCTACGGC TCCCGCCGGG GTAACGACGC CATCATGGCA 
CGGGGGACAT TTGCCAACAT TCGCTTGCTG AACAAGTTTC TGAACAAGCA GGCCCCTCAG 
ACTGTCCACC TTCCTTCAGG AGAAACCCTC GATGTGTTCG ATGCCGCTGA GCGGTACCAG 
CAGGCTGGAC TTCCCCTGAT TGTTCTGGCT GGCAAAGAGT ACGGTTCAGG CAGCTCCCGA 
GACTGGGCAG CCAAAGGTCC TTTCCTGCTG GGAATCAAAG CTGTCCTGGC AGAGAGCTAC 
GAGCGCACTC ACTGCAGCAA CCTGGTTGGC ATGGGGGTGA TCCCCCTTGA GTATCTCCCC 
GGCGAAACTG CAGACTCTCT GGGACTCACG GGTCGGGAAA GGTACACGAT CCACATTCCC 
GAACACCTTA AGCCCCGCAT GAAGGTTCAG ATAAAGCTGG ACACCGGGAA GACCTTCCAG 
GCCGTGATGA GGTTCGACAC CGACGTGGAG CTCACTTACT TCCACAATGG AGGCATCCTG 
AACTACATGA TCCGAAAGAT GGCCCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Inhibitory effect of homocysteine on rat neural stem cell growth in vitro is associated with reduced protein levels and enzymatic activities of aconitase and respiratory complex III.
Journal of bioenergetics and biomembranes49(2)131-138(2017 Apr)
Zhang XM,Zhao YQ,Yan H,Liu H,Huang GW

Iron-dependent turnover of IRP-1/c-aconitase in kidney cells.
Metallomics : integrated biometal science7(5)766-75(2015 May)
Liu Y,Templeton DM

Cellular iron uptake, trafficking and metabolism: Key molecules and mechanisms and their roles in disease.
Biochimica et biophysica acta1853(5)1130-44(2015 May)
Lane DJ,Merlot AM,Huang ML,Bae DH,Jansson PJ,Sahni S,Kalinowski DS,Richardson DR

Cadmium-induced aggregation of iron regulatory protein-1.
Toxicology324108-15(2014 Oct)
Liu Y,Xiao W,Templeton DM

The role of iron in anthracycline cardiotoxicity.
Frontiers in pharmacology525(2014)
Gammella E,Maccarinelli F,Buratti P,Recalcati S,Cairo G

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Aco1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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