Syde1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Syde1
Entrez Gene ID	362842
Full Name	synapse defective Rho GTPase homolog 1
Synonyms	RGD1305857
General protein information	Preferred Names synapse defective Rho GTPase homolog 1 Names rho GTPase-activating protein SYDE1 synapse defective 1, Rho GTPase, homolog 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 7 Map Location: 7q11

mRNA and Protein(s)

mRNA	Protein	Name
NM_001191876.1	NP_001178805.1	rho GTPase-activating protein SYDE1

Pathways from BioSystems

Homologies

Homo sapiens (human)	SYDE1	NP_149014.3
Pan troglodytes (chimpanzee)	SYDE1	XP_003316210.1
Gallus gallus (chicken)	SYDE1	XP_427446.4
Canis lupus familiaris (dog)	SYDE1	XP_003639825.1
Bos taurus (cattle)	SYDE1	XP_002688649.2
Mus musculus (house mouse)	Syde1	NP_082151.1
Rattus norvegicus (Norway rat)	Syde1	NP_001178805.1
Danio rerio (zebrafish)	LOC568166	XP_696571.6

Gene Ontology
Bibliography

Related articles in PubMed

Association of dysfunctional synapse defective 1 (SYDE1) with restricted fetal growth - SYDE1 regulates placental cell migration and invasion.
Lo HF, Tsai CY, Chen CP, Wang LJ, Lee YS, Chen CY, Liang CT, Cheong ML, Chen H
The Journal of pathology241(3)324-336(2017 Feb)

mSYD1A, a mammalian synapse-defective-1 protein, regulates synaptogenic signaling and vesicle docking.
Wentzel C, Sommer JE, Nair R, Stiefvater A, Sibarita JB, Scheiffele P
Neuron78(6)1012-23(2013 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Syde1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Syde1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa07901	NM_001191876.1 Latest version!	Rattus norvegicus synapse defective Rho GTPase homolog 1 (Syde1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Syde1 ( NM_001191876.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001178805.1 Rattus norvegicus synapse defective Rho GTPase homolog 1 (Syde1), mRNA.

Price & Availability↑

CloneID	ORa07901
Clone ID Related Accession (Same CDS sequence)	NM_001191876.1
Accession Version	NM_001191876.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2208bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-10-02
Organism	Rattus norvegicus(Norway rat)
Product	rho GTPase-activating protein SYDE1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07055860.1. On Jul 17, 2010 this sequence version replaced XM_343173.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGGCCGAGC CGCTGCTCAG GAAGACCTTC TCCCGCTTGC GGGGTCGGGA GAAACTTCCC 
CGGAAAAAGT CAGATGCCAA GGACCGCGGC CGCCCAGCCC AGCGCTCAGA GCCCAAACCC 
CCAGAACCAG AACCTCGCGT CCTTGAAGGG TCTCAGGCTG GAGCAGAGGT ACCACTCAGC 
CCCGAGACAC CTCGGAGCCC CGCTCGCGGT GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTAGGAGG GGCTAAACCA CCGGAGGAGA TATCTTTAGG GCCTAGGACA 
CCTAGCAGTG GGGAGCCTGC TGGTGAGATT TGGTACAACC CCATCCCTGA AGAAGACCCC 
AGACCTCCAG CACCTGAGCC CGTGGGATCG CAGCTAGCTT CCTCTGAGCC AGAAGGCCCG 
ATCCTCCAAG GTGCAGCCCC TACCAGCCCC CCTACCAAAA CCTCCCGTAC CAAGTCCCCA 
GGCCCTGCAA GGCGCCTCTC TATGAAGATG AAAAAGCTTC CAGAGCTGCG CCGCCGCCTG 
AGCCTAAGAA GTACTCGCAC TAGCAGGGAA CGAGAGAGGA CCGCCCCAGC AGGCTCTGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGTGTG GCGACTCCTG GGCAGGCATC AGTGGCTGGA 
GGGACTAGGA GCCCAAGGGG TGGGTACCTC AGCGATGGTG ATTCGCCGGA GCGTCCTGGG 
GGACCACCAT CACCCACTGC CTTCCGGCCC TATGAAGTGG GCCCATCAGC CCGGGCTCCT 
CCAGCCGCGC TCTGGGGGCG TCTCAGCCTG CACCTGTATG GGCTAGGGGG TCTGCGGCCA 
ACTCCGGGGG CTACTCCTCG TGATCTCTGC TGTCTTCTCC AAGTGGATGG AGTAGCTCGG 
GCCCGCACAG GGCCACTTCG AAGCGGGCCA GACTTCCTGA GGCTGGATCA CACCTTCCAC 
TTGGAGCTGG AGGCCGCTCG GCTGCTGCGG GCCTTGGTAC TTGCGTGGGA CCCTGGTGTG 
AGGCGGCACC GGCCCTGTGC CCAGGGCACT GTGCTACTGC CAACCATCTT TCGAGGGTGC 
CAAGCGCAAC AACTGGCCGT TCGACTGGAA CCCCAGGGAC TTCTGTATGC CAAGCTAACG 
TTGTCGGAAC AGCAAGAAGC CCCTGCCACA GTGGAGCCCC GTGTTTTCGG GCTCCCGCTG 
CAGCTTCTGG TAGAACGTGA GCAGTCTCCA GGCCAGGTGC CTCTCATCAT CCGAAAGTGT 
GTGGGGCAGA TCGAGTGCCG AGGGCTGCGG GTCGTGGGGC TGTACCGTCT CTGTGGCTCA 
GCCGCGGTGA AGAAAGAGCT TCGAGATGCC TTTGAGCAGG ACAGTGCAGC TGTGTGCCTC 
TCTGAAGATG TGTACCCCGA TATCAATGTC ATCACAGGCA TCCTCAAGGA TTACCTTCGA 
GAGCTGCCAA CGCCGCTCAT CACCCAGCCC CTCTACCAGG TGGTGCTGGA GGCCATGGCC 
CAAGGACACC CAAGCAGGGC TTCCCTGGGT CCTGAAGGCA CCAGAGGACT CCTCAGCTGC 
CTGCCAGATG TGGAGAGGGC CACACTGACG CTTCTTCTGG ACCATCTGCG CCTTGTCTCC 
TCCTTCCACA CCCACAACCG CATGACCCCG CAGAACTTGG CGGTGTGCTT CGGACCGGTG 
CTGCTGCCAG CGAGACAAAC ACCCTCTCGG ACCCGGCTCC GTGGCTCCGG CCCAGGAGTC 
AGCAGCGCTG TGGATTTCAA GCGCCACATT GAAGTCCTGC ATTACTTGTT ACAGTCTTGG 
CCAGATACCC GCCGGCCCTC AGAGACCCCA GACGTCGCAC CGTATTTGCG GCCCAAACGA 
CAGCCACCGC TGCACTTGCC GCTGGATGGC CCAGAAGTGG TGACTCGGCC TCGGGGCCGT 
GGAGGCCCCG AAAGTCCCCC AAGCAACCGC TATGCAGGCG ACTGGAGCGT GTGCGGGGGA 
GATTTACTGC CGCGTGGGCG GGACTTCCTG TCCGGACCTG ACTATGACCA CGTGACAGGC 
AGCGACAGTG AGGAAGATGA GGATGAGAGT GGAGAGCCGA GGGGCACTAC GGACTTCGAA 
GATGAGTTTG ATGCACCCTT CAACCCACAC CTGAATCTCA AAGACTTTGA TGCCCTCATC 
CTGGATCTGG AGAGAGAACT TTCCAAGCAG ATCAATGTGT GCCTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001178805.1
CDS	1..2208
Translation	MAEPLLRKTFSRLRGREKLPRKKSDAKDRGRPAQRSEPKPPEPEPRVLEGSQAGAEVPLSPETPRSPARGAYLQSLEPSSRRWVLGGAKPPEEISLGPRTPSSGEPAGEIWYNPIPEEDPRPPAPEPVGSQLASSEPEGPILQGAAPTSPPTKTSRTKSPGPARRLSMKMKKLPELRRRLSLRSTRTSRERERTAPAGSVISRYHLDSSVATPGQASVAGGTRSPRGGYLSDGDSPERPGGPPSPTAFRPYEVGPSARAPPAALWGRLSLHLYGLGGLRPTPGATPRDLCCLLQVDGVARARTGPLRSGPDFLRLDHTFHLELEAARLLRALVLAWDPGVRRHRPCAQGTVLLPTIFRGCQAQQLAVRLEPQGLLYAKLTLSEQQEAPATVEPRVFGLPLQLLVEREQSPGQVPLIIRKCVGQIECRGLRVVGLYRLCGSAAVKKELRDAFEQDSAAVCLSEDVYPDINVITGILKDYLRELPTPLITQPLYQVVLEAMAQGHPSRASLGPEGTRGLLSCLPDVERATLTLLLDHLRLVSSFHTHNRMTPQNLAVCFGPVLLPARQTPSRTRLRGSGPGVSSAVDFKRHIEVLHYLLQSWPDTRRPSETPDVAPYLRPKRQPPLHLPLDGPEVVTRPRGRGGPESPPSNRYAGDWSVCGGDLLPRGRDFLSGPDYDHVTGSDSEEDEDESGEPRGTTDFEDEFDAPFNPHLNLKDFDALILDLERELSKQINVCL

Target ORF information:

RefSeq Version	NM_001191876.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus synapse defective Rho GTPase homolog 1 (Syde1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001191876.1

ORF Insert Sequence:

ATGGCCGAGC CGCTGCTCAG GAAGACCTTC TCCCGCTTGC GGGGTCGGGA GAAACTTCCC 
CGGAAAAAGT CAGATGCCAA GGACCGCGGC CGCCCAGCCC AGCGCTCAGA GCCCAAACCC 
CCAGAACCAG AACCTCGCGT CCTTGAAGGG TCTCAGGCTG GAGCAGAGGT ACCACTCAGC 
CCCGAGACAC CTCGGAGCCC CGCTCGCGGT GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTAGGAGG GGCTAAACCA CCGGAGGAGA TATCTTTAGG GCCTAGGACA 
CCTAGCAGTG GGGAGCCTGC TGGTGAGATT TGGTACAACC CCATCCCTGA AGAAGACCCC 
AGACCTCCAG CACCTGAGCC CGTGGGATCG CAGCTAGCTT CCTCTGAGCC AGAAGGCCCG 
ATCCTCCAAG GTGCAGCCCC TACCAGCCCC CCTACCAAAA CCTCCCGTAC CAAGTCCCCA 
GGCCCTGCAA GGCGCCTCTC TATGAAGATG AAAAAGCTTC CAGAGCTGCG CCGCCGCCTG 
AGCCTAAGAA GTACTCGCAC TAGCAGGGAA CGAGAGAGGA CCGCCCCAGC AGGCTCTGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGTGTG GCGACTCCTG GGCAGGCATC AGTGGCTGGA 
GGGACTAGGA GCCCAAGGGG TGGGTACCTC AGCGATGGTG ATTCGCCGGA GCGTCCTGGG 
GGACCACCAT CACCCACTGC CTTCCGGCCC TATGAAGTGG GCCCATCAGC CCGGGCTCCT 
CCAGCCGCGC TCTGGGGGCG TCTCAGCCTG CACCTGTATG GGCTAGGGGG TCTGCGGCCA 
ACTCCGGGGG CTACTCCTCG TGATCTCTGC TGTCTTCTCC AAGTGGATGG AGTAGCTCGG 
GCCCGCACAG GGCCACTTCG AAGCGGGCCA GACTTCCTGA GGCTGGATCA CACCTTCCAC 
TTGGAGCTGG AGGCCGCTCG GCTGCTGCGG GCCTTGGTAC TTGCGTGGGA CCCTGGTGTG 
AGGCGGCACC GGCCCTGTGC CCAGGGCACT GTGCTACTGC CAACCATCTT TCGAGGGTGC 
CAAGCGCAAC AACTGGCCGT TCGACTGGAA CCCCAGGGAC TTCTGTATGC CAAGCTAACG 
TTGTCGGAAC AGCAAGAAGC CCCTGCCACA GTGGAGCCCC GTGTTTTCGG GCTCCCGCTG 
CAGCTTCTGG TAGAACGTGA GCAGTCTCCA GGCCAGGTGC CTCTCATCAT CCGAAAGTGT 
GTGGGGCAGA TCGAGTGCCG AGGGCTGCGG GTCGTGGGGC TGTACCGTCT CTGTGGCTCA 
GCCGCGGTGA AGAAAGAGCT TCGAGATGCC TTTGAGCAGG ACAGTGCAGC TGTGTGCCTC 
TCTGAAGATG TGTACCCCGA TATCAATGTC ATCACAGGCA TCCTCAAGGA TTACCTTCGA 
GAGCTGCCAA CGCCGCTCAT CACCCAGCCC CTCTACCAGG TGGTGCTGGA GGCCATGGCC 
CAAGGACACC CAAGCAGGGC TTCCCTGGGT CCTGAAGGCA CCAGAGGACT CCTCAGCTGC 
CTGCCAGATG TGGAGAGGGC CACACTGACG CTTCTTCTGG ACCATCTGCG CCTTGTCTCC 
TCCTTCCACA CCCACAACCG CATGACCCCG CAGAACTTGG CGGTGTGCTT CGGACCGGTG 
CTGCTGCCAG CGAGACAAAC ACCCTCTCGG ACCCGGCTCC GTGGCTCCGG CCCAGGAGTC 
AGCAGCGCTG TGGATTTCAA GCGCCACATT GAAGTCCTGC ATTACTTGTT ACAGTCTTGG 
CCAGATACCC GCCGGCCCTC AGAGACCCCA GACGTCGCAC CGTATTTGCG GCCCAAACGA 
CAGCCACCGC TGCACTTGCC GCTGGATGGC CCAGAAGTGG TGACTCGGCC TCGGGGCCGT 
GGAGGCCCCG AAAGTCCCCC AAGCAACCGC TATGCAGGCG ACTGGAGCGT GTGCGGGGGA 
GATTTACTGC CGCGTGGGCG GGACTTCCTG TCCGGACCTG ACTATGACCA CGTGACAGGC 
AGCGACAGTG AGGAAGATGA GGATGAGAGT GGAGAGCCGA GGGGCACTAC GGACTTCGAA 
GATGAGTTTG ATGCACCCTT CAACCCACAC CTGAATCTCA AAGACTTTGA TGCCCTCATC 
CTGGATCTGG AGAGAGAACT TTCCAAGCAG ATCAATGTGT GCCTCTGA