gRNAs
The following Vps39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Vps39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ORa02627 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001012186.2 | |
| Accession Version | NM_001012186.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2628bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | vam6/Vps39-like protein | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07053512.1 and AABR07053511.1. On Sep 11, 2008 this sequence version replaced NM_001012186.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGCATGACG CTTTTGAGCC GGTGCCGATC CTGGAGAAGC TTCCACTGCA GATTGACTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001012186.2 |
| CDS | 149..2776 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001012186.2 |
1 | ATGCATGACG CTTTTGAGCC GGTGCCGATC CTGGAGAAGC TTCCACTGCA GATTGACTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa26237 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006234782.3 | |
| Accession Version | XM_006234782.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2661bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | vam6/Vps39-like protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006234782.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCATGACG CTTTTGAGCC GGTGCCGATC CTGGAGAAGC TTCCACTGCA GATTGACTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006234844.1 |
| CDS | 166..2826 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006234782.3 |
1 | ATGCATGACG CTTTTGAGCC GGTGCCGATC CTGGAGAAGC TTCCACTGCA GATTGACTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa60481 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017591909.1 | |
| Accession Version | XM_017591909.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2256bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | vam6/Vps39-like protein isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGTGTGG CGGTGAGGAA GAAGCTGCAG TTGTACTTCT GGAAGGATAG AGAATTCCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017447398.1 |
| CDS | 342..2597 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017591909.1 |
1 | ATGTGTGTGG CGGTGAGGAA GAAGCTGCAG TTGTACTTCT GGAAGGATAG AGAATTCCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Recruitment of VPS33A to HOPS by VPS16 Is Required for Lysosome Fusion with Endosomes and Autophagosomes. |
Mammalian CORVET is required for fusion and conversion of distinct early endosome subpopulations. |
The HOPS complex mediates autophagosome-lysosome fusion through interaction with syntaxin 17. |
Structural basis of Vps33A recruitment to the human HOPS complex by Vps16. |
The HOPS proteins hVps41 and hVps39 are required for homotypic and heterotypic late endosome fusion. |
