Actl6a cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Actl6a
Entrez Gene ID	361925
Full Name	actin-like 6A
Synonyms	RGD1307747
General protein information	Preferred Names actin-like 6A Names actin-like protein 6A
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 2 Map Location: 2q24

mRNA and Protein(s)

mRNA	Protein	Name
XM_006232253.2	XP_006232315.1	actin-like protein 6A isoform X1
NM_001039033.1	NP_001034122.1	actin-like protein 6A

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Actl6a	NP_001034122.1
Canis lupus familiaris (dog)	ACTL6A	XP_848224.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008687	XP_314784.2
Arabidopsis thaliana (thale cress)	ARP4	NP_564051.1
Oryza sativa (rice)	Os08g0137200	NP_001060954.1
Bos taurus (cattle)	ACTL6A	NP_001098505.1
Danio rerio (zebrafish)	actl6a	NP_775347.1
Homo sapiens (human)	ACTL6A	NP_004292.1
Mus musculus (house mouse)	Actl6a	NP_062647.2
Gallus gallus (chicken)	ACTL6A	XP_422784.3
Pan troglodytes (chimpanzee)	ACTL6A	XP_003310168.1
	ACTL6A	NP_001098029.1
Drosophila melanogaster (fruit fly)	Bap55	NP_611209.1
Caenorhabditis elegans (roundworm)	swsn-6	NP_500801.2
Xenopus tropicalis (tropical clawed frog)	actl6a	NP_989337.1

Gene Ontology
Bibliography

Related articles in PubMed

Towards Functional Annotation of the Preimplantation Transcriptome: An RNAi Screen in Mammalian Embryos.
Cui W, Dai X, Marcho C, Han Z, Zhang K, Tremblay KD, Mager J
Scientific reports637396(2016 Nov)

Genome-wide RNAi screen identifies the Parkinson disease GWAS risk locus SREBF1 as a regulator of mitophagy.
Ivatt RM, Sanchez-Martinez A, Godena VK, Brown S, Ziviani E, Whitworth AJ
Proceedings of the National Academy of Sciences of the United States of America111(23)8494-9(2014 Jun)

miR-9*- and miR-124a-Mediated switching of chromatin remodelling complexes is altered in rat spina bifida aperta.
Wei X, Li H, Miao J, Liu B, Zhan Y, Wu D, Zhang Y, Wang L, Fan Y, Gu H, Wang W, Yuan Z
Neurochemical research38(8)1605-15(2013 Aug)

Kinetic analysis of npBAF to nBAF switching reveals exchange of SS18 with CREST and integration with neural developmental pathways.
Staahl BT, Tang J, Wu W, Sun A, Gitler AD, Yoo AS, Crabtree GR
The Journal of neuroscience : the official journal of the Society for Neuroscience33(25)10348-61(2013 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Actl6a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Actl6a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa08258	NM_001039033.1 Latest version!	Rattus norvegicus actin-like 6A (Actl6a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$188.30 $269.00
ORa24612	XM_006232253.2 Latest version!	Rattus norvegicus actin-like 6A (Actl6a), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Actl6a ( NM_001039033.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001034122.1 Rattus norvegicus actin-like 6A (Actl6a), mRNA.

Price & Availability↑

CloneID	ORa08258
Clone ID Related Accession (Same CDS sequence)	NM_001039033.1
Accession Version	NM_001039033.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1290bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-18
Organism	Rattus norvegicus(Norway rat)
Product	actin-like protein 6A
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC098698.1. On Jan 12, 2006 this sequence version replaced XM_342225.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC098698.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGAGCGGCG GCGTGTACGG CGGAGATGAA GTTGGCGCTC TTGTTTTTGA CATTGGATCA 
TATACAGTGA GGGCTGGCTA TGCTGGTGAG GACTGCCCTA AGGTTGATTT CCCCACGGCT 
ATCGGGGTGG TGCTGGAGAG AGATGATGGA AGCACGATGA TGGAGATCGA TGGTGACAAA 
GGCAAGCAGG GCGGGCCCAC CTACTACATA GACACCAATG CCCTCCGAGT GCCCAGGGAG 
AGCATGGAAG CCATCTCACC GCTCAAGAAT GGCATGGTTG AAGACTGGGA TAGTTTCCAG 
GCCATTTTGG ATCATACATA CAAGATGCAT GTCAAATCTG AAGCCAGTCT GCATCCTGTT 
CTCATGTCGG AAGCACCGTG GAACACCAGG GCAAAGAGAG AGAAACTGAC AGAGTTGATG 
TTTGAGCACT ACAGCATCCC TGCATTCTTC CTTTGCAAAA CTGCAGTTTT GACGGCATTT 
GCTAATGGTC GTTCTACTGG GCTGATATTG GACAGTGGAG CTACCCACAC CACTGCGATT 
CCAGTCCATG ATGGCTACGT CCTTCAACAA GGCATTGTGA AATCCCCTCT TGCTGGAGAC 
TTCATTACCA TGCAGTGCAG AGAACTCTTC CAGGAAATGA ACATAGAACT CATCCCTCCT 
TATATGATTG CATCAAAAGA GGCTGTTCGA GAAGGCTCTC CAGCCAACTG GAAAAGGAAA 
GAGAAACTGC CCCAGGTTAC AAGGTCTTGG CATAATTACA TGTGCAACTG CGTCATCCAA 
GATTTTCAAG CTTCCGTCCT TCAAGTGTCA GACTCCACCT ATGACGAACA AGTGGCTGCA 
CAGATGCCCA CTGTTCACTA TGAATTCCCT AATGGCTACA ACTGCGATTT TGGTGCAGAG 
CGGCTGAAAA TTCCTGAAGG ATTATTTGAC CCTTCCAACG TAAAGGGACT ATCTGGGAAC 
ACAATGCTGG GAGTCAGTCA CGTTGTCACA ACAAGTGTTG GAATGTGTGA CATTGACATC 
AGACCAGGTC TCTATGGCAG TGTGATCGTA GCAGGAGGAA ACACCTTAAT ACAGAGTTTC 
ACGGATAGGT TAAATAGAGA GCTTTCTCAG AAAACTCCGC CGAGTATGCG GTTGAAACTG 
ATTGCAAACA ACACGACGGT GGAGCGGAGG TTCAGCTCGT GGATCGGCGG CTCCATCCTA 
GCATCTTTGG GTACCTTTCA ACAGATGTGG ATTTCCAAAC AGGAATATGA AGAAGGAGGG 
AAGCAGTGTG TAGAAAGAAA ATGCCCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001034122.1
CDS	75..1364
Translation	MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRESMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP

Target ORF information:

RefSeq Version	NM_001039033.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus actin-like 6A (Actl6a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001039033.1

ORF Insert Sequence:

ATGAGCGGCG GCGTGTACGG CGGAGATGAA GTTGGCGCTC TTGTTTTTGA CATTGGATCA 
TATACAGTGA GGGCTGGCTA TGCTGGTGAG GACTGCCCTA AGGTTGATTT CCCCACGGCT 
ATCGGGGTGG TGCTGGAGAG AGATGATGGA AGCACGATGA TGGAGATCGA TGGTGACAAA 
GGCAAGCAGG GCGGGCCCAC CTACTACATA GACACCAATG CCCTCCGAGT GCCCAGGGAG 
AGCATGGAAG CCATCTCACC GCTCAAGAAT GGCATGGTTG AAGACTGGGA TAGTTTCCAG 
GCCATTTTGG ATCATACATA CAAGATGCAT GTCAAATCTG AAGCCAGTCT GCATCCTGTT 
CTCATGTCGG AAGCACCGTG GAACACCAGG GCAAAGAGAG AGAAACTGAC AGAGTTGATG 
TTTGAGCACT ACAGCATCCC TGCATTCTTC CTTTGCAAAA CTGCAGTTTT GACGGCATTT 
GCTAATGGTC GTTCTACTGG GCTGATATTG GACAGTGGAG CTACCCACAC CACTGCGATT 
CCAGTCCATG ATGGCTACGT CCTTCAACAA GGCATTGTGA AATCCCCTCT TGCTGGAGAC 
TTCATTACCA TGCAGTGCAG AGAACTCTTC CAGGAAATGA ACATAGAACT CATCCCTCCT 
TATATGATTG CATCAAAAGA GGCTGTTCGA GAAGGCTCTC CAGCCAACTG GAAAAGGAAA 
GAGAAACTGC CCCAGGTTAC AAGGTCTTGG CATAATTACA TGTGCAACTG CGTCATCCAA 
GATTTTCAAG CTTCCGTCCT TCAAGTGTCA GACTCCACCT ATGACGAACA AGTGGCTGCA 
CAGATGCCCA CTGTTCACTA TGAATTCCCT AATGGCTACA ACTGCGATTT TGGTGCAGAG 
CGGCTGAAAA TTCCTGAAGG ATTATTTGAC CCTTCCAACG TAAAGGGACT ATCTGGGAAC 
ACAATGCTGG GAGTCAGTCA CGTTGTCACA ACAAGTGTTG GAATGTGTGA CATTGACATC 
AGACCAGGTC TCTATGGCAG TGTGATCGTA GCAGGAGGAA ACACCTTAAT ACAGAGTTTC 
ACGGATAGGT TAAATAGAGA GCTTTCTCAG AAAACTCCGC CGAGTATGCG GTTGAAACTG 
ATTGCAAACA ACACGACGGT GGAGCGGAGG TTCAGCTCGT GGATCGGCGG CTCCATCCTA 
GCATCTTTGG GTACCTTTCA ACAGATGTGG ATTTCCAAAC AGGAATATGA AGAAGGAGGG 
AAGCAGTGTG TAGAAAGAAA ATGCCCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Actl6a ( XM_006232253.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006232315.1 Rattus norvegicus actin-like 6A (Actl6a), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa24612
Clone ID Related Accession (Same CDS sequence)	XM_006232253.2
Accession Version	XM_006232253.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1134bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	actin-like protein 6A isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006232253.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGGAGA TCGATGGTGA CAAAGGCAAG CAGGGCGGGC CCACCTACTA CATAGACACC 
AATGCCCTCC GAGTGCCCAG GGAGAGCATG GAAGCCATCT CACCGCTCAA GAATGGCATG 
GTTGAAGACT GGGATAGTTT CCAGGCCATT TTGGATCATA CATACAAGAT GCATGTCAAA 
TCTGAAGCCA GTCTGCATCC TGTTCTCATG TCGGAAGCAC CGTGGAACAC CAGGGCAAAG 
AGAGAGAAAC TGACAGAGTT GATGTTTGAG CACTACAGCA TCCCTGCATT CTTCCTTTGC 
AAAACTGCAG TTTTGACGGC ATTTGCTAAT GGTCGTTCTA CTGGGCTGAT ATTGGACAGT 
GGAGCTACCC ACACCACTGC GATTCCAGTC CATGATGGCT ACGTCCTTCA ACAAGGCATT 
GTGAAATCCC CTCTTGCTGG AGACTTCATT ACCATGCAGT GCAGAGAACT CTTCCAGGAA 
ATGAACATAG AACTCATCCC TCCTTATATG ATTGCATCAA AAGAGGCTGT TCGAGAAGGC 
TCTCCAGCCA ACTGGAAAAG GAAAGAGAAA CTGCCCCAGG TTACAAGGTC TTGGCATAAT 
TACATGTGCA ACTGCGTCAT CCAAGATTTT CAAGCTTCCG TCCTTCAAGT GTCAGACTCC 
ACCTATGACG AACAAGTGGC TGCACAGATG CCCACTGTTC ACTATGAATT CCCTAATGGC 
TACAACTGCG ATTTTGGTGC AGAGCGGCTG AAAATTCCTG AAGGATTATT TGACCCTTCC 
AACGTAAAGG GACTATCTGG GAACACAATG CTGGGAGTCA GTCACGTTGT CACAACAAGT 
GTTGGAATGT GTGACATTGA CATCAGACCA GGTCTCTATG GCAGTGTGAT CGTAGCAGGA 
GGAAACACCT TAATACAGAG TTTCACGGAT AGGTTAAATA GAGAGCTTTC TCAGAAAACT 
CCGCCGAGTA TGCGGTTGAA ACTGATTGCA AACAACACGA CGGTGGAGCG GAGGTTCAGC 
TCGTGGATCG GCGGCTCCAT CCTAGCATCT TTGGGTACCT TTCAACAGAT GTGGATTTCC 
AAACAGGAAT ATGAAGAAGG AGGGAAGCAG TGTGTAGAAA GAAAATGCCC TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006232315.1
CDS	259..1392
Translation	MMEIDGDKGKQGGPTYYIDTNALRVPRESMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP

Target ORF information:

RefSeq Version	XM_006232253.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus actin-like 6A (Actl6a), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006232253.2

ORF Insert Sequence:

ATGATGGAGA TCGATGGTGA CAAAGGCAAG CAGGGCGGGC CCACCTACTA CATAGACACC 
AATGCCCTCC GAGTGCCCAG GGAGAGCATG GAAGCCATCT CACCGCTCAA GAATGGCATG 
GTTGAAGACT GGGATAGTTT CCAGGCCATT TTGGATCATA CATACAAGAT GCATGTCAAA 
TCTGAAGCCA GTCTGCATCC TGTTCTCATG TCGGAAGCAC CGTGGAACAC CAGGGCAAAG 
AGAGAGAAAC TGACAGAGTT GATGTTTGAG CACTACAGCA TCCCTGCATT CTTCCTTTGC 
AAAACTGCAG TTTTGACGGC ATTTGCTAAT GGTCGTTCTA CTGGGCTGAT ATTGGACAGT 
GGAGCTACCC ACACCACTGC GATTCCAGTC CATGATGGCT ACGTCCTTCA ACAAGGCATT 
GTGAAATCCC CTCTTGCTGG AGACTTCATT ACCATGCAGT GCAGAGAACT CTTCCAGGAA 
ATGAACATAG AACTCATCCC TCCTTATATG ATTGCATCAA AAGAGGCTGT TCGAGAAGGC 
TCTCCAGCCA ACTGGAAAAG GAAAGAGAAA CTGCCCCAGG TTACAAGGTC TTGGCATAAT 
TACATGTGCA ACTGCGTCAT CCAAGATTTT CAAGCTTCCG TCCTTCAAGT GTCAGACTCC 
ACCTATGACG AACAAGTGGC TGCACAGATG CCCACTGTTC ACTATGAATT CCCTAATGGC 
TACAACTGCG ATTTTGGTGC AGAGCGGCTG AAAATTCCTG AAGGATTATT TGACCCTTCC 
AACGTAAAGG GACTATCTGG GAACACAATG CTGGGAGTCA GTCACGTTGT CACAACAAGT 
GTTGGAATGT GTGACATTGA CATCAGACCA GGTCTCTATG GCAGTGTGAT CGTAGCAGGA 
GGAAACACCT TAATACAGAG TTTCACGGAT AGGTTAAATA GAGAGCTTTC TCAGAAAACT 
CCGCCGAGTA TGCGGTTGAA ACTGATTGCA AACAACACGA CGGTGGAGCG GAGGTTCAGC 
TCGTGGATCG GCGGCTCCAT CCTAGCATCT TTGGGTACCT TTCAACAGAT GTGGATTTCC 
AAACAGGAAT ATGAAGAAGG AGGGAAGCAG TGTGTAGAAA GAAAATGCCC TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Towards Functional Annotation of the Preimplantation Transcriptome: An RNAi Screen in Mammalian Embryos.
Scientific reports637396(2016 Nov)
Cui W,Dai X,Marcho C,Han Z,Zhang K,Tremblay KD,Mager J

Genome-wide RNAi screen identifies the Parkinson disease GWAS risk locus SREBF1 as a regulator of mitophagy.
Proceedings of the National Academy of Sciences of the United States of America111(23)8494-9(2014 Jun)
Ivatt RM,Sanchez-Martinez A,Godena VK,Brown S,Ziviani E,Whitworth AJ

miR-9*- and miR-124a-Mediated switching of chromatin remodelling complexes is altered in rat spina bifida aperta.
Neurochemical research38(8)1605-15(2013 Aug)
Wei X,Li H,Miao J,Liu B,Zhan Y,Wu D,Zhang Y,Wang L,Fan Y,Gu H,Wang W,Yuan Z

Kinetic analysis of npBAF to nBAF switching reveals exchange of SS18 with CREST and integration with neural developmental pathways.
The Journal of neuroscience : the official journal of the Society for Neuroscience33(25)10348-61(2013 Jun)
Staahl BT,Tang J,Wu W,Sun A,Gitler AD,Yoo AS,Crabtree GR

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Actl6a cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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