gRNAs
The following Plxnb1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Plxnb1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | NM_001108188.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-08-21 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 precursor | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07073448.1 and CA504175.1. On or before Aug 22, 2019 this sequence version replaced XM_006243882.2, XM_006226570.2, NM_001108188.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. This transcript is based on transcript alignments from orthologous data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001101658.2 |
| CDS | 129..6494 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001108188.2 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006243884.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006243884.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006243946.1 |
| CDS | 245..6610 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006243884.3 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006226570.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000076.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006226570.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006226632.1 |
| CDS | 250..6615 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006226570.2 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006226573.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000076.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006226573.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006226635.1 |
| CDS | 348..6713 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006226573.3 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006243883.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006243883.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006243945.1 |
| CDS | 291..6656 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006243883.3 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006243885.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006243885.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006243947.1 |
| CDS | 348..6713 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006243885.3 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006226571.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000076.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006226571.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006226633.1 |
| CDS | 291..6656 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006226571.3 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006226572.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000076.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006226572.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006226634.1 |
| CDS | 245..6610 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006226572.3 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa18129 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006243884.3 , XM_006226570.2 , XM_006226573.3 , XM_006243883.3 , XM_006243885.3 , NM_001108188.2 , XM_006226571.3 , XM_006226572.3 , XM_006243882.2 | |
| Accession Version | XM_006243882.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6366bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | plexin-B1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006243882.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006243944.1 |
| CDS | 250..6615 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006243882.2 |
1 | ATGTCTGTCC TCGGCCCAGT TCTTCTCCAG GTGTTCTGGG CTGGCTGTGT CCTCACCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Semaphorin4D-PlexinB1 Signaling Attenuates Photoreceptor Outer Segment Phagocytosis by Reducing Rac1 Activity of RPE Cells. |
Role of inhibition of osteogenesis function by Sema4D/Plexin-B1 signaling pathway in skeletal fluorosis in vitro. |
The class 4 semaphorin Sema4D promotes the rapid assembly of GABAergic synapses in rodent hippocampus. |
Suppression of bone formation by osteoclastic expression of semaphorin 4D. |
