Dnajc6 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Dnajc6
Entrez Gene ID	313409
Full Name	DnaJ heat shock protein family (Hsp40) member C6
General protein information	Preferred Names DnaJ heat shock protein family (Hsp40) member C6 Names putative tyrosine-protein phosphatase auxilin DnaJ (Hsp40) homolog, subfamily C, member 6
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 5 Map Location: 5q33

mRNA and Protein(s)

mRNA	Protein	Name
XM_006238446.3	XP_006238508.1	putative tyrosine-protein phosphatase auxilin isoform X1
XM_006238448.3	XP_006238510.1	putative tyrosine-protein phosphatase auxilin isoform X3
NM_001107949.4	NP_001101419.1	putative tyrosine-protein phosphatase auxilin
XM_006238447.3	XP_006238509.2	putative tyrosine-protein phosphatase auxilin isoform X2
XM_006238449.3	XP_006238511.1	putative tyrosine-protein phosphatase auxilin isoform X4

Pathways from BioSystems

Homologies

	DNAJC6	XP_001090057.1
Danio rerio (zebrafish)	dnajc6	XP_005165940.1
Homo sapiens (human)	DNAJC6	NP_001243793.1
Pan troglodytes (chimpanzee)	DNAJC6	XP_001161657.1
Mus musculus (house mouse)	Dnajc6	NP_001158055.1
Xenopus tropicalis (tropical clawed frog)	dnajc6	NP_001120147.1
Canis lupus familiaris (dog)	DNAJC6	XP_546673.2
Rattus norvegicus (Norway rat)	Dnajc6	NP_001101419.1
Bos taurus (cattle)	DNAJC6	NP_777261.1
Gallus gallus (chicken)	DNAJC6	NP_001170886.1

Gene Ontology
Bibliography

Related articles in PubMed

Impaired intracellular trafficking defines early Parkinson's disease.
Hunn BH, Cragg SJ, Bolam JP, Spillantini MG, Wade-Martins R
Trends in neurosciences38(3)178-88(2015 Mar)

Synaptojanin 1 mutation in Parkinson's disease brings further insight into the neuropathological mechanisms.
Drouet V, Lesage S
BioMed research international2014289728(2014)

Synaptic vesicle endocytosis.
Saheki Y, De Camilli P
Cold Spring Harbor perspectives in biology4(9)a005645(2012 Sep)

MiR-3120 is a mirror microRNA that targets heat shock cognate protein 70 and auxilin messenger RNAs and regulates clathrin vesicle uncoating.
Scott H, Howarth J, Lee YB, Wong LF, Bantounas I, Phylactou L, Verkade P, Uney JB
The Journal of biological chemistry287(18)14726-33(2012 Apr)

A sequential mechanism for clathrin cage disassembly by 70-kDa heat-shock cognate protein (Hsc70) and auxilin.
Rothnie A, Clarke AR, Kuzmic P, Cameron A, Smith CJ
Proceedings of the National Academy of Sciences of the United States of America108(17)6927-32(2011 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

miR-3120 was found to be located in neuronal cell bodies and to target Hsc70 and auxilin, and its lentivirus-mediated expression inhibited the uncoating of clathrin-coated vesicles.
Title: MiR-3120 is a mirror microRNA that targets heat shock cognate protein 70 and auxilin messenger RNAs and regulates clathrin vesicle uncoating.

A sequential mechanism for clathrin cage disassembly by 70-kDa heat-shock cognate protein (Hsc70) and auxilin.
Title: A sequential mechanism for clathrin cage disassembly by 70-kDa heat-shock cognate protein (Hsc70) and auxilin.

The following Dnajc6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Dnajc6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa11563	NM_001107949.4 Latest version!	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$475.30 $679.00
ORa28351	XM_006238446.3 Latest version!	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$475.30 $679.00
ORa28353	XM_006238448.3 Latest version!	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$475.30 $679.00
ORa28354	XM_006238449.3 Latest version!	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$475.30 $679.00
ORa61218	XM_006238447.3 Latest version!	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Dnajc6 ( NM_001107949.4 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001101419.1 Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), mRNA.

Price & Availability↑

CloneID	ORa11563
Clone ID Related Accession (Same CDS sequence)	NM_001107949.4
Accession Version	NM_001107949.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2736bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-11-18
Organism	Rattus norvegicus(Norway rat)
Product	putative tyrosine-protein phosphatase auxilin
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07049389.1 and AC129815.5. On Oct 10, 2014 this sequence version replaced NM_001107949.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGACAAATC CAAAGTCAGG GGTTGCAGAG TCAGCCGGAC TTGCCTGCTC TCGTGCAGCA 
GCGGGAGGAA ACAGAATGAA AGATTCTGAA AATAAAGGTG CCTCATCTCC AGACATGGAG 
CCCAGCTATG GGGGAGGCCT TTTTGATATG GTGAAAGGTG GTGCAGGTAG GCTATTCAGT 
AACCTGAAGG ACAACTTGAA AGACACCCTC AAAGATACAT CCTCCAGAGT CATCCAGTCT 
GTTAGCAGCT ACACAAAGGG AGACCTAGAC TTTACTTATG TCACTTCCAG GATTATCGTG 
ATGTCCTTTC CTATGGACAG TGTTGACATA GGATTCAGGA ATCAGGTTGA TGACATCCGT 
AGCTTTTTGG ATTCCAGACA TCTTGACCAC TACACAGTAT ACAACTTGTC ACCCAAGTCT 
TACCGAACTG CCAAGTTCCA CAGCCGGGTC TCAGAGTGCA GTTGGCCCAT CAGGCAGGCC 
CCAAGTCTAC ACAACCTGTT TGCTGTGTGT CGGAATATGT ATAACTGGCT GCTGCAGAAT 
CCCAAAAATG TCTGTGTTGT CCACTGCTTG GATGGACGGG CCGCATCATC AATTCTGGTT 
GGTGCTATGT TCATTTTCTG TAATCTCTAC TCTACGCCTG GCCCTGCTGT TCGATTACTC 
TACGCAAAGC GACCAGGAAT TGGACTGTCT CCGTCCCACA GGAGGTACTT AGGCTACATG 
TGTGACCTAC TTGCAGATAA GCCCTACCGT CCTCACTTCA AGCCGCTCAC AATCAAGGCA 
ATCACTGTCA GCCCAATTCC CTTCTTCAAT AAACAGAGGA ATGGGTGCCG CCCTTACTGT 
GACGTACTGA TTGGAGAAAC TAAAATATTC TCAACATGCA CAGACTTCGA ACGAATGAAA 
GAATACCGTG TCCAAGATGG GAAAATCTTC ATCCCTCTGA ACATCACAGT CCAAGGTGAC 
GTCATTGTTT CCATGTACCA CTTGCGGTCA ACCATCGGGA GCCGGCTGCA GGCTAAGGTG 
ACCAACACAC AGATATTCCA GCTCCAGTTT CATTCTGGAT TTATACCACT GGACACAACA 
GTTTTAAAGT TCACCAAGCC TGAGTTGGAT GCATGTGATG TACCAGAAAA ATATCCTCAG 
CTGTTCCAAG TGACACTGGA TATAGAAGTA CAGCCCCAAG ACAAAGTGAT CGACCTAACT 
CCACCATGGG AGCACTACTG CACAAAGGAT GTGAACCCCA GCATCCTCTT CTCCTCTCAG 
CAGGAGCATC AGGATACTCT GGCCTTAGGG GATCAGAAAT CAGAGAAGTC ACGGTGTGAG 
GAGGACCACG CAGCCCTGGT GAATCAGGAA AGCGAGCAGT CGGATGATGA ACTACTGACT 
CTCTCAAGCC CACATGGCAA TGCTGATGGT GACAAGCCTC ATGGAGCCAA GAAGCCTGGC 
AAAAAGCAGC AGGAGCCAGC TGCGCCTCCT CCCCCAGAGG AGGTGGACCT TCTGGGCCTG 
GAAGGGTCCG ATGTGAGCAC GAACTTCTCC CCCTTGGCAG CTCCTCCCAG CAATTCTGAA 
CTGCTGAGTG ACCTGTTTGG GGGTGGAGGT GCCACAGGTC CTGCCCAGGC AGGACAGGTT 
GGAGTCGAAG ATGTGTTTCA CCCAAGTGGA CCTGCGTCTG CGCAGTCCAC ACCACGCCGA 
GCCACCACTT CCGCCTCTGC ATCGCCAACC CTAAGAGTGG GAGAAGGTGC CACCTTTGAC 
CCTTTTGGAG CCCCTGCTAA GCCACCAGGT CAGGATTTGT TGGGCTCCTT CCTGAACACA 
TCCAATGCTT CTAGCGACCC CTTTCTGCAG CCCACGAGAA GCCCTTCCCC TACAGTGCAT 
GCTTCTAGCA CTCCTGCTGT GAACATCCAA CCAGACATTG CTGGAGGTTG GGACTGGCAT 
GCCAAACCAG GAGGTTTTGG GATGGGAAGC AAATCGGCTG CCACCAGCCC AACAGGCTCA 
ACACACGGCA CCCCTACCCA TCAGAGCAAG CCCCAGACTC TGGATCCCTT CGCTGACTTG 
GGGACACTAG GCAGCTCTTC ATTTGCCAGC AAACCCACCA CACCAACTGG ATTGGGTGGA 
GGATTTCCAC CTCTCAGCTC ACCACAGAAA GCGTCCCCAC AGCCCATGGG TGGAGGGTGG 
CAGCAGCCAG CCGGCTACAA CTGGCAGCAG GCACAGCCTA AGCCACAGTC TAGTATGCCT 
CACTCCTCCC CTCAGAACCG ACCCAATTAC AACGTGAGCT TCTCAGCTAT GCCTGCAGGG 
CAGAGCGACC GTGGAAAAGG ATCTACTAAC TTAGAAGGAA AACAGAAGGC TGCTGACTTT 
GAAGATCTGC TTTCCAGTCA AGGCTTCAAT GCCCACAAAG ACAAAAAGGG GCCTCGAACA 
ATAGCTGAGA TGAGAAAGGA GGAAATGGCT AAGGAAATGG ATCCTGAGAA ACTGAAGATC 
CTGGAGTGGA TAGAAGGCAA AGAGAGAAAC ATCAGAGCCC TGCTTTCCAC AATGCACACT 
GTGCTGTGGG CTGGGGAGAC CAAGTGGAAA CCTGTGGGCA TGGCAGACCT GGTGACGCCA 
GAGCAAGTGA AGAAGGTGTA CAGGAGAGCC GTGCTAGTGG TGCACCCCGA CAAGGCTACT 
GGGCAACCCT ATGAACAATA TGCAAAGATG ATCTTCATGG AGCTAAATGA TGCCTGGTCC 
GAATTTGAAA ACCAAGGCCA AAAGCCCTTG TATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001101419.1
CDS	111..2846
Translation	MTNPKSGVAESAGLACSRAAAGGNRMKDSENKGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLDFTYVTSRIIVMSFPMDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFNKQRNGCRPYCDVLIGETKIFSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRSTIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEVQPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGDQKSEKSRCEEDHAALVNQESEQSDDELLTLSSPHGNADGDKPHGAKKPGKKQQEPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQVGVEDVFHPSGPASAQSTPRRATTSASASPTLRVGEGATFDPFGAPAKPPGQDLLGSFLNTSNASSDPFLQPTRSPSPTVHASSTPAVNIQPDIAGGWDWHAKPGGFGMGSKSAATSPTGSTHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQPAGYNWQQAQPKPQSSMPHSSPQNRPNYNVSFSAMPAGQSDRGKGSTNLEGKQKAADFEDLLSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY

Target ORF information:

RefSeq Version	NM_001107949.4
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001107949.4

ORF Insert Sequence:

ATGACAAATC CAAAGTCAGG GGTTGCAGAG TCAGCCGGAC TTGCCTGCTC TCGTGCAGCA 
GCGGGAGGAA ACAGAATGAA AGATTCTGAA AATAAAGGTG CCTCATCTCC AGACATGGAG 
CCCAGCTATG GGGGAGGCCT TTTTGATATG GTGAAAGGTG GTGCAGGTAG GCTATTCAGT 
AACCTGAAGG ACAACTTGAA AGACACCCTC AAAGATACAT CCTCCAGAGT CATCCAGTCT 
GTTAGCAGCT ACACAAAGGG AGACCTAGAC TTTACTTATG TCACTTCCAG GATTATCGTG 
ATGTCCTTTC CTATGGACAG TGTTGACATA GGATTCAGGA ATCAGGTTGA TGACATCCGT 
AGCTTTTTGG ATTCCAGACA TCTTGACCAC TACACAGTAT ACAACTTGTC ACCCAAGTCT 
TACCGAACTG CCAAGTTCCA CAGCCGGGTC TCAGAGTGCA GTTGGCCCAT CAGGCAGGCC 
CCAAGTCTAC ACAACCTGTT TGCTGTGTGT CGGAATATGT ATAACTGGCT GCTGCAGAAT 
CCCAAAAATG TCTGTGTTGT CCACTGCTTG GATGGACGGG CCGCATCATC AATTCTGGTT 
GGTGCTATGT TCATTTTCTG TAATCTCTAC TCTACGCCTG GCCCTGCTGT TCGATTACTC 
TACGCAAAGC GACCAGGAAT TGGACTGTCT CCGTCCCACA GGAGGTACTT AGGCTACATG 
TGTGACCTAC TTGCAGATAA GCCCTACCGT CCTCACTTCA AGCCGCTCAC AATCAAGGCA 
ATCACTGTCA GCCCAATTCC CTTCTTCAAT AAACAGAGGA ATGGGTGCCG CCCTTACTGT 
GACGTACTGA TTGGAGAAAC TAAAATATTC TCAACATGCA CAGACTTCGA ACGAATGAAA 
GAATACCGTG TCCAAGATGG GAAAATCTTC ATCCCTCTGA ACATCACAGT CCAAGGTGAC 
GTCATTGTTT CCATGTACCA CTTGCGGTCA ACCATCGGGA GCCGGCTGCA GGCTAAGGTG 
ACCAACACAC AGATATTCCA GCTCCAGTTT CATTCTGGAT TTATACCACT GGACACAACA 
GTTTTAAAGT TCACCAAGCC TGAGTTGGAT GCATGTGATG TACCAGAAAA ATATCCTCAG 
CTGTTCCAAG TGACACTGGA TATAGAAGTA CAGCCCCAAG ACAAAGTGAT CGACCTAACT 
CCACCATGGG AGCACTACTG CACAAAGGAT GTGAACCCCA GCATCCTCTT CTCCTCTCAG 
CAGGAGCATC AGGATACTCT GGCCTTAGGG GATCAGAAAT CAGAGAAGTC ACGGTGTGAG 
GAGGACCACG CAGCCCTGGT GAATCAGGAA AGCGAGCAGT CGGATGATGA ACTACTGACT 
CTCTCAAGCC CACATGGCAA TGCTGATGGT GACAAGCCTC ATGGAGCCAA GAAGCCTGGC 
AAAAAGCAGC AGGAGCCAGC TGCGCCTCCT CCCCCAGAGG AGGTGGACCT TCTGGGCCTG 
GAAGGGTCCG ATGTGAGCAC GAACTTCTCC CCCTTGGCAG CTCCTCCCAG CAATTCTGAA 
CTGCTGAGTG ACCTGTTTGG GGGTGGAGGT GCCACAGGTC CTGCCCAGGC AGGACAGGTT 
GGAGTCGAAG ATGTGTTTCA CCCAAGTGGA CCTGCGTCTG CGCAGTCCAC ACCACGCCGA 
GCCACCACTT CCGCCTCTGC ATCGCCAACC CTAAGAGTGG GAGAAGGTGC CACCTTTGAC 
CCTTTTGGAG CCCCTGCTAA GCCACCAGGT CAGGATTTGT TGGGCTCCTT CCTGAACACA 
TCCAATGCTT CTAGCGACCC CTTTCTGCAG CCCACGAGAA GCCCTTCCCC TACAGTGCAT 
GCTTCTAGCA CTCCTGCTGT GAACATCCAA CCAGACATTG CTGGAGGTTG GGACTGGCAT 
GCCAAACCAG GAGGTTTTGG GATGGGAAGC AAATCGGCTG CCACCAGCCC AACAGGCTCA 
ACACACGGCA CCCCTACCCA TCAGAGCAAG CCCCAGACTC TGGATCCCTT CGCTGACTTG 
GGGACACTAG GCAGCTCTTC ATTTGCCAGC AAACCCACCA CACCAACTGG ATTGGGTGGA 
GGATTTCCAC CTCTCAGCTC ACCACAGAAA GCGTCCCCAC AGCCCATGGG TGGAGGGTGG 
CAGCAGCCAG CCGGCTACAA CTGGCAGCAG GCACAGCCTA AGCCACAGTC TAGTATGCCT 
CACTCCTCCC CTCAGAACCG ACCCAATTAC AACGTGAGCT TCTCAGCTAT GCCTGCAGGG 
CAGAGCGACC GTGGAAAAGG ATCTACTAAC TTAGAAGGAA AACAGAAGGC TGCTGACTTT 
GAAGATCTGC TTTCCAGTCA AGGCTTCAAT GCCCACAAAG ACAAAAAGGG GCCTCGAACA 
ATAGCTGAGA TGAGAAAGGA GGAAATGGCT AAGGAAATGG ATCCTGAGAA ACTGAAGATC 
CTGGAGTGGA TAGAAGGCAA AGAGAGAAAC ATCAGAGCCC TGCTTTCCAC AATGCACACT 
GTGCTGTGGG CTGGGGAGAC CAAGTGGAAA CCTGTGGGCA TGGCAGACCT GGTGACGCCA 
GAGCAAGTGA AGAAGGTGTA CAGGAGAGCC GTGCTAGTGG TGCACCCCGA CAAGGCTACT 
GGGCAACCCT ATGAACAATA TGCAAAGATG ATCTTCATGG AGCTAAATGA TGCCTGGTCC 
GAATTTGAAA ACCAAGGCCA AAAGCCCTTG TATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Dnajc6 ( XM_006238446.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006238508.1 Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa28351
Clone ID Related Accession (Same CDS sequence)	XM_006238446.3
Accession Version	XM_006238446.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2907bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	putative tyrosine-protein phosphatase auxilin isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006238446.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGCCTCC TCGGGAGCTA CCGGAAAAAG ACCAGCAGCG ATGGTTATGA ATCTTTGCAG 
CTGGTGGACA GTCACGGGGA CTCGAGCGCA CGGGGCGCGG CGGCTGGCAC GCAGAGGGTG 
ACCACGGGCG CGGTGCGTAG TCCCGCCCGG CAGCCTCCGC ACCGCGCCAG CACCACGGAC 
AGCTCAGGTG CCTCATCTCC AGACATGGAG CCCAGCTATG GGGGAGGCCT TTTTGATATG 
GTGAAAGGTG GTGCAGGTAG GCTATTCAGT AACCTGAAGG ACAACTTGAA AGACACCCTC 
AAAGATACAT CCTCCAGAGT CATCCAGTCT GTTAGCAGCT ACACAAAGGG AGACCTAGAC 
TTTACTTATG TCACTTCCAG GATTATCGTG ATGTCCTTTC CTATGGACAG TGTTGACATA 
GGATTCAGGA ATCAGGTTGA TGACATCCGT AGCTTTTTGG ATTCCAGACA TCTTGACCAC 
TACACAGTAT ACAACTTGTC ACCCAAGTCT TACCGAACTG CCAAGTTCCA CAGCCGGGTC 
TCAGAGTGCA GTTGGCCCAT CAGGCAGGCC CCAAGTCTAC ACAACCTGTT TGCTGTGTGT 
CGGAATATGT ATAACTGGCT GCTGCAGAAT CCCAAAAATG TCTGTGTTGT CCACTGCTTG 
GATGGACGGG CCGCATCATC AATTCTGGTT GGTGCTATGT TCATTTTCTG TAATCTCTAC 
TCTACGCCTG GCCCTGCTGT TCGATTACTC TACGCAAAGC GACCAGGAAT TGGACTGTCT 
CCGTCCCACA GGAGGTACTT AGGCTACATG TGTGACCTAC TTGCAGATAA GCCCTACCGT 
CCTCACTTCA AGCCGCTCAC AATCAAGGCA ATCACTGTCA GCCCAATTCC CTTCTTCAAT 
AAACAGAGGA ATGGGTGCCG CCCTTACTGT GACGTACTGA TTGGAGAAAC TAAAATATTC 
TCAACATGCA CAGACTTCGA ACGAATGAAA GAATACCGTG TCCAAGATGG GAAAATCTTC 
ATCCCTCTGA ACATCACAGT CCAAGGTGAC GTCATTGTTT CCATGTACCA CTTGCGGTCA 
ACCATCGGGA GCCGGCTGCA GGCTAAGGTG ACCAACACAC AGATATTCCA GCTCCAGTTT 
CATTCTGGAT TTATACCACT GGACACAACA GTTTTAAAGT TCACCAAGCC TGAGTTGGAT 
GCATGTGATG TACCAGAAAA ATATCCTCAG CTGTTCCAAG TGACACTGGA TATAGAAGTA 
CAGCCCCAAG ACAAAGTGAT CGACCTAACT CCACCATGGG AGCACTACTG CACAAAGGAT 
GTGAACCCCA GCATCCTCTT CTCCTCTCAG CAGGAGCATC AGGATACTCT GGCCTTAGGG 
GGTCAGGCTC CAGCAGATCT CCCTCCAGAC CATCCGAGGA ATCTTGGGCA AGGAGGCTTC 
TTTGCCTCTC TGTGTTGGCA AGATCAGAAA TCAGAGAAGT CACGGTGTGA GGAGGACCAC 
GCAGCCCTGG TGAATCAGGA AAGCGAGCAG TCGGATGATG AACTACTGAC TCTCTCAAGC 
CCACATGGCA ATGCTGATGG TGACAAGCCT CATGGAGCCA AGAAGCCTGG CAAAAAGCAG 
CAGGAGCCAG CTGCGCCTCC TCCCCCAGAG GAGGTGGACC TTCTGGGCCT GGAAGGGTCC 
GATGTGAGCA CGAACTTCTC CCCCTTGGCA GCTCCTCCCA GCAATTCTGA ACTGCTGAGT 
GACCTGTTTG GGGGTGGAGG TGCCACAGGT CCTGCCCAGG CAGGACAGGT TGGAGTCGAA 
GATGTGTTTC ACCCAAGTGG ACCTGCGTCT GCGCAGTCCA CACCACGCCG AGCCACCACT 
TCCGCCTCTG CATCGCCAAC CCTAAGAGTG GGAGAAGGTG CCACCTTTGA CCCTTTTGGA 
GCCCCTGCTA AGCCACCAGG TCAGGATTTG TTGGGCTCCT TCCTGAACAC ATCCAATGCT 
TCTAGCGACC CCTTTCTGCA GCCCACGAGA AGCCCTTCCC CTACAGTGCA TGCTTCTAGC 
ACTCCTGCTG TGAACATCCA ACCAGACATT GCTGGAGGTT GGGACTGGCA TGCCAAACCA 
GGAGGTTTTG GGATGGGAAG CAAATCGGCT GCCACCAGCC CAACAGGCTC AACACACGGC 
ACCCCTACCC ATCAGAGCAA GCCCCAGACT CTGGATCCCT TCGCTGACTT GGGGACACTA 
GGCAGCTCTT CATTTGCCAG CAAACCCACC ACACCAACTG GATTGGGTGG AGGATTTCCA 
CCTCTCAGCT CACCACAGAA AGCGTCCCCA CAGCCCATGG GTGGAGGGTG GCAGCAGCCA 
GCCGGCTACA ACTGGCAGCA GGCACAGCCT AAGCCACAGT CTAGTATGCC TCACTCCTCC 
CCTCAGAACC GACCCAATTA CAACGTGAGC TTCTCAGCTA TGCCTGCAGG GCAGAGCGAC 
CGTGGAAAAG GATCTACTAA CTTAGAAGGA AAACAGAAGG CTGCTGACTT TGAAGATCTG 
CTTTCCAGTC AAGGCTTCAA TGCCCACAAA GACAAAAAGG GGCCTCGAAC AATAGCTGAG 
ATGAGAAAGG AGGAAATGGC TAAGGAAATG GATCCTGAGA AACTGAAGAT CCTGGAGTGG 
ATAGAAGGCA AAGAGAGAAA CATCAGAGCC CTGCTTTCCA CAATGCACAC TGTGCTGTGG 
GCTGGGGAGA CCAAGTGGAA ACCTGTGGGC ATGGCAGACC TGGTGACGCC AGAGCAAGTG 
AAGAAGGTGT ACAGGAGAGC CGTGCTAGTG GTGCACCCCG ACAAGGCTAC TGGGCAACCC 
TATGAACAAT ATGCAAAGAT GATCTTCATG GAGCTAAATG ATGCCTGGTC CGAATTTGAA 
AACCAAGGCC AAAAGCCCTT GTATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006238508.1
CDS	358..3264
Translation	MSLLGSYRKKTSSDGYESLQLVDSHGDSSARGAAAGTQRVTTGAVRSPARQPPHRASTTDSSGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLDFTYVTSRIIVMSFPMDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFNKQRNGCRPYCDVLIGETKIFSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRSTIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEVQPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGGQAPADLPPDHPRNLGQGGFFASLCWQDQKSEKSRCEEDHAALVNQESEQSDDELLTLSSPHGNADGDKPHGAKKPGKKQQEPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQVGVEDVFHPSGPASAQSTPRRATTSASASPTLRVGEGATFDPFGAPAKPPGQDLLGSFLNTSNASSDPFLQPTRSPSPTVHASSTPAVNIQPDIAGGWDWHAKPGGFGMGSKSAATSPTGSTHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQPAGYNWQQAQPKPQSSMPHSSPQNRPNYNVSFSAMPAGQSDRGKGSTNLEGKQKAADFEDLLSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY

Target ORF information:

RefSeq Version	XM_006238446.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006238446.3

ORF Insert Sequence:

ATGAGCCTCC TCGGGAGCTA CCGGAAAAAG ACCAGCAGCG ATGGTTATGA ATCTTTGCAG 
CTGGTGGACA GTCACGGGGA CTCGAGCGCA CGGGGCGCGG CGGCTGGCAC GCAGAGGGTG 
ACCACGGGCG CGGTGCGTAG TCCCGCCCGG CAGCCTCCGC ACCGCGCCAG CACCACGGAC 
AGCTCAGGTG CCTCATCTCC AGACATGGAG CCCAGCTATG GGGGAGGCCT TTTTGATATG 
GTGAAAGGTG GTGCAGGTAG GCTATTCAGT AACCTGAAGG ACAACTTGAA AGACACCCTC 
AAAGATACAT CCTCCAGAGT CATCCAGTCT GTTAGCAGCT ACACAAAGGG AGACCTAGAC 
TTTACTTATG TCACTTCCAG GATTATCGTG ATGTCCTTTC CTATGGACAG TGTTGACATA 
GGATTCAGGA ATCAGGTTGA TGACATCCGT AGCTTTTTGG ATTCCAGACA TCTTGACCAC 
TACACAGTAT ACAACTTGTC ACCCAAGTCT TACCGAACTG CCAAGTTCCA CAGCCGGGTC 
TCAGAGTGCA GTTGGCCCAT CAGGCAGGCC CCAAGTCTAC ACAACCTGTT TGCTGTGTGT 
CGGAATATGT ATAACTGGCT GCTGCAGAAT CCCAAAAATG TCTGTGTTGT CCACTGCTTG 
GATGGACGGG CCGCATCATC AATTCTGGTT GGTGCTATGT TCATTTTCTG TAATCTCTAC 
TCTACGCCTG GCCCTGCTGT TCGATTACTC TACGCAAAGC GACCAGGAAT TGGACTGTCT 
CCGTCCCACA GGAGGTACTT AGGCTACATG TGTGACCTAC TTGCAGATAA GCCCTACCGT 
CCTCACTTCA AGCCGCTCAC AATCAAGGCA ATCACTGTCA GCCCAATTCC CTTCTTCAAT 
AAACAGAGGA ATGGGTGCCG CCCTTACTGT GACGTACTGA TTGGAGAAAC TAAAATATTC 
TCAACATGCA CAGACTTCGA ACGAATGAAA GAATACCGTG TCCAAGATGG GAAAATCTTC 
ATCCCTCTGA ACATCACAGT CCAAGGTGAC GTCATTGTTT CCATGTACCA CTTGCGGTCA 
ACCATCGGGA GCCGGCTGCA GGCTAAGGTG ACCAACACAC AGATATTCCA GCTCCAGTTT 
CATTCTGGAT TTATACCACT GGACACAACA GTTTTAAAGT TCACCAAGCC TGAGTTGGAT 
GCATGTGATG TACCAGAAAA ATATCCTCAG CTGTTCCAAG TGACACTGGA TATAGAAGTA 
CAGCCCCAAG ACAAAGTGAT CGACCTAACT CCACCATGGG AGCACTACTG CACAAAGGAT 
GTGAACCCCA GCATCCTCTT CTCCTCTCAG CAGGAGCATC AGGATACTCT GGCCTTAGGG 
GGTCAGGCTC CAGCAGATCT CCCTCCAGAC CATCCGAGGA ATCTTGGGCA AGGAGGCTTC 
TTTGCCTCTC TGTGTTGGCA AGATCAGAAA TCAGAGAAGT CACGGTGTGA GGAGGACCAC 
GCAGCCCTGG TGAATCAGGA AAGCGAGCAG TCGGATGATG AACTACTGAC TCTCTCAAGC 
CCACATGGCA ATGCTGATGG TGACAAGCCT CATGGAGCCA AGAAGCCTGG CAAAAAGCAG 
CAGGAGCCAG CTGCGCCTCC TCCCCCAGAG GAGGTGGACC TTCTGGGCCT GGAAGGGTCC 
GATGTGAGCA CGAACTTCTC CCCCTTGGCA GCTCCTCCCA GCAATTCTGA ACTGCTGAGT 
GACCTGTTTG GGGGTGGAGG TGCCACAGGT CCTGCCCAGG CAGGACAGGT TGGAGTCGAA 
GATGTGTTTC ACCCAAGTGG ACCTGCGTCT GCGCAGTCCA CACCACGCCG AGCCACCACT 
TCCGCCTCTG CATCGCCAAC CCTAAGAGTG GGAGAAGGTG CCACCTTTGA CCCTTTTGGA 
GCCCCTGCTA AGCCACCAGG TCAGGATTTG TTGGGCTCCT TCCTGAACAC ATCCAATGCT 
TCTAGCGACC CCTTTCTGCA GCCCACGAGA AGCCCTTCCC CTACAGTGCA TGCTTCTAGC 
ACTCCTGCTG TGAACATCCA ACCAGACATT GCTGGAGGTT GGGACTGGCA TGCCAAACCA 
GGAGGTTTTG GGATGGGAAG CAAATCGGCT GCCACCAGCC CAACAGGCTC AACACACGGC 
ACCCCTACCC ATCAGAGCAA GCCCCAGACT CTGGATCCCT TCGCTGACTT GGGGACACTA 
GGCAGCTCTT CATTTGCCAG CAAACCCACC ACACCAACTG GATTGGGTGG AGGATTTCCA 
CCTCTCAGCT CACCACAGAA AGCGTCCCCA CAGCCCATGG GTGGAGGGTG GCAGCAGCCA 
GCCGGCTACA ACTGGCAGCA GGCACAGCCT AAGCCACAGT CTAGTATGCC TCACTCCTCC 
CCTCAGAACC GACCCAATTA CAACGTGAGC TTCTCAGCTA TGCCTGCAGG GCAGAGCGAC 
CGTGGAAAAG GATCTACTAA CTTAGAAGGA AAACAGAAGG CTGCTGACTT TGAAGATCTG 
CTTTCCAGTC AAGGCTTCAA TGCCCACAAA GACAAAAAGG GGCCTCGAAC AATAGCTGAG 
ATGAGAAAGG AGGAAATGGC TAAGGAAATG GATCCTGAGA AACTGAAGAT CCTGGAGTGG 
ATAGAAGGCA AAGAGAGAAA CATCAGAGCC CTGCTTTCCA CAATGCACAC TGTGCTGTGG 
GCTGGGGAGA CCAAGTGGAA ACCTGTGGGC ATGGCAGACC TGGTGACGCC AGAGCAAGTG 
AAGAAGGTGT ACAGGAGAGC CGTGCTAGTG GTGCACCCCG ACAAGGCTAC TGGGCAACCC 
TATGAACAAT ATGCAAAGAT GATCTTCATG GAGCTAAATG ATGCCTGGTC CGAATTTGAA 
AACCAAGGCC AAAAGCCCTT GTATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Dnajc6 ( XM_006238448.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006238510.1 Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa28353
Clone ID Related Accession (Same CDS sequence)	XM_006238448.3
Accession Version	XM_006238448.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2817bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	putative tyrosine-protein phosphatase auxilin isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006238448.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACAAATC CAAAGTCAGG GGTTGCAGAG TCAGCCGGAC TTGCCTGCTC TCGTGCAGCA 
GCGGGAGGAA ACAGAATGAA AGATTCTGAA AATAAAGGTG CCTCATCTCC AGACATGGAG 
CCCAGCTATG GGGGAGGCCT TTTTGATATG GTGAAAGGTG GTGCAGGTAG GCTATTCAGT 
AACCTGAAGG ACAACTTGAA AGACACCCTC AAAGATACAT CCTCCAGAGT CATCCAGTCT 
GTTAGCAGCT ACACAAAGGG AGACCTAGAC TTTACTTATG TCACTTCCAG GATTATCGTG 
ATGTCCTTTC CTATGGACAG TGTTGACATA GGATTCAGGA ATCAGGTTGA TGACATCCGT 
AGCTTTTTGG ATTCCAGACA TCTTGACCAC TACACAGTAT ACAACTTGTC ACCCAAGTCT 
TACCGAACTG CCAAGTTCCA CAGCCGGGTC TCAGAGTGCA GTTGGCCCAT CAGGCAGGCC 
CCAAGTCTAC ACAACCTGTT TGCTGTGTGT CGGAATATGT ATAACTGGCT GCTGCAGAAT 
CCCAAAAATG TCTGTGTTGT CCACTGCTTG GATGGACGGG CCGCATCATC AATTCTGGTT 
GGTGCTATGT TCATTTTCTG TAATCTCTAC TCTACGCCTG GCCCTGCTGT TCGATTACTC 
TACGCAAAGC GACCAGGAAT TGGACTGTCT CCGTCCCACA GGAGGTACTT AGGCTACATG 
TGTGACCTAC TTGCAGATAA GCCCTACCGT CCTCACTTCA AGCCGCTCAC AATCAAGGCA 
ATCACTGTCA GCCCAATTCC CTTCTTCAAT AAACAGAGGA ATGGGTGCCG CCCTTACTGT 
GACGTACTGA TTGGAGAAAC TAAAATATTC TCAACATGCA CAGACTTCGA ACGAATGAAA 
GAATACCGTG TCCAAGATGG GAAAATCTTC ATCCCTCTGA ACATCACAGT CCAAGGTGAC 
GTCATTGTTT CCATGTACCA CTTGCGGTCA ACCATCGGGA GCCGGCTGCA GGCTAAGGTG 
ACCAACACAC AGATATTCCA GCTCCAGTTT CATTCTGGAT TTATACCACT GGACACAACA 
GTTTTAAAGT TCACCAAGCC TGAGTTGGAT GCATGTGATG TACCAGAAAA ATATCCTCAG 
CTGTTCCAAG TGACACTGGA TATAGAAGTA CAGCCCCAAG ACAAAGTGAT CGACCTAACT 
CCACCATGGG AGCACTACTG CACAAAGGAT GTGAACCCCA GCATCCTCTT CTCCTCTCAG 
CAGGAGCATC AGGATACTCT GGCCTTAGGG GGTCAGGCTC CAGCAGATCT CCCTCCAGAC 
CATCCGAGGA ATCTTGGGCA AGGAGGCTTC TTTGCCTCTC TGTGTTGGCA AGATCAGAAA 
TCAGAGAAGT CACGGTGTGA GGAGGACCAC GCAGCCCTGG TGAATCAGGA AAGCGAGCAG 
TCGGATGATG AACTACTGAC TCTCTCAAGC CCACATGGCA ATGCTGATGG TGACAAGCCT 
CATGGAGCCA AGAAGCCTGG CAAAAAGCAG CAGGAGCCAG CTGCGCCTCC TCCCCCAGAG 
GAGGTGGACC TTCTGGGCCT GGAAGGGTCC GATGTGAGCA CGAACTTCTC CCCCTTGGCA 
GCTCCTCCCA GCAATTCTGA ACTGCTGAGT GACCTGTTTG GGGGTGGAGG TGCCACAGGT 
CCTGCCCAGG CAGGACAGGT TGGAGTCGAA GATGTGTTTC ACCCAAGTGG ACCTGCGTCT 
GCGCAGTCCA CACCACGCCG AGCCACCACT TCCGCCTCTG CATCGCCAAC CCTAAGAGTG 
GGAGAAGGTG CCACCTTTGA CCCTTTTGGA GCCCCTGCTA AGCCACCAGG TCAGGATTTG 
TTGGGCTCCT TCCTGAACAC ATCCAATGCT TCTAGCGACC CCTTTCTGCA GCCCACGAGA 
AGCCCTTCCC CTACAGTGCA TGCTTCTAGC ACTCCTGCTG TGAACATCCA ACCAGACATT 
GCTGGAGGTT GGGACTGGCA TGCCAAACCA GGAGGTTTTG GGATGGGAAG CAAATCGGCT 
GCCACCAGCC CAACAGGCTC AACACACGGC ACCCCTACCC ATCAGAGCAA GCCCCAGACT 
CTGGATCCCT TCGCTGACTT GGGGACACTA GGCAGCTCTT CATTTGCCAG CAAACCCACC 
ACACCAACTG GATTGGGTGG AGGATTTCCA CCTCTCAGCT CACCACAGAA AGCGTCCCCA 
CAGCCCATGG GTGGAGGGTG GCAGCAGCCA GCCGGCTACA ACTGGCAGCA GGCACAGCCT 
AAGCCACAGT CTAGTATGCC TCACTCCTCC CCTCAGAACC GACCCAATTA CAACGTGAGC 
TTCTCAGCTA TGCCTGCAGG GCAGAGCGAC CGTGGAAAAG GATCTACTAA CTTAGAAGGA 
AAACAGAAGG CTGCTGACTT TGAAGATCTG CTTTCCAGTC AAGGCTTCAA TGCCCACAAA 
GACAAAAAGG GGCCTCGAAC AATAGCTGAG ATGAGAAAGG AGGAAATGGC TAAGGAAATG 
GATCCTGAGA AACTGAAGAT CCTGGAGTGG ATAGAAGGCA AAGAGAGAAA CATCAGAGCC 
CTGCTTTCCA CAATGCACAC TGTGCTGTGG GCTGGGGAGA CCAAGTGGAA ACCTGTGGGC 
ATGGCAGACC TGGTGACGCC AGAGCAAGTG AAGAAGGTGT ACAGGAGAGC CGTGCTAGTG 
GTGCACCCCG ACAAGGCTAC TGGGCAACCC TATGAACAAT ATGCAAAGAT GATCTTCATG 
GAGCTAAATG ATGCCTGGTC CGAATTTGAA AACCAAGGCC AAAAGCCCTT GTATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006238510.1
CDS	972..3788
Translation	MTNPKSGVAESAGLACSRAAAGGNRMKDSENKGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLDFTYVTSRIIVMSFPMDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFNKQRNGCRPYCDVLIGETKIFSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRSTIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEVQPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGGQAPADLPPDHPRNLGQGGFFASLCWQDQKSEKSRCEEDHAALVNQESEQSDDELLTLSSPHGNADGDKPHGAKKPGKKQQEPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQVGVEDVFHPSGPASAQSTPRRATTSASASPTLRVGEGATFDPFGAPAKPPGQDLLGSFLNTSNASSDPFLQPTRSPSPTVHASSTPAVNIQPDIAGGWDWHAKPGGFGMGSKSAATSPTGSTHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQPAGYNWQQAQPKPQSSMPHSSPQNRPNYNVSFSAMPAGQSDRGKGSTNLEGKQKAADFEDLLSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY

Target ORF information:

RefSeq Version	XM_006238448.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006238448.3

ORF Insert Sequence:

ATGACAAATC CAAAGTCAGG GGTTGCAGAG TCAGCCGGAC TTGCCTGCTC TCGTGCAGCA 
GCGGGAGGAA ACAGAATGAA AGATTCTGAA AATAAAGGTG CCTCATCTCC AGACATGGAG 
CCCAGCTATG GGGGAGGCCT TTTTGATATG GTGAAAGGTG GTGCAGGTAG GCTATTCAGT 
AACCTGAAGG ACAACTTGAA AGACACCCTC AAAGATACAT CCTCCAGAGT CATCCAGTCT 
GTTAGCAGCT ACACAAAGGG AGACCTAGAC TTTACTTATG TCACTTCCAG GATTATCGTG 
ATGTCCTTTC CTATGGACAG TGTTGACATA GGATTCAGGA ATCAGGTTGA TGACATCCGT 
AGCTTTTTGG ATTCCAGACA TCTTGACCAC TACACAGTAT ACAACTTGTC ACCCAAGTCT 
TACCGAACTG CCAAGTTCCA CAGCCGGGTC TCAGAGTGCA GTTGGCCCAT CAGGCAGGCC 
CCAAGTCTAC ACAACCTGTT TGCTGTGTGT CGGAATATGT ATAACTGGCT GCTGCAGAAT 
CCCAAAAATG TCTGTGTTGT CCACTGCTTG GATGGACGGG CCGCATCATC AATTCTGGTT 
GGTGCTATGT TCATTTTCTG TAATCTCTAC TCTACGCCTG GCCCTGCTGT TCGATTACTC 
TACGCAAAGC GACCAGGAAT TGGACTGTCT CCGTCCCACA GGAGGTACTT AGGCTACATG 
TGTGACCTAC TTGCAGATAA GCCCTACCGT CCTCACTTCA AGCCGCTCAC AATCAAGGCA 
ATCACTGTCA GCCCAATTCC CTTCTTCAAT AAACAGAGGA ATGGGTGCCG CCCTTACTGT 
GACGTACTGA TTGGAGAAAC TAAAATATTC TCAACATGCA CAGACTTCGA ACGAATGAAA 
GAATACCGTG TCCAAGATGG GAAAATCTTC ATCCCTCTGA ACATCACAGT CCAAGGTGAC 
GTCATTGTTT CCATGTACCA CTTGCGGTCA ACCATCGGGA GCCGGCTGCA GGCTAAGGTG 
ACCAACACAC AGATATTCCA GCTCCAGTTT CATTCTGGAT TTATACCACT GGACACAACA 
GTTTTAAAGT TCACCAAGCC TGAGTTGGAT GCATGTGATG TACCAGAAAA ATATCCTCAG 
CTGTTCCAAG TGACACTGGA TATAGAAGTA CAGCCCCAAG ACAAAGTGAT CGACCTAACT 
CCACCATGGG AGCACTACTG CACAAAGGAT GTGAACCCCA GCATCCTCTT CTCCTCTCAG 
CAGGAGCATC AGGATACTCT GGCCTTAGGG GGTCAGGCTC CAGCAGATCT CCCTCCAGAC 
CATCCGAGGA ATCTTGGGCA AGGAGGCTTC TTTGCCTCTC TGTGTTGGCA AGATCAGAAA 
TCAGAGAAGT CACGGTGTGA GGAGGACCAC GCAGCCCTGG TGAATCAGGA AAGCGAGCAG 
TCGGATGATG AACTACTGAC TCTCTCAAGC CCACATGGCA ATGCTGATGG TGACAAGCCT 
CATGGAGCCA AGAAGCCTGG CAAAAAGCAG CAGGAGCCAG CTGCGCCTCC TCCCCCAGAG 
GAGGTGGACC TTCTGGGCCT GGAAGGGTCC GATGTGAGCA CGAACTTCTC CCCCTTGGCA 
GCTCCTCCCA GCAATTCTGA ACTGCTGAGT GACCTGTTTG GGGGTGGAGG TGCCACAGGT 
CCTGCCCAGG CAGGACAGGT TGGAGTCGAA GATGTGTTTC ACCCAAGTGG ACCTGCGTCT 
GCGCAGTCCA CACCACGCCG AGCCACCACT TCCGCCTCTG CATCGCCAAC CCTAAGAGTG 
GGAGAAGGTG CCACCTTTGA CCCTTTTGGA GCCCCTGCTA AGCCACCAGG TCAGGATTTG 
TTGGGCTCCT TCCTGAACAC ATCCAATGCT TCTAGCGACC CCTTTCTGCA GCCCACGAGA 
AGCCCTTCCC CTACAGTGCA TGCTTCTAGC ACTCCTGCTG TGAACATCCA ACCAGACATT 
GCTGGAGGTT GGGACTGGCA TGCCAAACCA GGAGGTTTTG GGATGGGAAG CAAATCGGCT 
GCCACCAGCC CAACAGGCTC AACACACGGC ACCCCTACCC ATCAGAGCAA GCCCCAGACT 
CTGGATCCCT TCGCTGACTT GGGGACACTA GGCAGCTCTT CATTTGCCAG CAAACCCACC 
ACACCAACTG GATTGGGTGG AGGATTTCCA CCTCTCAGCT CACCACAGAA AGCGTCCCCA 
CAGCCCATGG GTGGAGGGTG GCAGCAGCCA GCCGGCTACA ACTGGCAGCA GGCACAGCCT 
AAGCCACAGT CTAGTATGCC TCACTCCTCC CCTCAGAACC GACCCAATTA CAACGTGAGC 
TTCTCAGCTA TGCCTGCAGG GCAGAGCGAC CGTGGAAAAG GATCTACTAA CTTAGAAGGA 
AAACAGAAGG CTGCTGACTT TGAAGATCTG CTTTCCAGTC AAGGCTTCAA TGCCCACAAA 
GACAAAAAGG GGCCTCGAAC AATAGCTGAG ATGAGAAAGG AGGAAATGGC TAAGGAAATG 
GATCCTGAGA AACTGAAGAT CCTGGAGTGG ATAGAAGGCA AAGAGAGAAA CATCAGAGCC 
CTGCTTTCCA CAATGCACAC TGTGCTGTGG GCTGGGGAGA CCAAGTGGAA ACCTGTGGGC 
ATGGCAGACC TGGTGACGCC AGAGCAAGTG AAGAAGGTGT ACAGGAGAGC CGTGCTAGTG 
GTGCACCCCG ACAAGGCTAC TGGGCAACCC TATGAACAAT ATGCAAAGAT GATCTTCATG 
GAGCTAAATG ATGCCTGGTC CGAATTTGAA AACCAAGGCC AAAAGCCCTT GTATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Dnajc6 ( XM_006238449.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006238511.1 Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ORa28354
Clone ID Related Accession (Same CDS sequence)	XM_006238449.3
Accession Version	XM_006238449.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2703bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	putative tyrosine-protein phosphatase auxilin isoform X4
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006238449.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGCCCA GCTATGGGGG AGGCCTTTTT GATATGGTGA AAGGTGGTGC AGGTAGGCTA 
TTCAGTAACC TGAAGGACAA CTTGAAAGAC ACCCTCAAAG ATACATCCTC CAGAGTCATC 
CAGTCTGTTA GCAGCTACAC AAAGGGAGAC CTAGACTTTA CTTATGTCAC TTCCAGGATT 
ATCGTGATGT CCTTTCCTAT GGACAGTGTT GACATAGGAT TCAGGAATCA GGTTGATGAC 
ATCCGTAGCT TTTTGGATTC CAGACATCTT GACCACTACA CAGTATACAA CTTGTCACCC 
AAGTCTTACC GAACTGCCAA GTTCCACAGC CGGGTCTCAG AGTGCAGTTG GCCCATCAGG 
CAGGCCCCAA GTCTACACAA CCTGTTTGCT GTGTGTCGGA ATATGTATAA CTGGCTGCTG 
CAGAATCCCA AAAATGTCTG TGTTGTCCAC TGCTTGGATG GACGGGCCGC ATCATCAATT 
CTGGTTGGTG CTATGTTCAT TTTCTGTAAT CTCTACTCTA CGCCTGGCCC TGCTGTTCGA 
TTACTCTACG CAAAGCGACC AGGAATTGGA CTGTCTCCGT CCCACAGGAG GTACTTAGGC 
TACATGTGTG ACCTACTTGC AGATAAGCCC TACCGTCCTC ACTTCAAGCC GCTCACAATC 
AAGGCAATCA CTGTCAGCCC AATTCCCTTC TTCAATAAAC AGAGGAATGG GTGCCGCCCT 
TACTGTGACG TACTGATTGG AGAAACTAAA ATATTCTCAA CATGCACAGA CTTCGAACGA 
ATGAAAGAAT ACCGTGTCCA AGATGGGAAA ATCTTCATCC CTCTGAACAT CACAGTCCAA 
GGTGACGTCA TTGTTTCCAT GTACCACTTG CGGTCAACCA TCGGGAGCCG GCTGCAGGCT 
AAGGTGACCA ACACACAGAT ATTCCAGCTC CAGTTTCATT CTGGATTTAT ACCACTGGAC 
ACAACAGTTT TAAAGTTCAC CAAGCCTGAG TTGGATGCAT GTGATGTACC AGAAAAATAT 
CCTCAGCTGT TCCAAGTGAC ACTGGATATA GAAGTACAGC CCCAAGACAA AGTGATCGAC 
CTAACTCCAC CATGGGAGCA CTACTGCACA AAGGATGTGA ACCCCAGCAT CCTCTTCTCC 
TCTCAGCAGG AGCATCAGGA TACTCTGGCC TTAGGGGGTC AGGCTCCAGC AGATCTCCCT 
CCAGACCATC CGAGGAATCT TGGGCAAGGA GGCTTCTTTG CCTCTCTGTG TTGGCAAGAT 
CAGAAATCAG AGAAGTCACG GTGTGAGGAG GACCACGCAG CCCTGGTGAA TCAGGAAAGC 
GAGCAGTCGG ATGATGAACT ACTGACTCTC TCAAGCCCAC ATGGCAATGC TGATGGTGAC 
AAGCCTCATG GAGCCAAGAA GCCTGGCAAA AAGCAGCAGG AGCCAGCTGC GCCTCCTCCC 
CCAGAGGAGG TGGACCTTCT GGGCCTGGAA GGGTCCGATG TGAGCACGAA CTTCTCCCCC 
TTGGCAGCTC CTCCCAGCAA TTCTGAACTG CTGAGTGACC TGTTTGGGGG TGGAGGTGCC 
ACAGGTCCTG CCCAGGCAGG ACAGGTTGGA GTCGAAGATG TGTTTCACCC AAGTGGACCT 
GCGTCTGCGC AGTCCACACC ACGCCGAGCC ACCACTTCCG CCTCTGCATC GCCAACCCTA 
AGAGTGGGAG AAGGTGCCAC CTTTGACCCT TTTGGAGCCC CTGCTAAGCC ACCAGGTCAG 
GATTTGTTGG GCTCCTTCCT GAACACATCC AATGCTTCTA GCGACCCCTT TCTGCAGCCC 
ACGAGAAGCC CTTCCCCTAC AGTGCATGCT TCTAGCACTC CTGCTGTGAA CATCCAACCA 
GACATTGCTG GAGGTTGGGA CTGGCATGCC AAACCAGGAG GTTTTGGGAT GGGAAGCAAA 
TCGGCTGCCA CCAGCCCAAC AGGCTCAACA CACGGCACCC CTACCCATCA GAGCAAGCCC 
CAGACTCTGG ATCCCTTCGC TGACTTGGGG ACACTAGGCA GCTCTTCATT TGCCAGCAAA 
CCCACCACAC CAACTGGATT GGGTGGAGGA TTTCCACCTC TCAGCTCACC ACAGAAAGCG 
TCCCCACAGC CCATGGGTGG AGGGTGGCAG CAGCCAGCCG GCTACAACTG GCAGCAGGCA 
CAGCCTAAGC CACAGTCTAG TATGCCTCAC TCCTCCCCTC AGAACCGACC CAATTACAAC 
GTGAGCTTCT CAGCTATGCC TGCAGGGCAG AGCGACCGTG GAAAAGGATC TACTAACTTA 
GAAGGAAAAC AGAAGGCTGC TGACTTTGAA GATCTGCTTT CCAGTCAAGG CTTCAATGCC 
CACAAAGACA AAAAGGGGCC TCGAACAATA GCTGAGATGA GAAAGGAGGA AATGGCTAAG 
GAAATGGATC CTGAGAAACT GAAGATCCTG GAGTGGATAG AAGGCAAAGA GAGAAACATC 
AGAGCCCTGC TTTCCACAAT GCACACTGTG CTGTGGGCTG GGGAGACCAA GTGGAAACCT 
GTGGGCATGG CAGACCTGGT GACGCCAGAG CAAGTGAAGA AGGTGTACAG GAGAGCCGTG 
CTAGTGGTGC ACCCCGACAA GGCTACTGGG CAACCCTATG AACAATATGC AAAGATGATC 
TTCATGGAGC TAAATGATGC CTGGTCCGAA TTTGAAAACC AAGGCCAAAA GCCCTTGTAT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006238511.1
CDS	1151..3853
Translation	MEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLDFTYVTSRIIVMSFPMDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFNKQRNGCRPYCDVLIGETKIFSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRSTIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEVQPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGGQAPADLPPDHPRNLGQGGFFASLCWQDQKSEKSRCEEDHAALVNQESEQSDDELLTLSSPHGNADGDKPHGAKKPGKKQQEPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQVGVEDVFHPSGPASAQSTPRRATTSASASPTLRVGEGATFDPFGAPAKPPGQDLLGSFLNTSNASSDPFLQPTRSPSPTVHASSTPAVNIQPDIAGGWDWHAKPGGFGMGSKSAATSPTGSTHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQPAGYNWQQAQPKPQSSMPHSSPQNRPNYNVSFSAMPAGQSDRGKGSTNLEGKQKAADFEDLLSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY

Target ORF information:

RefSeq Version	XM_006238449.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006238449.3

ORF Insert Sequence:

ATGGAGCCCA GCTATGGGGG AGGCCTTTTT GATATGGTGA AAGGTGGTGC AGGTAGGCTA 
TTCAGTAACC TGAAGGACAA CTTGAAAGAC ACCCTCAAAG ATACATCCTC CAGAGTCATC 
CAGTCTGTTA GCAGCTACAC AAAGGGAGAC CTAGACTTTA CTTATGTCAC TTCCAGGATT 
ATCGTGATGT CCTTTCCTAT GGACAGTGTT GACATAGGAT TCAGGAATCA GGTTGATGAC 
ATCCGTAGCT TTTTGGATTC CAGACATCTT GACCACTACA CAGTATACAA CTTGTCACCC 
AAGTCTTACC GAACTGCCAA GTTCCACAGC CGGGTCTCAG AGTGCAGTTG GCCCATCAGG 
CAGGCCCCAA GTCTACACAA CCTGTTTGCT GTGTGTCGGA ATATGTATAA CTGGCTGCTG 
CAGAATCCCA AAAATGTCTG TGTTGTCCAC TGCTTGGATG GACGGGCCGC ATCATCAATT 
CTGGTTGGTG CTATGTTCAT TTTCTGTAAT CTCTACTCTA CGCCTGGCCC TGCTGTTCGA 
TTACTCTACG CAAAGCGACC AGGAATTGGA CTGTCTCCGT CCCACAGGAG GTACTTAGGC 
TACATGTGTG ACCTACTTGC AGATAAGCCC TACCGTCCTC ACTTCAAGCC GCTCACAATC 
AAGGCAATCA CTGTCAGCCC AATTCCCTTC TTCAATAAAC AGAGGAATGG GTGCCGCCCT 
TACTGTGACG TACTGATTGG AGAAACTAAA ATATTCTCAA CATGCACAGA CTTCGAACGA 
ATGAAAGAAT ACCGTGTCCA AGATGGGAAA ATCTTCATCC CTCTGAACAT CACAGTCCAA 
GGTGACGTCA TTGTTTCCAT GTACCACTTG CGGTCAACCA TCGGGAGCCG GCTGCAGGCT 
AAGGTGACCA ACACACAGAT ATTCCAGCTC CAGTTTCATT CTGGATTTAT ACCACTGGAC 
ACAACAGTTT TAAAGTTCAC CAAGCCTGAG TTGGATGCAT GTGATGTACC AGAAAAATAT 
CCTCAGCTGT TCCAAGTGAC ACTGGATATA GAAGTACAGC CCCAAGACAA AGTGATCGAC 
CTAACTCCAC CATGGGAGCA CTACTGCACA AAGGATGTGA ACCCCAGCAT CCTCTTCTCC 
TCTCAGCAGG AGCATCAGGA TACTCTGGCC TTAGGGGGTC AGGCTCCAGC AGATCTCCCT 
CCAGACCATC CGAGGAATCT TGGGCAAGGA GGCTTCTTTG CCTCTCTGTG TTGGCAAGAT 
CAGAAATCAG AGAAGTCACG GTGTGAGGAG GACCACGCAG CCCTGGTGAA TCAGGAAAGC 
GAGCAGTCGG ATGATGAACT ACTGACTCTC TCAAGCCCAC ATGGCAATGC TGATGGTGAC 
AAGCCTCATG GAGCCAAGAA GCCTGGCAAA AAGCAGCAGG AGCCAGCTGC GCCTCCTCCC 
CCAGAGGAGG TGGACCTTCT GGGCCTGGAA GGGTCCGATG TGAGCACGAA CTTCTCCCCC 
TTGGCAGCTC CTCCCAGCAA TTCTGAACTG CTGAGTGACC TGTTTGGGGG TGGAGGTGCC 
ACAGGTCCTG CCCAGGCAGG ACAGGTTGGA GTCGAAGATG TGTTTCACCC AAGTGGACCT 
GCGTCTGCGC AGTCCACACC ACGCCGAGCC ACCACTTCCG CCTCTGCATC GCCAACCCTA 
AGAGTGGGAG AAGGTGCCAC CTTTGACCCT TTTGGAGCCC CTGCTAAGCC ACCAGGTCAG 
GATTTGTTGG GCTCCTTCCT GAACACATCC AATGCTTCTA GCGACCCCTT TCTGCAGCCC 
ACGAGAAGCC CTTCCCCTAC AGTGCATGCT TCTAGCACTC CTGCTGTGAA CATCCAACCA 
GACATTGCTG GAGGTTGGGA CTGGCATGCC AAACCAGGAG GTTTTGGGAT GGGAAGCAAA 
TCGGCTGCCA CCAGCCCAAC AGGCTCAACA CACGGCACCC CTACCCATCA GAGCAAGCCC 
CAGACTCTGG ATCCCTTCGC TGACTTGGGG ACACTAGGCA GCTCTTCATT TGCCAGCAAA 
CCCACCACAC CAACTGGATT GGGTGGAGGA TTTCCACCTC TCAGCTCACC ACAGAAAGCG 
TCCCCACAGC CCATGGGTGG AGGGTGGCAG CAGCCAGCCG GCTACAACTG GCAGCAGGCA 
CAGCCTAAGC CACAGTCTAG TATGCCTCAC TCCTCCCCTC AGAACCGACC CAATTACAAC 
GTGAGCTTCT CAGCTATGCC TGCAGGGCAG AGCGACCGTG GAAAAGGATC TACTAACTTA 
GAAGGAAAAC AGAAGGCTGC TGACTTTGAA GATCTGCTTT CCAGTCAAGG CTTCAATGCC 
CACAAAGACA AAAAGGGGCC TCGAACAATA GCTGAGATGA GAAAGGAGGA AATGGCTAAG 
GAAATGGATC CTGAGAAACT GAAGATCCTG GAGTGGATAG AAGGCAAAGA GAGAAACATC 
AGAGCCCTGC TTTCCACAAT GCACACTGTG CTGTGGGCTG GGGAGACCAA GTGGAAACCT 
GTGGGCATGG CAGACCTGGT GACGCCAGAG CAAGTGAAGA AGGTGTACAG GAGAGCCGTG 
CTAGTGGTGC ACCCCGACAA GGCTACTGGG CAACCCTATG AACAATATGC AAAGATGATC 
TTCATGGAGC TAAATGATGC CTGGTCCGAA TTTGAAAACC AAGGCCAAAA GCCCTTGTAT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Dnajc6 ( XM_006238447.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006238509.2 Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X2, mRNA.

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CloneID	ORa61218
Clone ID Related Accession (Same CDS sequence)	XM_006238447.3
Accession Version	XM_006238447.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2748bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	putative tyrosine-protein phosphatase auxilin isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006238447.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGATCGG CTTTCCGGGC GGAGCGGAGT GCCTCATCTC CAGACATGGA GCCCAGCTAT 
GGGGGAGGCC TTTTTGATAT GGTGAAAGGT GGTGCAGGTA GGCTATTCAG TAACCTGAAG 
GACAACTTGA AAGACACCCT CAAAGATACA TCCTCCAGAG TCATCCAGTC TGTTAGCAGC 
TACACAAAGG GAGACCTAGA CTTTACTTAT GTCACTTCCA GGATTATCGT GATGTCCTTT 
CCTATGGACA GTGTTGACAT AGGATTCAGG AATCAGGTTG ATGACATCCG TAGCTTTTTG 
GATTCCAGAC ATCTTGACCA CTACACAGTA TACAACTTGT CACCCAAGTC TTACCGAACT 
GCCAAGTTCC ACAGCCGGGT CTCAGAGTGC AGTTGGCCCA TCAGGCAGGC CCCAAGTCTA 
CACAACCTGT TTGCTGTGTG TCGGAATATG TATAACTGGC TGCTGCAGAA TCCCAAAAAT 
GTCTGTGTTG TCCACTGCTT GGATGGACGG GCCGCATCAT CAATTCTGGT TGGTGCTATG 
TTCATTTTCT GTAATCTCTA CTCTACGCCT GGCCCTGCTG TTCGATTACT CTACGCAAAG 
CGACCAGGAA TTGGACTGTC TCCGTCCCAC AGGAGGTACT TAGGCTACAT GTGTGACCTA 
CTTGCAGATA AGCCCTACCG TCCTCACTTC AAGCCGCTCA CAATCAAGGC AATCACTGTC 
AGCCCAATTC CCTTCTTCAA TAAACAGAGG AATGGGTGCC GCCCTTACTG TGACGTACTG 
ATTGGAGAAA CTAAAATATT CTCAACATGC ACAGACTTCG AACGAATGAA AGAATACCGT 
GTCCAAGATG GGAAAATCTT CATCCCTCTG AACATCACAG TCCAAGGTGA CGTCATTGTT 
TCCATGTACC ACTTGCGGTC AACCATCGGG AGCCGGCTGC AGGCTAAGGT GACCAACACA 
CAGATATTCC AGCTCCAGTT TCATTCTGGA TTTATACCAC TGGACACAAC AGTTTTAAAG 
TTCACCAAGC CTGAGTTGGA TGCATGTGAT GTACCAGAAA AATATCCTCA GCTGTTCCAA 
GTGACACTGG ATATAGAAGT ACAGCCCCAA GACAAAGTGA TCGACCTAAC TCCACCATGG 
GAGCACTACT GCACAAAGGA TGTGAACCCC AGCATCCTCT TCTCCTCTCA GCAGGAGCAT 
CAGGATACTC TGGCCTTAGG GGGTCAGGCT CCAGCAGATC TCCCTCCAGA CCATCCGAGG 
AATCTTGGGC AAGGAGGCTT CTTTGCCTCT CTGTGTTGGC AAGATCAGAA ATCAGAGAAG 
TCACGGTGTG AGGAGGACCA CGCAGCCCTG GTGAATCAGG AAAGCGAGCA GTCGGATGAT 
GAACTACTGA CTCTCTCAAG CCCACATGGC AATGCTGATG GTGACAAGCC TCATGGAGCC 
AAGAAGCCTG GCAAAAAGCA GCAGGAGCCA GCTGCGCCTC CTCCCCCAGA GGAGGTGGAC 
CTTCTGGGCC TGGAAGGGTC CGATGTGAGC ACGAACTTCT CCCCCTTGGC AGCTCCTCCC 
AGCAATTCTG AACTGCTGAG TGACCTGTTT GGGGGTGGAG GTGCCACAGG TCCTGCCCAG 
GCAGGACAGG TTGGAGTCGA AGATGTGTTT CACCCAAGTG GACCTGCGTC TGCGCAGTCC 
ACACCACGCC GAGCCACCAC TTCCGCCTCT GCATCGCCAA CCCTAAGAGT GGGAGAAGGT 
GCCACCTTTG ACCCTTTTGG AGCCCCTGCT AAGCCACCAG GTCAGGATTT GTTGGGCTCC 
TTCCTGAACA CATCCAATGC TTCTAGCGAC CCCTTTCTGC AGCCCACGAG AAGCCCTTCC 
CCTACAGTGC ATGCTTCTAG CACTCCTGCT GTGAACATCC AACCAGACAT TGCTGGAGGT 
TGGGACTGGC ATGCCAAACC AGGAGGTTTT GGGATGGGAA GCAAATCGGC TGCCACCAGC 
CCAACAGGCT CAACACACGG CACCCCTACC CATCAGAGCA AGCCCCAGAC TCTGGATCCC 
TTCGCTGACT TGGGGACACT AGGCAGCTCT TCATTTGCCA GCAAACCCAC CACACCAACT 
GGATTGGGTG GAGGATTTCC ACCTCTCAGC TCACCACAGA AAGCGTCCCC ACAGCCCATG 
GGTGGAGGGT GGCAGCAGCC AGCCGGCTAC AACTGGCAGC AGGCACAGCC TAAGCCACAG 
TCTAGTATGC CTCACTCCTC CCCTCAGAAC CGACCCAATT ACAACGTGAG CTTCTCAGCT 
ATGCCTGCAG GGCAGAGCGA CCGTGGAAAA GGATCTACTA ACTTAGAAGG AAAACAGAAG 
GCTGCTGACT TTGAAGATCT GCTTTCCAGT CAAGGCTTCA ATGCCCACAA AGACAAAAAG 
GGGCCTCGAA CAATAGCTGA GATGAGAAAG GAGGAAATGG CTAAGGAAAT GGATCCTGAG 
AAACTGAAGA TCCTGGAGTG GATAGAAGGC AAAGAGAGAA ACATCAGAGC CCTGCTTTCC 
ACAATGCACA CTGTGCTGTG GGCTGGGGAG ACCAAGTGGA AACCTGTGGG CATGGCAGAC 
CTGGTGACGC CAGAGCAAGT GAAGAAGGTG TACAGGAGAG CCGTGCTAGT GGTGCACCCC 
GACAAGGCTA CTGGGCAACC CTATGAACAA TATGCAAAGA TGATCTTCAT GGAGCTAAAT 
GATGCCTGGT CCGAATTTGA AAACCAAGGC CAAAAGCCCT TGTATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006238509.2
CDS	68..2815
Translation	MRSAFRAERSASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLDFTYVTSRIIVMSFPMDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFNKQRNGCRPYCDVLIGETKIFSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRSTIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEVQPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGGQAPADLPPDHPRNLGQGGFFASLCWQDQKSEKSRCEEDHAALVNQESEQSDDELLTLSSPHGNADGDKPHGAKKPGKKQQEPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQVGVEDVFHPSGPASAQSTPRRATTSASASPTLRVGEGATFDPFGAPAKPPGQDLLGSFLNTSNASSDPFLQPTRSPSPTVHASSTPAVNIQPDIAGGWDWHAKPGGFGMGSKSAATSPTGSTHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQPAGYNWQQAQPKPQSSMPHSSPQNRPNYNVSFSAMPAGQSDRGKGSTNLEGKQKAADFEDLLSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY

Target ORF information:

RefSeq Version	XM_006238447.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C6 (Dnajc6), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006238447.3

ORF Insert Sequence:

ATGCGATCGG CTTTCCGGGC GGAGCGGAGT GCCTCATCTC CAGACATGGA GCCCAGCTAT 
GGGGGAGGCC TTTTTGATAT GGTGAAAGGT GGTGCAGGTA GGCTATTCAG TAACCTGAAG 
GACAACTTGA AAGACACCCT CAAAGATACA TCCTCCAGAG TCATCCAGTC TGTTAGCAGC 
TACACAAAGG GAGACCTAGA CTTTACTTAT GTCACTTCCA GGATTATCGT GATGTCCTTT 
CCTATGGACA GTGTTGACAT AGGATTCAGG AATCAGGTTG ATGACATCCG TAGCTTTTTG 
GATTCCAGAC ATCTTGACCA CTACACAGTA TACAACTTGT CACCCAAGTC TTACCGAACT 
GCCAAGTTCC ACAGCCGGGT CTCAGAGTGC AGTTGGCCCA TCAGGCAGGC CCCAAGTCTA 
CACAACCTGT TTGCTGTGTG TCGGAATATG TATAACTGGC TGCTGCAGAA TCCCAAAAAT 
GTCTGTGTTG TCCACTGCTT GGATGGACGG GCCGCATCAT CAATTCTGGT TGGTGCTATG 
TTCATTTTCT GTAATCTCTA CTCTACGCCT GGCCCTGCTG TTCGATTACT CTACGCAAAG 
CGACCAGGAA TTGGACTGTC TCCGTCCCAC AGGAGGTACT TAGGCTACAT GTGTGACCTA 
CTTGCAGATA AGCCCTACCG TCCTCACTTC AAGCCGCTCA CAATCAAGGC AATCACTGTC 
AGCCCAATTC CCTTCTTCAA TAAACAGAGG AATGGGTGCC GCCCTTACTG TGACGTACTG 
ATTGGAGAAA CTAAAATATT CTCAACATGC ACAGACTTCG AACGAATGAA AGAATACCGT 
GTCCAAGATG GGAAAATCTT CATCCCTCTG AACATCACAG TCCAAGGTGA CGTCATTGTT 
TCCATGTACC ACTTGCGGTC AACCATCGGG AGCCGGCTGC AGGCTAAGGT GACCAACACA 
CAGATATTCC AGCTCCAGTT TCATTCTGGA TTTATACCAC TGGACACAAC AGTTTTAAAG 
TTCACCAAGC CTGAGTTGGA TGCATGTGAT GTACCAGAAA AATATCCTCA GCTGTTCCAA 
GTGACACTGG ATATAGAAGT ACAGCCCCAA GACAAAGTGA TCGACCTAAC TCCACCATGG 
GAGCACTACT GCACAAAGGA TGTGAACCCC AGCATCCTCT TCTCCTCTCA GCAGGAGCAT 
CAGGATACTC TGGCCTTAGG GGGTCAGGCT CCAGCAGATC TCCCTCCAGA CCATCCGAGG 
AATCTTGGGC AAGGAGGCTT CTTTGCCTCT CTGTGTTGGC AAGATCAGAA ATCAGAGAAG 
TCACGGTGTG AGGAGGACCA CGCAGCCCTG GTGAATCAGG AAAGCGAGCA GTCGGATGAT 
GAACTACTGA CTCTCTCAAG CCCACATGGC AATGCTGATG GTGACAAGCC TCATGGAGCC 
AAGAAGCCTG GCAAAAAGCA GCAGGAGCCA GCTGCGCCTC CTCCCCCAGA GGAGGTGGAC 
CTTCTGGGCC TGGAAGGGTC CGATGTGAGC ACGAACTTCT CCCCCTTGGC AGCTCCTCCC 
AGCAATTCTG AACTGCTGAG TGACCTGTTT GGGGGTGGAG GTGCCACAGG TCCTGCCCAG 
GCAGGACAGG TTGGAGTCGA AGATGTGTTT CACCCAAGTG GACCTGCGTC TGCGCAGTCC 
ACACCACGCC GAGCCACCAC TTCCGCCTCT GCATCGCCAA CCCTAAGAGT GGGAGAAGGT 
GCCACCTTTG ACCCTTTTGG AGCCCCTGCT AAGCCACCAG GTCAGGATTT GTTGGGCTCC 
TTCCTGAACA CATCCAATGC TTCTAGCGAC CCCTTTCTGC AGCCCACGAG AAGCCCTTCC 
CCTACAGTGC ATGCTTCTAG CACTCCTGCT GTGAACATCC AACCAGACAT TGCTGGAGGT 
TGGGACTGGC ATGCCAAACC AGGAGGTTTT GGGATGGGAA GCAAATCGGC TGCCACCAGC 
CCAACAGGCT CAACACACGG CACCCCTACC CATCAGAGCA AGCCCCAGAC TCTGGATCCC 
TTCGCTGACT TGGGGACACT AGGCAGCTCT TCATTTGCCA GCAAACCCAC CACACCAACT 
GGATTGGGTG GAGGATTTCC ACCTCTCAGC TCACCACAGA AAGCGTCCCC ACAGCCCATG 
GGTGGAGGGT GGCAGCAGCC AGCCGGCTAC AACTGGCAGC AGGCACAGCC TAAGCCACAG 
TCTAGTATGC CTCACTCCTC CCCTCAGAAC CGACCCAATT ACAACGTGAG CTTCTCAGCT 
ATGCCTGCAG GGCAGAGCGA CCGTGGAAAA GGATCTACTA ACTTAGAAGG AAAACAGAAG 
GCTGCTGACT TTGAAGATCT GCTTTCCAGT CAAGGCTTCA ATGCCCACAA AGACAAAAAG 
GGGCCTCGAA CAATAGCTGA GATGAGAAAG GAGGAAATGG CTAAGGAAAT GGATCCTGAG 
AAACTGAAGA TCCTGGAGTG GATAGAAGGC AAAGAGAGAA ACATCAGAGC CCTGCTTTCC 
ACAATGCACA CTGTGCTGTG GGCTGGGGAG ACCAAGTGGA AACCTGTGGG CATGGCAGAC 
CTGGTGACGC CAGAGCAAGT GAAGAAGGTG TACAGGAGAG CCGTGCTAGT GGTGCACCCC 
GACAAGGCTA CTGGGCAACC CTATGAACAA TATGCAAAGA TGATCTTCAT GGAGCTAAAT 
GATGCCTGGT CCGAATTTGA AAACCAAGGC CAAAAGCCCT TGTATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Impaired intracellular trafficking defines early Parkinson's disease.
Trends in neurosciences38(3)178-88(2015 Mar)
Hunn BH,Cragg SJ,Bolam JP,Spillantini MG,Wade-Martins R

Synaptojanin 1 mutation in Parkinson's disease brings further insight into the neuropathological mechanisms.
BioMed research international2014289728(2014)
Drouet V,Lesage S

Synaptic vesicle endocytosis.
Cold Spring Harbor perspectives in biology4(9)a005645(2012 Sep)
Saheki Y,De Camilli P

MiR-3120 is a mirror microRNA that targets heat shock cognate protein 70 and auxilin messenger RNAs and regulates clathrin vesicle uncoating.
The Journal of biological chemistry287(18)14726-33(2012 Apr)
Scott H,Howarth J,Lee YB,Wong LF,Bantounas I,Phylactou L,Verkade P,Uney JB

A sequential mechanism for clathrin cage disassembly by 70-kDa heat-shock cognate protein (Hsc70) and auxilin.
Proceedings of the National Academy of Sciences of the United States of America108(17)6927-32(2011 Apr)
Rothnie A,Clarke AR,Kuzmic P,Cameron A,Smith CJ

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Dnajc6 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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