Taf11 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Taf11
Entrez Gene ID	309638
Full Name	TATA-box binding protein associated factor 11
General protein information	Preferred Names TATA-box binding protein associated factor 11 Names transcription initiation factor TFIID subunit 11 TAF(II)28 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor TAFII-28 TAFII28 TATA box binding protein (TBP)-associated factor 11 TFIID subunit p30-beta transcription initiation factor TFIID 28 kDa subunit
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 20 Map Location: 20p12

mRNA and Protein(s)

mRNA	Protein	Name
XM_017601642.1	XP_017457131.1	transcription initiation factor TFIID subunit 11 isoform X2
XM_006256192.3	XP_006256254.1	transcription initiation factor TFIID subunit 11 isoform X1
XM_006256191.3	XP_006256253.1	transcription initiation factor TFIID subunit 11 isoform X1
XM_008772812.2	XP_008771034.1	transcription initiation factor TFIID subunit 11 isoform X1
NM_001008350.1	NP_001008351.1	transcription initiation factor TFIID subunit 11

Pathways from BioSystems

Homologies

Homo sapiens (human)	TAF11	NP_005634.1
Rattus norvegicus (Norway rat)	Taf11	NP_001008351.1
Xenopus tropicalis (tropical clawed frog)	taf11	NP_001120885.2
Pan troglodytes (chimpanzee)	TAF11	XP_518419.2
Canis lupus familiaris (dog)	TAF11	XP_005627302.1
Bos taurus (cattle)	TAF11	NP_001029448.1
Gallus gallus (chicken)	TAF11	NP_001231834.1
Drosophila melanogaster (fruit fly)	Taf11	NP_723484.1
Mus musculus (house mouse)	Taf11	NP_081112.1
Danio rerio (zebrafish)	taf11	NP_001002548.1
	TAF11	XP_001116577.1

Gene Ontology
Bibliography

Related articles in PubMed

Structural bioinformatics of the general transcription factor TFIID.
Malkowska M, Kokoszynska K, Rychlewski L, Wyrwicz L
Biochimie95(4)680-91(2013 Apr)

Dominant and redundant functions of TFIID involved in the regulation of hepatic genes.
Tatarakis A, Margaritis T, Martinez-Jimenez CP, Kouskouti A, Mohan WS 2nd, Haroniti A, Kafetzopoulos D, Tora L, Talianidis I
Molecular cell31(4)531-43(2008 Aug)

The TBN protein, which is essential for early embryonic mouse development, is an inducible TAFII implicated in adipogenesis.
Guermah M, Ge K, Chiang CM, Roeder RG
Molecular cell12(4)991-1001(2003 Oct)

The human transcription factor IID subunit human TATA-binding protein-associated factor 28 interacts in a ligand-reversible manner with the vitamin D(3) and thyroid hormone receptors.
Mengus G, Gangloff YG, Carr? L, Lavigne AC, Davidson I
The Journal of biological chemistry275(14)10064-71(2000 Apr)

Human TAF(II)28 interacts with the human T cell leukemia virus type I Tax transactivator and promotes its transcriptional activity.
Caron C, Mengus G, Dubrowskaya V, Roisin A, Davidson I, Jalinot P
Proceedings of the National Academy of Sciences of the United States of America94(8)3662-7(1997 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Taf11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Taf11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa11703	NM_001008350.1 Latest version!	Rattus norvegicus TATA-box binding protein associated factor 11 (Taf11), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00
ORa11703	XM_006256191.3 Latest version!	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00
ORa11703	XM_008772812.2 Latest version!	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00
ORa11703	XM_006256192.3 Latest version!	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00
ORa60095	XM_017601642.1 Latest version!	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Taf11 ( NM_001008350.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001008351.1 Rattus norvegicus TATA-box binding protein associated factor 11 (Taf11), mRNA.

Price & Availability↑

CloneID	ORa11703
Clone ID Related Accession (Same CDS sequence)	XM_006256192.3 , XM_006256191.3 , XM_008772812.2 , NM_001008350.1
Accession Version	NM_001008350.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-19
Organism	Rattus norvegicus(Norway rat)
Product	transcription initiation factor TFIID subunit 11
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC086421.1. On Dec 16, 2004 this sequence version replaced XM_228026.2. ##Evidence-Data-START## Transcript exon combination :: BC086421.1, CO382774.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001008351.1
CDS	80..715
Translation	MDNLGESPTDKAGEPGESEETRATPGAPVSADTEGIPEETDQVGDADSKEAAAEESELKSQDVSDVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQIPNSKHKKITFF

Target ORF information:

RefSeq Version	NM_001008350.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus TATA-box binding protein associated factor 11 (Taf11), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001008350.1

ORF Insert Sequence:

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Taf11 ( XM_006256192.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006256254.1 Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa11703
Clone ID Related Accession (Same CDS sequence)	XM_006256192.3 , XM_006256191.3 , XM_008772812.2 , NM_001008350.1
Accession Version	XM_006256192.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	transcription initiation factor TFIID subunit 11 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006256192.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006256254.1
CDS	710..1345
Translation	MDNLGESPTDKAGEPGESEETRATPGAPVSADTEGIPEETDQVGDADSKEAAAEESELKSQDVSDVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQIPNSKHKKITFF

Target ORF information:

RefSeq Version	XM_006256192.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006256192.3

ORF Insert Sequence:

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Taf11 ( XM_006256191.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006256253.1 Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa11703
Clone ID Related Accession (Same CDS sequence)	XM_006256192.3 , XM_006256191.3 , XM_008772812.2 , NM_001008350.1
Accession Version	XM_006256191.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	transcription initiation factor TFIID subunit 11 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006256191.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006256253.1
CDS	1166..1801
Translation	MDNLGESPTDKAGEPGESEETRATPGAPVSADTEGIPEETDQVGDADSKEAAAEESELKSQDVSDVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQIPNSKHKKITFF

Target ORF information:

RefSeq Version	XM_006256191.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006256191.3

ORF Insert Sequence:

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Taf11 ( XM_008772812.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008771034.1 Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa11703
Clone ID Related Accession (Same CDS sequence)	XM_006256192.3 , XM_006256191.3 , XM_008772812.2 , NM_001008350.1
Accession Version	XM_008772812.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 636bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	transcription initiation factor TFIID subunit 11 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008772812.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008771034.1
CDS	711..1346
Translation	MDNLGESPTDKAGEPGESEETRATPGAPVSADTEGIPEETDQVGDADSKEAAAEESELKSQDVSDVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQIPNSKHKKITFF

Target ORF information:

RefSeq Version	XM_008772812.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008772812.2

ORF Insert Sequence:

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCT GATCCAGTCC 
ATCACTGGCA CGTCTGTGTC CCAGAATGTT GTCATTGCCA TGTCTGGGAT CTCTAAAGTT 
TTTGTCGGGG AGGTGGTAGA GGAGGCCCTG GATGTGTGTG AGAAATGGGG AGAAATGCCA 
CCCCTGCAGC CCAAGCACAT GAGGGAGGCC GTCCGGAGGT TGAAGTCCAA GGGGCAAATC 
CCCAACTCAA AGCACAAGAA AATCACCTTC TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Taf11 ( XM_017601642.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017457131.1 Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ORa60095
Clone ID Related Accession (Same CDS sequence)	XM_017601642.1
Accession Version	XM_017601642.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 465bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	transcription initiation factor TFIID subunit 11 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCC CTGGATGTGT 
GTGAGAAATG GGGAGAAATG CCACCCCTGC AGCCCAAGCA CATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017457131.1
CDS	991..1455
Translation	MDNLGESPTDKAGEPGESEETRATPGAPVSADTEGIPEETDQVGDADSKEAAAEESELKSQDVSDVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRPWMCVRNGEKCHPCSPST

Target ORF information:

RefSeq Version	XM_017601642.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017601642.1

ORF Insert Sequence:

ATGGACAACC TTGGGGAGTC GCCCACGGAC AAAGCCGGGG AGCCAGGGGA GTCAGAGGAG 
ACGAGGGCTA CTCCTGGGGC CCCGGTGTCC GCCGACACTG AGGGAATCCC GGAGGAAACC 
GACCAGGTTG GAGACGCGGA CTCGAAAGAA GCCGCAGCGG AGGAAAGCGA GCTCAAGAGT 
CAGGATGTCT CAGACGTAAC AGCAGCTGAG AGGGAAGACC CATCTTTACT TACTCCTGCA 
GCCAAAAAGC TGAAATTAGA CACCAAGGAC AAGAAGGAGA AGAAGCAGAA GGTGGACGAA 
GACGAGATTC AGAAGATGCA AATCCTGGTC TCGTCTTTCT CTGAGGAGCA GCTGAACCGT 
TATGAAATGT ATCGCCGGTC AGCTTTCCCT AAGGCGGCCA TCAAGCGGCC CTGGATGTGT 
GTGAGAAATG GGGAGAAATG CCACCCCTGC AGCCCAAGCA CATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Structural bioinformatics of the general transcription factor TFIID.
Biochimie95(4)680-91(2013 Apr)
Malkowska M,Kokoszynska K,Rychlewski L,Wyrwicz L

Dominant and redundant functions of TFIID involved in the regulation of hepatic genes.
Molecular cell31(4)531-43(2008 Aug)
Tatarakis A,Margaritis T,Martinez-Jimenez CP,Kouskouti A,Mohan WS 2nd,Haroniti A,Kafetzopoulos D,Tora L,Talianidis I

The TBN protein, which is essential for early embryonic mouse development, is an inducible TAFII implicated in adipogenesis.
Molecular cell12(4)991-1001(2003 Oct)
Guermah M,Ge K,Chiang CM,Roeder RG

The human transcription factor IID subunit human TATA-binding protein-associated factor 28 interacts in a ligand-reversible manner with the vitamin D(3) and thyroid hormone receptors.
The Journal of biological chemistry275(14)10064-71(2000 Apr)
Mengus G,Gangloff YG,Carr? L,Lavigne AC,Davidson I

Human TAF(II)28 interacts with the human T cell leukemia virus type I Tax transactivator and promotes its transcriptional activity.
Proceedings of the National Academy of Sciences of the United States of America94(8)3662-7(1997 Apr)
Caron C,Mengus G,Dubrowskaya V,Roisin A,Davidson I,Jalinot P

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Taf11 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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