Ctnna1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ctnna1
Entrez Gene ID	307505
Full Name	catenin alpha 1
Synonyms	Catna1
General protein information	Preferred Names catenin alpha 1 Names catenin alpha-1 catenin (cadherin associated protein), alpha 1 catenin (cadherin-associated protein), alpha 1, 102kDa
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 18 Map Location: 18p11

mRNA and Protein(s)

mRNA	Protein	Name
NM_001007145.1	NP_001007146.1	catenin alpha-1
XM_008772037.2	XP_008770259.1	catenin alpha-1 isoform X2
XM_017600965.1	XP_017456454.1	catenin alpha-1 isoform X3
XM_017600964.1	XP_017456453.1	catenin alpha-1 isoform X1

Pathways from BioSystems

Homologies

	CTNNA1	XP_001113555.2
Gallus gallus (chicken)	CTNNA1	XP_414513.1
Homo sapiens (human)	CTNNA1	NP_001894.2
Mus musculus (house mouse)	Ctnna1	NP_033948.1
Xenopus tropicalis (tropical clawed frog)	ctnna1	XP_002932348.2
Pan troglodytes (chimpanzee)	CTNNA1	XP_001172013.1
Canis lupus familiaris (dog)	CTNNA1	XP_003431682.1
Bos taurus (cattle)	CTNNA1	NP_001030443.1
Rattus norvegicus (Norway rat)	Ctnna1	NP_001007146.1

Gene Ontology
Bibliography

Related articles in PubMed

Cadherin 26 is an alpha integrin-binding epithelial receptor regulated during allergic inflammation.
Caldwell JM, Collins MH, Kemme KA, Sherrill JD, Wen T, Rochman M, Stucke EM, Amin L, Tai H, Putnam PE, Jim?nez-Dalmaroni MJ, Wormald MR, Porollo A, Abonia JP, Rothenberg ME
Mucosal immunology10(5)1190-1201(2017 Sep)

Annexin-1 Mediates Microglial Activation and Migration via the CK2 Pathway during Oxygen-Glucose Deprivation/Reperfusion.
Liu S, Gao Y, Yu X, Zhao B, Liu L, Zhao Y, Luo Z, Shi J
International journal of molecular sciences17(10)(2016 Oct)

Alpha-Catulin Co-Localizes With Vimentin Intermediate Filaments and Functions in Pulmonary Vascular Endothelial Cell Migration via ROCK.
Bear MD, Liu T, Abualkhair S, Ghamloush MA, Hill NS, Preston I, Fanburg BL, Kayyali US, Toksoz D
Journal of cellular physiology231(4)934-43(2016 Apr)

E-cadherin interactome complexity and robustness resolved by quantitative proteomics.
Guo Z, Neilson LJ, Zhong H, Murray PS, Zanivan S, Zaidel-Bar R
Science signaling7(354)rs7(2014 Dec)

Loss of ?(E)-catenin potentiates cisplatin-induced nephrotoxicity via increasing apoptosis in renal tubular epithelial cells.
Wang X, Grunz-Borgmann EA, Parrish AR
Toxicological sciences : an official journal of the Society of Toxicology141(1)254-62(2014 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

ANXA1 promotes microglial activation and migration during oxygen-glucose deprivation/reperfusion via FPR, and CK2 target alpha-E-catenin phosphorylation is involved in this process.
Title: Annexin-1 Mediates Microglial Activation and Migration via the CK2 Pathway during Oxygen-Glucose Deprivation/Reperfusion.

alpha-catulin has a unique function in co-localization with vimentin filaments that contributes to vascular endothelial cells migration via a pathway that may involve ROCK signaling.
Title: Alpha-Catulin Co-Localizes With Vimentin Intermediate Filaments and Functions in Pulmonary Vascular Endothelial Cell Migration via ROCK.

Taken together, these data suggest that loss of alpha(E)-catenin increases apoptosis of tubular epithelial cells which may contribute to the increased nephrotoxicity induced by cisplatin in aged kidney.
Title: Loss of ?(E)-catenin potentiates cisplatin-induced nephrotoxicity via increasing apoptosis in renal tubular epithelial cells.

expression of E-cadherin and alpha-catenin was significantly associated with the ROS and degenerative changes in the seminiferous tubules.
Title: Expression of E-cadherin and ?-catenin in a varicocele-induced infertility rat model.

Results provide marker proteins Gap-43 and newly identified candidate neuronal growth-associated proteins MAP1B, CRMP5, crmp5 and catenins.
Title: Identification of functional marker proteins in the mammalian growth cone.

The following Ctnna1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ctnna1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa11036	NM_001007145.1 Latest version!	Rattus norvegicus catenin alpha 1 (Ctnna1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$475.30 $679.00
ORa11036	XM_017600964.1 Latest version!	Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$475.30 $679.00
ORa46509	XM_008772037.2 Latest version!	Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$307.30 $439.00
ORa59274	XM_017600965.1 Latest version!	Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	10-12	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ctnna1 ( NM_001007145.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001007146.1 Rattus norvegicus catenin alpha 1 (Ctnna1), mRNA.

Price & Availability↑

CloneID	ORa11036
Clone ID Related Accession (Same CDS sequence)	NM_001007145.1 , XM_017600964.1
Accession Version	NM_001007145.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2727bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-18
Organism	Rattus norvegicus(Norway rat)
Product	catenin alpha-1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085789.1. On Nov 22, 2004 this sequence version replaced XM_226048.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC085789.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGACTGCCG TCCACACAGG CAACATAAAC TTCAAATGGG ACCCCAAAAG TCTAGAGATT 
AGAACTCTGG CTGTTGAAAG ACTGTTGGAG CCTCTTGTTA CACAGGTGAC AACCCTGGTA 
AACACCAATA GTAAAGGACC CTCTAATAAA AAGAGAGGCC GTTCTAAGAA GGCCCATGTT 
TTGGCTGCAT CTGTTGAACA AGCAACTGAG AATTTCTTGG AAAAGGGGGA CAAAATAGCA 
AAAGAGAGTC AGTTTCTTAA GGAGGAGCTT GTGGCTGCTG TGGACGATGT TCGAAAACAA 
GGAGATCTGA TGAAGAGCGC TGCTGGGGAG TTTGCAGATG ATCCGTGCTC TTCTGTGAAG 
CGAGGTAACA TGGTTCGGGC AGCTCGAGCT CTGCTTTCCG CCGTTACCCG GCTGCTGATT 
CTGGCTGACA TGGCAGATGT CTACAAGTTA CTTGTTCAGC TGAAAGTTGT GGAAGACGGC 
ATATTGAAGC TGAGGAATGC TGGCAACGAG CAGGATCTAG GGATACAGTA CAGAGCTCTG 
AAACCAGAAG TAGATAAGCT GAACATCATG GCAGCAAAAC GACAACAGGA ACTGAAAGAT 
GTGGGCCATC GTGATCAAAT GGCTGCAGCT AGAGGAATCC TGCAGAAAAA TGTTCCCATC 
CTCTACACTG CATCCCAGGC ATGCCTGCAG CACCCCGATG TAGCAGCCTA CAAGGCCAAC 
CGGGACTTGA TATACAAGCA GCTGCAGCAG GCCGTCACGG GGATCTCTAA TGCTGCCCAG 
GCTACTGCAT CAGATGACGC CTCCCAGCAG CAGGGTGGCG GCGGCGGCGG GGGAGAGCTG 
GCGTATGCTC TCAACAACTT TGATAAACAA ATCATTGTGG ACCCCTTGAG CTTCAGCGAG 
GAACGCTTTA GACCTTCACT GGAAGAACGC CTGGAAAGCA TAATTAGCGG AGCTGCCCTG 
ATGGCCGACT CATCCTGCAC ACGTGATGAC CGGCGTGAGC GCATTGTGGC AGAGTGTAAT 
GCTGTCCGCC AGGCTCTACA GGACCTGCTA TCAGAATACA TGGGCAATGC TGGACGCAAG 
GAGAGGAGCG ACGCACTCAA CTCTGCCATA GATAAAATGA CCAAGAAGAC CAGGGACCTG 
CGTCGACAGC TTCGCAAAGC TGTCATGGAC CACGTATCAG ATTCCTTCCT GGAGACCAAT 
GTCCCTCTTT TAGTACTGAT TGAAGCTGCA AAGAATGGAA ACGAGAAGGA GGTTAAGGAG 
TATGCCCAGG TTTTTCGTGA ACACGCCAAC AAACTGATTG AGGTCGCCAA CTTGGCCTGT 
TCAATCTCCA ATAATGAAGA AGGCGTGAAG CTCGTTCGGA TGTCTGCAAG TCAGTTAGAA 
GCGCTCTGTC CTCAGGTTAT CAATGCTGCG TTGGCTTTAG CGGCAAAGCC ACAGAGTAAA 
CTGGCCCAAG AGAACATGGA TCTTTTTAAA GAGCAGTGGG AAAAACAAGT CCGTGTTCTC 
ACAGATGCTG TTGATGACAT TACTTCCATT GATGACTTCT TGGCTGTCTC AGAGAACCAC 
ATTTTGGAAG ATGTGAACAA GTGTGTTATC GCTCTCCAAG AGAAAGACGT GGATGGGCTG 
GATCGCACTG CTGGGGCCAT TCGAGGCCGG GCAGCCCGAG TCATTCATGT CGTCACCTCA 
GAGATGGACA ACTACGAGCC AGGAGTTTAC ACAGAAAAGG TTCTAGAAGC CACCAAACTC 
CTCTCCAACA CAGTCATGCC GCGTTTCACT GAGCAAGTGG AAGCAGCTGT GGAAGCCCTC 
AGCTCAGACC CCGCCCAGCC TATGGATGAG AATGAGTTCA TCGACGCCTC CCGTCTGGTA 
TACGACGGCA TCCGGGACAT CCGCAAGGCC GTGCTGATGA TAAGGACCCC CGAGGAGTTG 
GACGACTCTG ACTTCGAGAC TGAAGACTTT GATGTCAGAA GCAGGACCAG TGTCCAGACA 
GAAGATGACC AGCTGATAGC TGGACAGAGC GCCCGGGCGA TCATGGCTCA GCTTCCTCAG 
GAGCAGAAGG CAAAGATCGC AGAGCAGGTG GCCAGCTTCC AGGAGGAGAA GAGCAAGCTG 
GACGCTGAGG TGTCCAAGTG GGACGACAGC GGCAATGACA TCATTGTGCT GGCCAAGCAG 
ATGTGCATGA TCATGATGGA GATGACCGAC TTCACCCGAG GCAAAGGGCC ACTCAAAAAC 
ACATCGGATG TGATCAGTGC TGCCAAGAAA ATTGCTGAGG CAGGATCCAG GATGGATAAG 
CTTGGCCGGA CCATCGCAGA CCACTGCCCA GACTCCGCCT GCAAGCAGGA CCTGCTGGCC 
TACCTTCAGC GCATCGCGCT CTACTGCCAC CAGCTCAACA TCTGCAGCAA GGTCAAGGCT 
GAAGTACAGA ACCTCGGTGG AGAGCTTGTC GTCTCTGGGG TGGACAGCGC CATGTCCCTG 
ATCCAGGCAG CCAAGAACTT GATGAACGCT GTAGTGCAGA CAGTGAAGGC GTCCTACGTG 
GCTTCCACCA AATACCAGAA GTCACAGGGG ATGGCGTCCC TCAACCTTCC TGCTGTGTCA 
TGGAAAATGA AAGCCCCCGA GAAGAAGCCC TTGGTGAAGA GAGAGAAGCA GGATGAGACA 
CAGACCAAGA TCAAGCGGGC CTCCCAGAAG AAGCACGTGA ACCCTGTGCA GGCCCTCAGC 
GAGTTCAAGG CCATGGACAG CATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001007146.1
CDS	69..2795
Translation	MTAVHTGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVDDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYRALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDASQQQGGGGGGGELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI

Target ORF information:

RefSeq Version	NM_001007145.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus catenin alpha 1 (Ctnna1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001007145.1

ORF Insert Sequence:

ATGACTGCCG TCCACACAGG CAACATAAAC TTCAAATGGG ACCCCAAAAG TCTAGAGATT 
AGAACTCTGG CTGTTGAAAG ACTGTTGGAG CCTCTTGTTA CACAGGTGAC AACCCTGGTA 
AACACCAATA GTAAAGGACC CTCTAATAAA AAGAGAGGCC GTTCTAAGAA GGCCCATGTT 
TTGGCTGCAT CTGTTGAACA AGCAACTGAG AATTTCTTGG AAAAGGGGGA CAAAATAGCA 
AAAGAGAGTC AGTTTCTTAA GGAGGAGCTT GTGGCTGCTG TGGACGATGT TCGAAAACAA 
GGAGATCTGA TGAAGAGCGC TGCTGGGGAG TTTGCAGATG ATCCGTGCTC TTCTGTGAAG 
CGAGGTAACA TGGTTCGGGC AGCTCGAGCT CTGCTTTCCG CCGTTACCCG GCTGCTGATT 
CTGGCTGACA TGGCAGATGT CTACAAGTTA CTTGTTCAGC TGAAAGTTGT GGAAGACGGC 
ATATTGAAGC TGAGGAATGC TGGCAACGAG CAGGATCTAG GGATACAGTA CAGAGCTCTG 
AAACCAGAAG TAGATAAGCT GAACATCATG GCAGCAAAAC GACAACAGGA ACTGAAAGAT 
GTGGGCCATC GTGATCAAAT GGCTGCAGCT AGAGGAATCC TGCAGAAAAA TGTTCCCATC 
CTCTACACTG CATCCCAGGC ATGCCTGCAG CACCCCGATG TAGCAGCCTA CAAGGCCAAC 
CGGGACTTGA TATACAAGCA GCTGCAGCAG GCCGTCACGG GGATCTCTAA TGCTGCCCAG 
GCTACTGCAT CAGATGACGC CTCCCAGCAG CAGGGTGGCG GCGGCGGCGG GGGAGAGCTG 
GCGTATGCTC TCAACAACTT TGATAAACAA ATCATTGTGG ACCCCTTGAG CTTCAGCGAG 
GAACGCTTTA GACCTTCACT GGAAGAACGC CTGGAAAGCA TAATTAGCGG AGCTGCCCTG 
ATGGCCGACT CATCCTGCAC ACGTGATGAC CGGCGTGAGC GCATTGTGGC AGAGTGTAAT 
GCTGTCCGCC AGGCTCTACA GGACCTGCTA TCAGAATACA TGGGCAATGC TGGACGCAAG 
GAGAGGAGCG ACGCACTCAA CTCTGCCATA GATAAAATGA CCAAGAAGAC CAGGGACCTG 
CGTCGACAGC TTCGCAAAGC TGTCATGGAC CACGTATCAG ATTCCTTCCT GGAGACCAAT 
GTCCCTCTTT TAGTACTGAT TGAAGCTGCA AAGAATGGAA ACGAGAAGGA GGTTAAGGAG 
TATGCCCAGG TTTTTCGTGA ACACGCCAAC AAACTGATTG AGGTCGCCAA CTTGGCCTGT 
TCAATCTCCA ATAATGAAGA AGGCGTGAAG CTCGTTCGGA TGTCTGCAAG TCAGTTAGAA 
GCGCTCTGTC CTCAGGTTAT CAATGCTGCG TTGGCTTTAG CGGCAAAGCC ACAGAGTAAA 
CTGGCCCAAG AGAACATGGA TCTTTTTAAA GAGCAGTGGG AAAAACAAGT CCGTGTTCTC 
ACAGATGCTG TTGATGACAT TACTTCCATT GATGACTTCT TGGCTGTCTC AGAGAACCAC 
ATTTTGGAAG ATGTGAACAA GTGTGTTATC GCTCTCCAAG AGAAAGACGT GGATGGGCTG 
GATCGCACTG CTGGGGCCAT TCGAGGCCGG GCAGCCCGAG TCATTCATGT CGTCACCTCA 
GAGATGGACA ACTACGAGCC AGGAGTTTAC ACAGAAAAGG TTCTAGAAGC CACCAAACTC 
CTCTCCAACA CAGTCATGCC GCGTTTCACT GAGCAAGTGG AAGCAGCTGT GGAAGCCCTC 
AGCTCAGACC CCGCCCAGCC TATGGATGAG AATGAGTTCA TCGACGCCTC CCGTCTGGTA 
TACGACGGCA TCCGGGACAT CCGCAAGGCC GTGCTGATGA TAAGGACCCC CGAGGAGTTG 
GACGACTCTG ACTTCGAGAC TGAAGACTTT GATGTCAGAA GCAGGACCAG TGTCCAGACA 
GAAGATGACC AGCTGATAGC TGGACAGAGC GCCCGGGCGA TCATGGCTCA GCTTCCTCAG 
GAGCAGAAGG CAAAGATCGC AGAGCAGGTG GCCAGCTTCC AGGAGGAGAA GAGCAAGCTG 
GACGCTGAGG TGTCCAAGTG GGACGACAGC GGCAATGACA TCATTGTGCT GGCCAAGCAG 
ATGTGCATGA TCATGATGGA GATGACCGAC TTCACCCGAG GCAAAGGGCC ACTCAAAAAC 
ACATCGGATG TGATCAGTGC TGCCAAGAAA ATTGCTGAGG CAGGATCCAG GATGGATAAG 
CTTGGCCGGA CCATCGCAGA CCACTGCCCA GACTCCGCCT GCAAGCAGGA CCTGCTGGCC 
TACCTTCAGC GCATCGCGCT CTACTGCCAC CAGCTCAACA TCTGCAGCAA GGTCAAGGCT 
GAAGTACAGA ACCTCGGTGG AGAGCTTGTC GTCTCTGGGG TGGACAGCGC CATGTCCCTG 
ATCCAGGCAG CCAAGAACTT GATGAACGCT GTAGTGCAGA CAGTGAAGGC GTCCTACGTG 
GCTTCCACCA AATACCAGAA GTCACAGGGG ATGGCGTCCC TCAACCTTCC TGCTGTGTCA 
TGGAAAATGA AAGCCCCCGA GAAGAAGCCC TTGGTGAAGA GAGAGAAGCA GGATGAGACA 
CAGACCAAGA TCAAGCGGGC CTCCCAGAAG AAGCACGTGA ACCCTGTGCA GGCCCTCAGC 
GAGTTCAAGG CCATGGACAG CATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ctnna1 ( XM_017600964.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017456453.1 Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa11036
Clone ID Related Accession (Same CDS sequence)	NM_001007145.1 , XM_017600964.1
Accession Version	XM_017600964.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2727bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	catenin alpha-1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACTGCCG TCCACACAGG CAACATAAAC TTCAAATGGG ACCCCAAAAG TCTAGAGATT 
AGAACTCTGG CTGTTGAAAG ACTGTTGGAG CCTCTTGTTA CACAGGTGAC AACCCTGGTA 
AACACCAATA GTAAAGGACC CTCTAATAAA AAGAGAGGCC GTTCTAAGAA GGCCCATGTT 
TTGGCTGCAT CTGTTGAACA AGCAACTGAG AATTTCTTGG AAAAGGGGGA CAAAATAGCA 
AAAGAGAGTC AGTTTCTTAA GGAGGAGCTT GTGGCTGCTG TGGACGATGT TCGAAAACAA 
GGAGATCTGA TGAAGAGCGC TGCTGGGGAG TTTGCAGATG ATCCGTGCTC TTCTGTGAAG 
CGAGGTAACA TGGTTCGGGC AGCTCGAGCT CTGCTTTCCG CCGTTACCCG GCTGCTGATT 
CTGGCTGACA TGGCAGATGT CTACAAGTTA CTTGTTCAGC TGAAAGTTGT GGAAGACGGC 
ATATTGAAGC TGAGGAATGC TGGCAACGAG CAGGATCTAG GGATACAGTA CAGAGCTCTG 
AAACCAGAAG TAGATAAGCT GAACATCATG GCAGCAAAAC GACAACAGGA ACTGAAAGAT 
GTGGGCCATC GTGATCAAAT GGCTGCAGCT AGAGGAATCC TGCAGAAAAA TGTTCCCATC 
CTCTACACTG CATCCCAGGC ATGCCTGCAG CACCCCGATG TAGCAGCCTA CAAGGCCAAC 
CGGGACTTGA TATACAAGCA GCTGCAGCAG GCCGTCACGG GGATCTCTAA TGCTGCCCAG 
GCTACTGCAT CAGATGACGC CTCCCAGCAG CAGGGTGGCG GCGGCGGCGG GGGAGAGCTG 
GCGTATGCTC TCAACAACTT TGATAAACAA ATCATTGTGG ACCCCTTGAG CTTCAGCGAG 
GAACGCTTTA GACCTTCACT GGAAGAACGC CTGGAAAGCA TAATTAGCGG AGCTGCCCTG 
ATGGCCGACT CATCCTGCAC ACGTGATGAC CGGCGTGAGC GCATTGTGGC AGAGTGTAAT 
GCTGTCCGCC AGGCTCTACA GGACCTGCTA TCAGAATACA TGGGCAATGC TGGACGCAAG 
GAGAGGAGCG ACGCACTCAA CTCTGCCATA GATAAAATGA CCAAGAAGAC CAGGGACCTG 
CGTCGACAGC TTCGCAAAGC TGTCATGGAC CACGTATCAG ATTCCTTCCT GGAGACCAAT 
GTCCCTCTTT TAGTACTGAT TGAAGCTGCA AAGAATGGAA ACGAGAAGGA GGTTAAGGAG 
TATGCCCAGG TTTTTCGTGA ACACGCCAAC AAACTGATTG AGGTCGCCAA CTTGGCCTGT 
TCAATCTCCA ATAATGAAGA AGGCGTGAAG CTCGTTCGGA TGTCTGCAAG TCAGTTAGAA 
GCGCTCTGTC CTCAGGTTAT CAATGCTGCG TTGGCTTTAG CGGCAAAGCC ACAGAGTAAA 
CTGGCCCAAG AGAACATGGA TCTTTTTAAA GAGCAGTGGG AAAAACAAGT CCGTGTTCTC 
ACAGATGCTG TTGATGACAT TACTTCCATT GATGACTTCT TGGCTGTCTC AGAGAACCAC 
ATTTTGGAAG ATGTGAACAA GTGTGTTATC GCTCTCCAAG AGAAAGACGT GGATGGGCTG 
GATCGCACTG CTGGGGCCAT TCGAGGCCGG GCAGCCCGAG TCATTCATGT CGTCACCTCA 
GAGATGGACA ACTACGAGCC AGGAGTTTAC ACAGAAAAGG TTCTAGAAGC CACCAAACTC 
CTCTCCAACA CAGTCATGCC GCGTTTCACT GAGCAAGTGG AAGCAGCTGT GGAAGCCCTC 
AGCTCAGACC CCGCCCAGCC TATGGATGAG AATGAGTTCA TCGACGCCTC CCGTCTGGTA 
TACGACGGCA TCCGGGACAT CCGCAAGGCC GTGCTGATGA TAAGGACCCC CGAGGAGTTG 
GACGACTCTG ACTTCGAGAC TGAAGACTTT GATGTCAGAA GCAGGACCAG TGTCCAGACA 
GAAGATGACC AGCTGATAGC TGGACAGAGC GCCCGGGCGA TCATGGCTCA GCTTCCTCAG 
GAGCAGAAGG CAAAGATCGC AGAGCAGGTG GCCAGCTTCC AGGAGGAGAA GAGCAAGCTG 
GACGCTGAGG TGTCCAAGTG GGACGACAGC GGCAATGACA TCATTGTGCT GGCCAAGCAG 
ATGTGCATGA TCATGATGGA GATGACCGAC TTCACCCGAG GCAAAGGGCC ACTCAAAAAC 
ACATCGGATG TGATCAGTGC TGCCAAGAAA ATTGCTGAGG CAGGATCCAG GATGGATAAG 
CTTGGCCGGA CCATCGCAGA CCACTGCCCA GACTCCGCCT GCAAGCAGGA CCTGCTGGCC 
TACCTTCAGC GCATCGCGCT CTACTGCCAC CAGCTCAACA TCTGCAGCAA GGTCAAGGCT 
GAAGTACAGA ACCTCGGTGG AGAGCTTGTC GTCTCTGGGG TGGACAGCGC CATGTCCCTG 
ATCCAGGCAG CCAAGAACTT GATGAACGCT GTAGTGCAGA CAGTGAAGGC GTCCTACGTG 
GCTTCCACCA AATACCAGAA GTCACAGGGG ATGGCGTCCC TCAACCTTCC TGCTGTGTCA 
TGGAAAATGA AAGCCCCCGA GAAGAAGCCC TTGGTGAAGA GAGAGAAGCA GGATGAGACA 
CAGACCAAGA TCAAGCGGGC CTCCCAGAAG AAGCACGTGA ACCCTGTGCA GGCCCTCAGC 
GAGTTCAAGG CCATGGACAG CATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017456453.1
CDS	210..2936
Translation	MTAVHTGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVDDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYRALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDASQQQGGGGGGGELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI

Target ORF information:

RefSeq Version	XM_017600964.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017600964.1

ORF Insert Sequence:

ATGACTGCCG TCCACACAGG CAACATAAAC TTCAAATGGG ACCCCAAAAG TCTAGAGATT 
AGAACTCTGG CTGTTGAAAG ACTGTTGGAG CCTCTTGTTA CACAGGTGAC AACCCTGGTA 
AACACCAATA GTAAAGGACC CTCTAATAAA AAGAGAGGCC GTTCTAAGAA GGCCCATGTT 
TTGGCTGCAT CTGTTGAACA AGCAACTGAG AATTTCTTGG AAAAGGGGGA CAAAATAGCA 
AAAGAGAGTC AGTTTCTTAA GGAGGAGCTT GTGGCTGCTG TGGACGATGT TCGAAAACAA 
GGAGATCTGA TGAAGAGCGC TGCTGGGGAG TTTGCAGATG ATCCGTGCTC TTCTGTGAAG 
CGAGGTAACA TGGTTCGGGC AGCTCGAGCT CTGCTTTCCG CCGTTACCCG GCTGCTGATT 
CTGGCTGACA TGGCAGATGT CTACAAGTTA CTTGTTCAGC TGAAAGTTGT GGAAGACGGC 
ATATTGAAGC TGAGGAATGC TGGCAACGAG CAGGATCTAG GGATACAGTA CAGAGCTCTG 
AAACCAGAAG TAGATAAGCT GAACATCATG GCAGCAAAAC GACAACAGGA ACTGAAAGAT 
GTGGGCCATC GTGATCAAAT GGCTGCAGCT AGAGGAATCC TGCAGAAAAA TGTTCCCATC 
CTCTACACTG CATCCCAGGC ATGCCTGCAG CACCCCGATG TAGCAGCCTA CAAGGCCAAC 
CGGGACTTGA TATACAAGCA GCTGCAGCAG GCCGTCACGG GGATCTCTAA TGCTGCCCAG 
GCTACTGCAT CAGATGACGC CTCCCAGCAG CAGGGTGGCG GCGGCGGCGG GGGAGAGCTG 
GCGTATGCTC TCAACAACTT TGATAAACAA ATCATTGTGG ACCCCTTGAG CTTCAGCGAG 
GAACGCTTTA GACCTTCACT GGAAGAACGC CTGGAAAGCA TAATTAGCGG AGCTGCCCTG 
ATGGCCGACT CATCCTGCAC ACGTGATGAC CGGCGTGAGC GCATTGTGGC AGAGTGTAAT 
GCTGTCCGCC AGGCTCTACA GGACCTGCTA TCAGAATACA TGGGCAATGC TGGACGCAAG 
GAGAGGAGCG ACGCACTCAA CTCTGCCATA GATAAAATGA CCAAGAAGAC CAGGGACCTG 
CGTCGACAGC TTCGCAAAGC TGTCATGGAC CACGTATCAG ATTCCTTCCT GGAGACCAAT 
GTCCCTCTTT TAGTACTGAT TGAAGCTGCA AAGAATGGAA ACGAGAAGGA GGTTAAGGAG 
TATGCCCAGG TTTTTCGTGA ACACGCCAAC AAACTGATTG AGGTCGCCAA CTTGGCCTGT 
TCAATCTCCA ATAATGAAGA AGGCGTGAAG CTCGTTCGGA TGTCTGCAAG TCAGTTAGAA 
GCGCTCTGTC CTCAGGTTAT CAATGCTGCG TTGGCTTTAG CGGCAAAGCC ACAGAGTAAA 
CTGGCCCAAG AGAACATGGA TCTTTTTAAA GAGCAGTGGG AAAAACAAGT CCGTGTTCTC 
ACAGATGCTG TTGATGACAT TACTTCCATT GATGACTTCT TGGCTGTCTC AGAGAACCAC 
ATTTTGGAAG ATGTGAACAA GTGTGTTATC GCTCTCCAAG AGAAAGACGT GGATGGGCTG 
GATCGCACTG CTGGGGCCAT TCGAGGCCGG GCAGCCCGAG TCATTCATGT CGTCACCTCA 
GAGATGGACA ACTACGAGCC AGGAGTTTAC ACAGAAAAGG TTCTAGAAGC CACCAAACTC 
CTCTCCAACA CAGTCATGCC GCGTTTCACT GAGCAAGTGG AAGCAGCTGT GGAAGCCCTC 
AGCTCAGACC CCGCCCAGCC TATGGATGAG AATGAGTTCA TCGACGCCTC CCGTCTGGTA 
TACGACGGCA TCCGGGACAT CCGCAAGGCC GTGCTGATGA TAAGGACCCC CGAGGAGTTG 
GACGACTCTG ACTTCGAGAC TGAAGACTTT GATGTCAGAA GCAGGACCAG TGTCCAGACA 
GAAGATGACC AGCTGATAGC TGGACAGAGC GCCCGGGCGA TCATGGCTCA GCTTCCTCAG 
GAGCAGAAGG CAAAGATCGC AGAGCAGGTG GCCAGCTTCC AGGAGGAGAA GAGCAAGCTG 
GACGCTGAGG TGTCCAAGTG GGACGACAGC GGCAATGACA TCATTGTGCT GGCCAAGCAG 
ATGTGCATGA TCATGATGGA GATGACCGAC TTCACCCGAG GCAAAGGGCC ACTCAAAAAC 
ACATCGGATG TGATCAGTGC TGCCAAGAAA ATTGCTGAGG CAGGATCCAG GATGGATAAG 
CTTGGCCGGA CCATCGCAGA CCACTGCCCA GACTCCGCCT GCAAGCAGGA CCTGCTGGCC 
TACCTTCAGC GCATCGCGCT CTACTGCCAC CAGCTCAACA TCTGCAGCAA GGTCAAGGCT 
GAAGTACAGA ACCTCGGTGG AGAGCTTGTC GTCTCTGGGG TGGACAGCGC CATGTCCCTG 
ATCCAGGCAG CCAAGAACTT GATGAACGCT GTAGTGCAGA CAGTGAAGGC GTCCTACGTG 
GCTTCCACCA AATACCAGAA GTCACAGGGG ATGGCGTCCC TCAACCTTCC TGCTGTGTCA 
TGGAAAATGA AAGCCCCCGA GAAGAAGCCC TTGGTGAAGA GAGAGAAGCA GGATGAGACA 
CAGACCAAGA TCAAGCGGGC CTCCCAGAAG AAGCACGTGA ACCCTGTGCA GGCCCTCAGC 
GAGTTCAAGG CCATGGACAG CATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ctnna1 ( XM_008772037.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008770259.1 Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X2, mRNA.

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CloneID	ORa46509
Clone ID Related Accession (Same CDS sequence)	XM_008772037.2
Accession Version	XM_008772037.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1611bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	catenin alpha-1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008772037.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACCAAGA AGACCAGGGA CCTGCGTCGA CAGCTTCGCA AAGCTGTCAT GGACCACGTA 
TCAGATTCCT TCCTGGAGAC CAATGTCCCT CTTTTAGTAC TGATTGAAGC TGCAAAGAAT 
GGAAACGAGA AGGAGGTTAA GGAGTATGCC CAGGTTTTTC GTGAACACGC CAACAAACTG 
ATTGAGGTCG CCAACTTGGC CTGTTCAATC TCCAATAATG AAGAAGGCGT GAAGCTCGTT 
CGGATGTCTG CAAGTCAGTT AGAAGCGCTC TGTCCTCAGG TTATCAATGC TGCGTTGGCT 
TTAGCGGCAA AGCCACAGAG TAAACTGGCC CAAGAGAACA TGGATCTTTT TAAAGAGCAG 
TGGGAAAAAC AAGTCCGTGT TCTCACAGAT GCTGTTGATG ACATTACTTC CATTGATGAC 
TTCTTGGCTG TCTCAGAGAA CCACATTTTG GAAGATGTGA ACAAGTGTGT TATCGCTCTC 
CAAGAGAAAG ACGTGGATGG GCTGGATCGC ACTGCTGGGG CCATTCGAGG CCGGGCAGCC 
CGAGTCATTC ATGTCGTCAC CTCAGAGATG GACAACTACG AGCCAGGAGT TTACACAGAA 
AAGGTTCTAG AAGCCACCAA ACTCCTCTCC AACACAGTCA TGCCGCGTTT CACTGAGCAA 
GTGGAAGCAG CTGTGGAAGC CCTCAGCTCA GACCCCGCCC AGCCTATGGA TGAGAATGAG 
TTCATCGACG CCTCCCGTCT GGTATACGAC GGCATCCGGG ACATCCGCAA GGCCGTGCTG 
ATGATAAGGA CCCCCGAGGA GTTGGACGAC TCTGACTTCG AGACTGAAGA CTTTGATGTC 
AGAAGCAGGA CCAGTGTCCA GACAGAAGAT GACCAGCTGA TAGCTGGACA GAGCGCCCGG 
GCGATCATGG CTCAGCTTCC TCAGGAGCAG AAGGCAAAGA TCGCAGAGCA GGTGGCCAGC 
TTCCAGGAGG AGAAGAGCAA GCTGGACGCT GAGGTGTCCA AGTGGGACGA CAGCGGCAAT 
GACATCATTG TGCTGGCCAA GCAGATGTGC ATGATCATGA TGGAGATGAC CGACTTCACC 
CGAGGCAAAG GGCCACTCAA AAACACATCG GATGTGATCA GTGCTGCCAA GAAAATTGCT 
GAGGCAGGAT CCAGGATGGA TAAGCTTGGC CGGACCATCG CAGACCACTG CCCAGACTCC 
GCCTGCAAGC AGGACCTGCT GGCCTACCTT CAGCGCATCG CGCTCTACTG CCACCAGCTC 
AACATCTGCA GCAAGGTCAA GGCTGAAGTA CAGAACCTCG GTGGAGAGCT TGTCGTCTCT 
GGGGTGGACA GCGCCATGTC CCTGATCCAG GCAGCCAAGA ACTTGATGAA CGCTGTAGTG 
CAGACAGTGA AGGCGTCCTA CGTGGCTTCC ACCAAATACC AGAAGTCACA GGGGATGGCG 
TCCCTCAACC TTCCTGCTGT GTCATGGAAA ATGAAAGCCC CCGAGAAGAA GCCCTTGGTG 
AAGAGAGAGA AGCAGGATGA GACACAGACC AAGATCAAGC GGGCCTCCCA GAAGAAGCAC 
GTGAACCCTG TGCAGGCCCT CAGCGAGTTC AAGGCCATGG ACAGCATCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008770259.1
CDS	138..1748
Translation	MTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI

Target ORF information:

RefSeq Version	XM_008772037.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008772037.2

ORF Insert Sequence:

ATGACCAAGA AGACCAGGGA CCTGCGTCGA CAGCTTCGCA AAGCTGTCAT GGACCACGTA 
TCAGATTCCT TCCTGGAGAC CAATGTCCCT CTTTTAGTAC TGATTGAAGC TGCAAAGAAT 
GGAAACGAGA AGGAGGTTAA GGAGTATGCC CAGGTTTTTC GTGAACACGC CAACAAACTG 
ATTGAGGTCG CCAACTTGGC CTGTTCAATC TCCAATAATG AAGAAGGCGT GAAGCTCGTT 
CGGATGTCTG CAAGTCAGTT AGAAGCGCTC TGTCCTCAGG TTATCAATGC TGCGTTGGCT 
TTAGCGGCAA AGCCACAGAG TAAACTGGCC CAAGAGAACA TGGATCTTTT TAAAGAGCAG 
TGGGAAAAAC AAGTCCGTGT TCTCACAGAT GCTGTTGATG ACATTACTTC CATTGATGAC 
TTCTTGGCTG TCTCAGAGAA CCACATTTTG GAAGATGTGA ACAAGTGTGT TATCGCTCTC 
CAAGAGAAAG ACGTGGATGG GCTGGATCGC ACTGCTGGGG CCATTCGAGG CCGGGCAGCC 
CGAGTCATTC ATGTCGTCAC CTCAGAGATG GACAACTACG AGCCAGGAGT TTACACAGAA 
AAGGTTCTAG AAGCCACCAA ACTCCTCTCC AACACAGTCA TGCCGCGTTT CACTGAGCAA 
GTGGAAGCAG CTGTGGAAGC CCTCAGCTCA GACCCCGCCC AGCCTATGGA TGAGAATGAG 
TTCATCGACG CCTCCCGTCT GGTATACGAC GGCATCCGGG ACATCCGCAA GGCCGTGCTG 
ATGATAAGGA CCCCCGAGGA GTTGGACGAC TCTGACTTCG AGACTGAAGA CTTTGATGTC 
AGAAGCAGGA CCAGTGTCCA GACAGAAGAT GACCAGCTGA TAGCTGGACA GAGCGCCCGG 
GCGATCATGG CTCAGCTTCC TCAGGAGCAG AAGGCAAAGA TCGCAGAGCA GGTGGCCAGC 
TTCCAGGAGG AGAAGAGCAA GCTGGACGCT GAGGTGTCCA AGTGGGACGA CAGCGGCAAT 
GACATCATTG TGCTGGCCAA GCAGATGTGC ATGATCATGA TGGAGATGAC CGACTTCACC 
CGAGGCAAAG GGCCACTCAA AAACACATCG GATGTGATCA GTGCTGCCAA GAAAATTGCT 
GAGGCAGGAT CCAGGATGGA TAAGCTTGGC CGGACCATCG CAGACCACTG CCCAGACTCC 
GCCTGCAAGC AGGACCTGCT GGCCTACCTT CAGCGCATCG CGCTCTACTG CCACCAGCTC 
AACATCTGCA GCAAGGTCAA GGCTGAAGTA CAGAACCTCG GTGGAGAGCT TGTCGTCTCT 
GGGGTGGACA GCGCCATGTC CCTGATCCAG GCAGCCAAGA ACTTGATGAA CGCTGTAGTG 
CAGACAGTGA AGGCGTCCTA CGTGGCTTCC ACCAAATACC AGAAGTCACA GGGGATGGCG 
TCCCTCAACC TTCCTGCTGT GTCATGGAAA ATGAAAGCCC CCGAGAAGAA GCCCTTGGTG 
AAGAGAGAGA AGCAGGATGA GACACAGACC AAGATCAAGC GGGCCTCCCA GAAGAAGCAC 
GTGAACCCTG TGCAGGCCCT CAGCGAGTTC AAGGCCATGG ACAGCATCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ctnna1 ( XM_017600965.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017456454.1 Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa59274
Clone ID Related Accession (Same CDS sequence)	XM_017600965.1
Accession Version	XM_017600965.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1563bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	catenin alpha-1 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACCACG TATCAGATTC CTTCCTGGAG ACCAATGTCC CTCTTTTAGT ACTGATTGAA 
GCTGCAAAGA ATGGAAACGA GAAGGAGGTT AAGGAGTATG CCCAGGTTTT TCGTGAACAC 
GCCAACAAAC TGATTGAGGT CGCCAACTTG GCCTGTTCAA TCTCCAATAA TGAAGAAGGC 
GTGAAGCTCG TTCGGATGTC TGCAAGTCAG TTAGAAGCGC TCTGTCCTCA GGTTATCAAT 
GCTGCGTTGG CTTTAGCGGC AAAGCCACAG AGTAAACTGG CCCAAGAGAA CATGGATCTT 
TTTAAAGAGC AGTGGGAAAA ACAAGTCCGT GTTCTCACAG ATGCTGTTGA TGACATTACT 
TCCATTGATG ACTTCTTGGC TGTCTCAGAG AACCACATTT TGGAAGATGT GAACAAGTGT 
GTTATCGCTC TCCAAGAGAA AGACGTGGAT GGGCTGGATC GCACTGCTGG GGCCATTCGA 
GGCCGGGCAG CCCGAGTCAT TCATGTCGTC ACCTCAGAGA TGGACAACTA CGAGCCAGGA 
GTTTACACAG AAAAGGTTCT AGAAGCCACC AAACTCCTCT CCAACACAGT CATGCCGCGT 
TTCACTGAGC AAGTGGAAGC AGCTGTGGAA GCCCTCAGCT CAGACCCCGC CCAGCCTATG 
GATGAGAATG AGTTCATCGA CGCCTCCCGT CTGGTATACG ACGGCATCCG GGACATCCGC 
AAGGCCGTGC TGATGATAAG GACCCCCGAG GAGTTGGACG ACTCTGACTT CGAGACTGAA 
GACTTTGATG TCAGAAGCAG GACCAGTGTC CAGACAGAAG ATGACCAGCT GATAGCTGGA 
CAGAGCGCCC GGGCGATCAT GGCTCAGCTT CCTCAGGAGC AGAAGGCAAA GATCGCAGAG 
CAGGTGGCCA GCTTCCAGGA GGAGAAGAGC AAGCTGGACG CTGAGGTGTC CAAGTGGGAC 
GACAGCGGCA ATGACATCAT TGTGCTGGCC AAGCAGATGT GCATGATCAT GATGGAGATG 
ACCGACTTCA CCCGAGGCAA AGGGCCACTC AAAAACACAT CGGATGTGAT CAGTGCTGCC 
AAGAAAATTG CTGAGGCAGG ATCCAGGATG GATAAGCTTG GCCGGACCAT CGCAGACCAC 
TGCCCAGACT CCGCCTGCAA GCAGGACCTG CTGGCCTACC TTCAGCGCAT CGCGCTCTAC 
TGCCACCAGC TCAACATCTG CAGCAAGGTC AAGGCTGAAG TACAGAACCT CGGTGGAGAG 
CTTGTCGTCT CTGGGGTGGA CAGCGCCATG TCCCTGATCC AGGCAGCCAA GAACTTGATG 
AACGCTGTAG TGCAGACAGT GAAGGCGTCC TACGTGGCTT CCACCAAATA CCAGAAGTCA 
CAGGGGATGG CGTCCCTCAA CCTTCCTGCT GTGTCATGGA AAATGAAAGC CCCCGAGAAG 
AAGCCCTTGG TGAAGAGAGA GAAGCAGGAT GAGACACAGA CCAAGATCAA GCGGGCCTCC 
CAGAAGAAGC ACGTGAACCC TGTGCAGGCC CTCAGCGAGT TCAAGGCCAT GGACAGCATC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017456454.1
CDS	140..1702
Translation	MDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI

Target ORF information:

RefSeq Version	XM_017600965.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus catenin alpha 1 (Ctnna1), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017600965.1

ORF Insert Sequence:

ATGGACCACG TATCAGATTC CTTCCTGGAG ACCAATGTCC CTCTTTTAGT ACTGATTGAA 
GCTGCAAAGA ATGGAAACGA GAAGGAGGTT AAGGAGTATG CCCAGGTTTT TCGTGAACAC 
GCCAACAAAC TGATTGAGGT CGCCAACTTG GCCTGTTCAA TCTCCAATAA TGAAGAAGGC 
GTGAAGCTCG TTCGGATGTC TGCAAGTCAG TTAGAAGCGC TCTGTCCTCA GGTTATCAAT 
GCTGCGTTGG CTTTAGCGGC AAAGCCACAG AGTAAACTGG CCCAAGAGAA CATGGATCTT 
TTTAAAGAGC AGTGGGAAAA ACAAGTCCGT GTTCTCACAG ATGCTGTTGA TGACATTACT 
TCCATTGATG ACTTCTTGGC TGTCTCAGAG AACCACATTT TGGAAGATGT GAACAAGTGT 
GTTATCGCTC TCCAAGAGAA AGACGTGGAT GGGCTGGATC GCACTGCTGG GGCCATTCGA 
GGCCGGGCAG CCCGAGTCAT TCATGTCGTC ACCTCAGAGA TGGACAACTA CGAGCCAGGA 
GTTTACACAG AAAAGGTTCT AGAAGCCACC AAACTCCTCT CCAACACAGT CATGCCGCGT 
TTCACTGAGC AAGTGGAAGC AGCTGTGGAA GCCCTCAGCT CAGACCCCGC CCAGCCTATG 
GATGAGAATG AGTTCATCGA CGCCTCCCGT CTGGTATACG ACGGCATCCG GGACATCCGC 
AAGGCCGTGC TGATGATAAG GACCCCCGAG GAGTTGGACG ACTCTGACTT CGAGACTGAA 
GACTTTGATG TCAGAAGCAG GACCAGTGTC CAGACAGAAG ATGACCAGCT GATAGCTGGA 
CAGAGCGCCC GGGCGATCAT GGCTCAGCTT CCTCAGGAGC AGAAGGCAAA GATCGCAGAG 
CAGGTGGCCA GCTTCCAGGA GGAGAAGAGC AAGCTGGACG CTGAGGTGTC CAAGTGGGAC 
GACAGCGGCA ATGACATCAT TGTGCTGGCC AAGCAGATGT GCATGATCAT GATGGAGATG 
ACCGACTTCA CCCGAGGCAA AGGGCCACTC AAAAACACAT CGGATGTGAT CAGTGCTGCC 
AAGAAAATTG CTGAGGCAGG ATCCAGGATG GATAAGCTTG GCCGGACCAT CGCAGACCAC 
TGCCCAGACT CCGCCTGCAA GCAGGACCTG CTGGCCTACC TTCAGCGCAT CGCGCTCTAC 
TGCCACCAGC TCAACATCTG CAGCAAGGTC AAGGCTGAAG TACAGAACCT CGGTGGAGAG 
CTTGTCGTCT CTGGGGTGGA CAGCGCCATG TCCCTGATCC AGGCAGCCAA GAACTTGATG 
AACGCTGTAG TGCAGACAGT GAAGGCGTCC TACGTGGCTT CCACCAAATA CCAGAAGTCA 
CAGGGGATGG CGTCCCTCAA CCTTCCTGCT GTGTCATGGA AAATGAAAGC CCCCGAGAAG 
AAGCCCTTGG TGAAGAGAGA GAAGCAGGAT GAGACACAGA CCAAGATCAA GCGGGCCTCC 
CAGAAGAAGC ACGTGAACCC TGTGCAGGCC CTCAGCGAGT TCAAGGCCAT GGACAGCATC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Cadherin 26 is an alpha integrin-binding epithelial receptor regulated during allergic inflammation.
Mucosal immunology10(5)1190-1201(2017 Sep)
Caldwell JM,Collins MH,Kemme KA,Sherrill JD,Wen T,Rochman M,Stucke EM,Amin L,Tai H,Putnam PE,Jim?nez-Dalmaroni MJ,Wormald MR,Porollo A,Abonia JP,Rothenberg ME

Annexin-1 Mediates Microglial Activation and Migration via the CK2 Pathway during Oxygen-Glucose Deprivation/Reperfusion.
International journal of molecular sciences17(10)(2016 Oct)
Liu S,Gao Y,Yu X,Zhao B,Liu L,Zhao Y,Luo Z,Shi J

Alpha-Catulin Co-Localizes With Vimentin Intermediate Filaments and Functions in Pulmonary Vascular Endothelial Cell Migration via ROCK.
Journal of cellular physiology231(4)934-43(2016 Apr)
Bear MD,Liu T,Abualkhair S,Ghamloush MA,Hill NS,Preston I,Fanburg BL,Kayyali US,Toksoz D

E-cadherin interactome complexity and robustness resolved by quantitative proteomics.
Science signaling7(354)rs7(2014 Dec)
Guo Z,Neilson LJ,Zhong H,Murray PS,Zanivan S,Zaidel-Bar R

Loss of ?(E)-catenin potentiates cisplatin-induced nephrotoxicity via increasing apoptosis in renal tubular epithelial cells.
Toxicological sciences : an official journal of the Society of Toxicology141(1)254-62(2014 Sep)
Wang X,Grunz-Borgmann EA,Parrish AR

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Ctnna1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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