Abt1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Abt1
Entrez Gene ID	306960
Full Name	activator of basal transcription 1
General protein information	Preferred Names activator of basal transcription 1 Names activator of basal transcription 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 17 Map Location: 17p11

mRNA and Protein(s)

mRNA	Protein	Name
NM_001025674.1	NP_001020845.1	activator of basal transcription 1
XM_006253972.3	XP_006254034.1	activator of basal transcription 1 isoform X1

Pathways from BioSystems

Homologies

Bos taurus (cattle)	ABT1	NP_001069620.1
	ABT1	XP_001092231.2
Pan troglodytes (chimpanzee)	ABT1	XP_001173335.1
Mus musculus (house mouse)	Abt1	NP_038952.1
Rattus norvegicus (Norway rat)	Abt1	NP_001020845.1
Danio rerio (zebrafish)	abt1	NP_001018383.1
Homo sapiens (human)	ABT1	NP_037507.1
Canis lupus familiaris (dog)	ABT1	XP_003640216.1

Gene Ontology
Bibliography

Related articles in PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)

Biochemical and genetic evidence for a role of IGHMBP2 in the translational machinery.
de Planell-Saguer M, Schroeder DG, Rodicio MC, Cox GA, Mourelatos Z
Human molecular genetics18(12)2115-26(2009 Jun)

A novel TATA-binding protein-binding protein, ABT1, activates basal transcription and has a yeast homolog that is essential for growth.
Oda T, Kayukawa K, Hagiwara H, Yudate HT, Masuho Y, Murakami Y, Tamura TA, Muramatsu MA
Molecular and cellular biology20(4)1407-18(2000 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Abt1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Abt1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa07509	NM_001025674.1 Latest version!	Rattus norvegicus activator of basal transcription 1 (Abt1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$188.30 $269.00
ORa37905	XM_006253972.3 Latest version!	Rattus norvegicus activator of basal transcription 1 (Abt1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Abt1 ( NM_001025674.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001020845.1 Rattus norvegicus activator of basal transcription 1 (Abt1), mRNA.

Price & Availability↑

CloneID	ORa07509
Clone ID Related Accession (Same CDS sequence)	NM_001025674.1
Accession Version	NM_001025674.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 807bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-23
Organism	Rattus norvegicus(Norway rat)
Product	activator of basal transcription 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC099109.1 and CV121702.1. On or before Dec 5, 2007 this sequence version replaced XM_001072491.1, XM_225368.4. ##Evidence-Data-START## Transcript exon combination :: BC099109.1, EX489012.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGGTGAAAG TAGGAAAGCT GGTGGAGGAG CAAAAGGCGG CGATGGAGGA AGAGAAAGAG 
GTGAATGCAG AGGCGGCGGA GGAGCTGGAG GAGGCCGAGG AAGCGTCCTG CAACGGCAGC 
AAGAAGAAGG TAGTTCCGGG TATTGTGTAC TTGGGCCACG TCCCGCCGCG ATTCCGGCCC 
CTGCACGTTC GCAACCTGCT CAGCGTCTAC GGTGAGGTGG GACGCGTTTT CTTCCAGGCC 
GAGGACCCCT TTGTGAGACG AAAAAAGAAG GCAGCCGCGG CTGCAGGAGG AAAGAAGGGA 
GCTAAATACA GCAAGGACTA TACCGAAGGC TGGGTGGAGT TCCGAGACAA ACGCATAGCC 
AAGCGAGTGG CAGCTAGTCT ACATAACACA CCCATGGGTG CCCGCAAGCG CAGTCCCTTC 
CGTTATGACC TGTGGAACCT CAAGTATTTG CATCGTTTTA CTTGGTCCCA CCTCAGTGAA 
CACCTTGCCT TTGAGCGCCA GGTACGAAGG CAACGCCTGA GAGCAGAGGT TGCCCAAGCG 
AAACGAGAGA CTGACTTCTA TCTTCGAAAC GTAGAACAGG GACAACGCTT TCTTGCAGCT 
GATGGGGATG CTACTCGACC AAATAGCTCC TGGACATTTA CTCAACGTCC CACTGAGCAG 
GAGCTGAGGG CCCAGAAAGG AGCACGGCCA GGAGGGCGGG AACGAGCTCG GCTGGCCACA 
GTCCAGGACC AGGCCCGATC CAACAGAGGG CTACTTGCCA GGATCTTTGG GGCCTCTCTA 
CTTGCAGAGA GCAGGAAAGA ACCGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001020845.1
CDS	52..858
Translation	MVKVGKLVEEQKAAMEEEKEVNAEAAEELEEAEEASCNGSKKKVVPGIVYLGHVPPRFRPLHVRNLLSVYGEVGRVFFQAEDPFVRRKKKAAAAAGGKKGAKYSKDYTEGWVEFRDKRIAKRVAASLHNTPMGARKRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRNVEQGQRFLAADGDATRPNSSWTFTQRPTEQELRAQKGARPGGRERARLATVQDQARSNRGLLARIFGASLLAESRKEP

Target ORF information:

RefSeq Version	NM_001025674.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus activator of basal transcription 1 (Abt1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001025674.1

ORF Insert Sequence:

ATGGTGAAAG TAGGAAAGCT GGTGGAGGAG CAAAAGGCGG CGATGGAGGA AGAGAAAGAG 
GTGAATGCAG AGGCGGCGGA GGAGCTGGAG GAGGCCGAGG AAGCGTCCTG CAACGGCAGC 
AAGAAGAAGG TAGTTCCGGG TATTGTGTAC TTGGGCCACG TCCCGCCGCG ATTCCGGCCC 
CTGCACGTTC GCAACCTGCT CAGCGTCTAC GGTGAGGTGG GACGCGTTTT CTTCCAGGCC 
GAGGACCCCT TTGTGAGACG AAAAAAGAAG GCAGCCGCGG CTGCAGGAGG AAAGAAGGGA 
GCTAAATACA GCAAGGACTA TACCGAAGGC TGGGTGGAGT TCCGAGACAA ACGCATAGCC 
AAGCGAGTGG CAGCTAGTCT ACATAACACA CCCATGGGTG CCCGCAAGCG CAGTCCCTTC 
CGTTATGACC TGTGGAACCT CAAGTATTTG CATCGTTTTA CTTGGTCCCA CCTCAGTGAA 
CACCTTGCCT TTGAGCGCCA GGTACGAAGG CAACGCCTGA GAGCAGAGGT TGCCCAAGCG 
AAACGAGAGA CTGACTTCTA TCTTCGAAAC GTAGAACAGG GACAACGCTT TCTTGCAGCT 
GATGGGGATG CTACTCGACC AAATAGCTCC TGGACATTTA CTCAACGTCC CACTGAGCAG 
GAGCTGAGGG CCCAGAAAGG AGCACGGCCA GGAGGGCGGG AACGAGCTCG GCTGGCCACA 
GTCCAGGACC AGGCCCGATC CAACAGAGGG CTACTTGCCA GGATCTTTGG GGCCTCTCTA 
CTTGCAGAGA GCAGGAAAGA ACCGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Abt1 ( XM_006253972.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006254034.1 Rattus norvegicus activator of basal transcription 1 (Abt1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa37905
Clone ID Related Accession (Same CDS sequence)	XM_006253972.3
Accession Version	XM_006253972.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	activator of basal transcription 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005116.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006253972.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTGAAAG TAGGAAAGCT GGTGGAGGAG CAAAAGGCGG CGATGGAGGA AGAGAAAGAG 
GTGAATGCAG AGGCGGCGGA GGAGCTGGAG GAGGCCGAGG AAGCGTCCTG CAACGGCAGC 
AAGAAGAAGG TAGTTCCGGG TATTGTGTAC TTGGGCCACG TCCCGCCGCG ATTCCGGCCC 
CTGCACGTTC GCAACCTGCT CAGCGTCTAC GACCCCTTTG TGAGACGAAA AAAGAAGGCA 
GCCGCGGCTG CAGGAGGAAA GAAGGGAGCT AAATACAGCA AGGACTATAC CGAAGGCTGG 
GTGGAGTTCC GAGACAAACG CATAGCCAAG CGAGTGGCAG CTAGTCTACA TAACACACCC 
ATGGGTGCCC GCAAGCGCAG TCCCTTCCGT TATGACCTGT GGAACCTCAA GTATTTGCAT 
CGTTTTACTT GGTCCCACCT CAGTGAACAC CTTGCCTTTG AGCGCCAGGT ACGAAGGCAA 
CGCCTGAGAG CAGAGGTTGC CCAAGCGAAA CGAGAGACTG ACTTCTATCT TCGAAACGTA 
GAACAGGGAC AACGCTTTCT TGCAGCTGAT GGGGATGCTA CTCGACCAAA TAGCTCCTGG 
ACATTTACTC AACGTCCCAC TGAGCAGGAG CTGAGGGCCC AGAAAGGAGC ACGGCCAGGA 
GGGCGGGAAC GAGCTCGGCT GGCCACAGTC CAGGACCAGG CCCGATCCAA CAGAGGGCTA 
CTTGCCAGGA TCTTTGGGGC CTCTCTACTT GCAGAGAGCA GGAAAGAACC GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006254034.1
CDS	64..837
Translation	MVKVGKLVEEQKAAMEEEKEVNAEAAEELEEAEEASCNGSKKKVVPGIVYLGHVPPRFRPLHVRNLLSVYDPFVRRKKKAAAAAGGKKGAKYSKDYTEGWVEFRDKRIAKRVAASLHNTPMGARKRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRNVEQGQRFLAADGDATRPNSSWTFTQRPTEQELRAQKGARPGGRERARLATVQDQARSNRGLLARIFGASLLAESRKEP

Target ORF information:

RefSeq Version	XM_006253972.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus activator of basal transcription 1 (Abt1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006253972.3

ORF Insert Sequence:

ATGGTGAAAG TAGGAAAGCT GGTGGAGGAG CAAAAGGCGG CGATGGAGGA AGAGAAAGAG 
GTGAATGCAG AGGCGGCGGA GGAGCTGGAG GAGGCCGAGG AAGCGTCCTG CAACGGCAGC 
AAGAAGAAGG TAGTTCCGGG TATTGTGTAC TTGGGCCACG TCCCGCCGCG ATTCCGGCCC 
CTGCACGTTC GCAACCTGCT CAGCGTCTAC GACCCCTTTG TGAGACGAAA AAAGAAGGCA 
GCCGCGGCTG CAGGAGGAAA GAAGGGAGCT AAATACAGCA AGGACTATAC CGAAGGCTGG 
GTGGAGTTCC GAGACAAACG CATAGCCAAG CGAGTGGCAG CTAGTCTACA TAACACACCC 
ATGGGTGCCC GCAAGCGCAG TCCCTTCCGT TATGACCTGT GGAACCTCAA GTATTTGCAT 
CGTTTTACTT GGTCCCACCT CAGTGAACAC CTTGCCTTTG AGCGCCAGGT ACGAAGGCAA 
CGCCTGAGAG CAGAGGTTGC CCAAGCGAAA CGAGAGACTG ACTTCTATCT TCGAAACGTA 
GAACAGGGAC AACGCTTTCT TGCAGCTGAT GGGGATGCTA CTCGACCAAA TAGCTCCTGG 
ACATTTACTC AACGTCCCAC TGAGCAGGAG CTGAGGGCCC AGAAAGGAGC ACGGCCAGGA 
GGGCGGGAAC GAGCTCGGCT GGCCACAGTC CAGGACCAGG CCCGATCCAA CAGAGGGCTA 
CTTGCCAGGA TCTTTGGGGC CTCTCTACTT GCAGAGAGCA GGAAAGAACC GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanh?usser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M

Biochemical and genetic evidence for a role of IGHMBP2 in the translational machinery.
Human molecular genetics18(12)2115-26(2009 Jun)
de Planell-Saguer M,Schroeder DG,Rodicio MC,Cox GA,Mourelatos Z

A novel TATA-binding protein-binding protein, ABT1, activates basal transcription and has a yeast homolog that is essential for growth.
Molecular and cellular biology20(4)1407-18(2000 Feb)
Oda T,Kayukawa K,Hagiwara H,Yudate HT,Masuho Y,Murakami Y,Tamura TA,Muramatsu MA

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Abt1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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