ORF » Species Summary » Rattus norvegicus » Col9a1 cDNA ORF clone

Col9a1 cDNA ORF clone, Rattus norvegicus(Norway rat)

The following Col9a1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Col9a1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa11138 NM_001100842.1
Latest version!		 Rattus norvegicus collagen type IX alpha 1 chain (Col9a1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $475.30
$679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    Col9a1 ( NM_001100842.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001094312.1 Rattus norvegicus collagen type IX alpha 1 chain (Col9a1), mRNA.
    Price & Availability↑
    CloneID ORa11138
    Clone ID Related Accession (Same CDS sequence) NM_001100842.1
    Accession Version NM_001100842.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2805bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-24
    Organism Rattus norvegicus(Norway rat)
    Product collagen alpha-1(IX) chain
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07067099.1, AABR07067100.1, DY316977.1, DY313373.1 and BQ191679.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01906348 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    ATGGTGACTC TTATAAACCC AAGAGAACCC ACTGGGAAAA TGAAGAACTT CTGGAAAATT 
    CCACTTTTCT TCTTTGCATG CAGTTTTCTG GGACCCTGTG TATCTGCAAC TCCTAAGCGT 
    CGTGCAAGAT TTCCTGCCAA TTCTGTTTCT CATGGTGGAA GTGAACTGTG TCCCAAGATC 
    AGGATTGGCC AGGATGACTT GCCAGGATTT GACCTGATTT CTCAGTTCCA AATTGAGAAG 
    GCTGCATCTC GAAGGACTAT CCAGAGGGTG GTGGGGTCCA CAGCGTTACA AGTGGCTTAC 
    AAGCTGGGAA GTAATGTAGA CTTCAGGATT CCAACAAGGC ATTTGTATCC CAGTGGACTG 
    CCTGAAGAAT ATTCCTTTTT AACTACTTTC CGGATGACTG GAAGCACACT TGAAAAGCAA 
    TGGAACATTT GGCAGATCCA GGATTCCTCA GGGAGGGAGC AAGTTGGCGT GAAGATAAAT 
    GGCCAAACAA AGTCTGTCGC GTTTTCATAC AAGGGACTGG ACGGGAGTCT CCAAACGGCA 
    GCCTTCTTGA ATTTGCAGTC CTTGTTTGAC TCCCGTTGGC ATAAGCTCAT GATTGGCGTG 
    GAGAGAACAA GAGCTACTCT TTTTATTGAC TGCATCCAGA TCGATTCCTT ACCTATAAAG 
    CCGAGAGCCC AGATCGATGC TGATGGCTTT GCTGTGCTGG GAAAACTTGT GGACAATCCT 
    CAGGTTTCTG TTCCCTTTGA ACTCCAGTGG ATGCTGATTC ACTGTGACCC CCTGAGACCC 
    CGGAGAGAGA CGTGCCATGA ACTGCCAGTC AGAATCACAA CCAGCCAGAC CACCGATGAG 
    AGAGGTCCTC CGGGTGAGCA GGGGCCTCCG GGGCCTCCCG GGCCTCCTGG AGTTCCGGGC 
    ATAGATGGTA TTGATGGTGA CCGAGGTCCA AAGGGTCCCC CCGGACCTCC GGGTCCTCCT 
    GGAGACCCGG GCAAGCCAGG AGCACCAGGC AAGCCAGGCA CTCCAGGAGC TGATGGATTA 
    ACAGGACCTG ATGGGTCCCC GGGCTCCGTT GGACCAAGGG GACAAAAAGG AGAACCTGGT 
    GTGCCTGGGT CTCGTGGATT TCCAGGCCGT GGCATTCCAG GACCCCCTGG CCCTCCTGGG 
    ACCACAGGAC TTCCTGGAGA ACTTGGCCGA GTAGGCCCTG CTGGCGACCC TGGGAAAAGA 
    GGACCACCTG GTCCTCCTGG ACCCCCAGGA CCTAGTGGAA CAATTGGATT TCATGATGGA 
    GACCCATTGT GCCCCAATTC CTGCCCACCA GGTCGCTCTG GCTATCCAGG CCTACCAGGC 
    ATGAGAGGCC ACAAAGGGGC GAAAGGAGAA ATTGGCGAGC CAGGAAGACA AGGACACAAG 
    GGTGAAGAGG GTGACCAGGG GGAACTGGGA GAAGTTGGAG CTCAAGGACC TCCAGGAGCT 
    CAAGGTCTGA GAGGCATCAC TGGCATAGTT GGAGACAAAG GAGAAAAAGG TGCTCGGGGA 
    TTCGATGGAG ATCCTGGGCC TCAGGGCGTT CCAGGTGCAG CTGGTGATCA AGGGCAGCGA 
    GGACCTCCAG GAGAAACAGG TCCTAAGGGA GACAGGGGCA TTCAAGGTTC CCGAGGAATT 
    CCTGGATCCC CGGGTCCAAA AGGAGACACG GGCTTGCCAG GTGTCGATGG TCGAGACGGA 
    ATCCCGGGAA TGCCTGGAAC AAAGGGTGAA GCAGGAAAGC CTGGACCTCC CGGTGATGCG 
    GGATTGCAGG GTTTACCGGG TGTACCTGGG ATTCCTGGTG CAAAAGGTGT GGCCGGCGAA 
    AAGGGTAACA CGGGTCCTCC GGGGAAGCCT GGTCAGTTGG GAAGTTCAGG AAAACCAGGC 
    CAACAAGGAC CGCCGGGAGA GGTTGGACCT CGGGGACCCA GGGGCCTTCC AGGCAGCAGA 
    GGCCCGGTAG GACCAGAAGG CTCTCCAGGC ATACCAGGGA AACTGGGACC TCTTGGCAGC 
    CCTGGCCTTC CTGGCTTGCC TGGGCCCCCT GGACTTCCTG GAATGAAAGG AGACAGGGGT 
    GTATTTGGTG AACCAGGTCC CAAGGGCGAA CAGGGTGCCT CTGGTGAAGA AGGTGAAGCA 
    GGAGTAAGGG GTGACCTTGG AGATATGGGA CAACCTGGCC CAAAGGGATC AGTGGGTAAC 
    CCTGGGGAGC CCGGCCTGAG GGGACCTGAA GGAATCAGAG GGCTTCCTGG AGTGGAAGGA 
    CCAAGAGGAC CACCTGGACC CCGAGGTGTG CAAGGAGAAC AGGGTGCCAC TGGACTGCCT 
    GGTATCCAGG GACCTCCGGG CAGAGCGCCG ACGGACCAGC ACATCAAGCA GGTTTGCATG 
    AGAGTTGTGC AAGAGCATTT TGCAGAAATG GCAGCTAGCC TCAAGAGACC AGACACAGGA 
    GCTTCTGGTC TTCCTGGGAG GCCTGGTCCC CCAGGGCCTC CCGGCCCTCC AGGAGAGAAT 
    GGTTTCCCTG GTCAGATGGG AATCCGTGGC CTTCCAGGCA TTAAGGGTCC CCCTGGTGCT 
    CTTGGCTTAA GGGGACCTAA AGGTGACTTG GGAGAAAAAG GAGAACGTGG TCCTCCAGGA 
    AGAGGTCCTA AGGGTTTGCC TGGAGCTATC GGTCTCCCAG GTGATCCAGG CCCTGCCAGC 
    TATGGGAAAA ATGGCCGAGA TGGAGAGCAA GGTCCCCCAG GAGTGGCAGG AATTCCTGGT 
    GTGCCTGGGC CCCCAGGTCC TCCAGGCCCT CCTGGTTTCT GTGAGCCAGC CTCTTGCACC 
    CTTCAGGCAG GTCAAAGAGC ATTTAGCAAA GGGCCTGACA AGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001094312.1
    CDS207..3011
    Translation

    Target ORF information:

    RefSeq Version NM_001100842.1
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus collagen type IX alpha 1 chain (Col9a1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001100842.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    ATGGTGACTC TTATAAACCC AAGAGAACCC ACTGGGAAAA TGAAGAACTT CTGGAAAATT 
    CCACTTTTCT TCTTTGCATG CAGTTTTCTG GGACCCTGTG TATCTGCAAC TCCTAAGCGT 
    CGTGCAAGAT TTCCTGCCAA TTCTGTTTCT CATGGTGGAA GTGAACTGTG TCCCAAGATC 
    AGGATTGGCC AGGATGACTT GCCAGGATTT GACCTGATTT CTCAGTTCCA AATTGAGAAG 
    GCTGCATCTC GAAGGACTAT CCAGAGGGTG GTGGGGTCCA CAGCGTTACA AGTGGCTTAC 
    AAGCTGGGAA GTAATGTAGA CTTCAGGATT CCAACAAGGC ATTTGTATCC CAGTGGACTG 
    CCTGAAGAAT ATTCCTTTTT AACTACTTTC CGGATGACTG GAAGCACACT TGAAAAGCAA 
    TGGAACATTT GGCAGATCCA GGATTCCTCA GGGAGGGAGC AAGTTGGCGT GAAGATAAAT 
    GGCCAAACAA AGTCTGTCGC GTTTTCATAC AAGGGACTGG ACGGGAGTCT CCAAACGGCA 
    GCCTTCTTGA ATTTGCAGTC CTTGTTTGAC TCCCGTTGGC ATAAGCTCAT GATTGGCGTG 
    GAGAGAACAA GAGCTACTCT TTTTATTGAC TGCATCCAGA TCGATTCCTT ACCTATAAAG 
    CCGAGAGCCC AGATCGATGC TGATGGCTTT GCTGTGCTGG GAAAACTTGT GGACAATCCT 
    CAGGTTTCTG TTCCCTTTGA ACTCCAGTGG ATGCTGATTC ACTGTGACCC CCTGAGACCC 
    CGGAGAGAGA CGTGCCATGA ACTGCCAGTC AGAATCACAA CCAGCCAGAC CACCGATGAG 
    AGAGGTCCTC CGGGTGAGCA GGGGCCTCCG GGGCCTCCCG GGCCTCCTGG AGTTCCGGGC 
    ATAGATGGTA TTGATGGTGA CCGAGGTCCA AAGGGTCCCC CCGGACCTCC GGGTCCTCCT 
    GGAGACCCGG GCAAGCCAGG AGCACCAGGC AAGCCAGGCA CTCCAGGAGC TGATGGATTA 
    ACAGGACCTG ATGGGTCCCC GGGCTCCGTT GGACCAAGGG GACAAAAAGG AGAACCTGGT 
    GTGCCTGGGT CTCGTGGATT TCCAGGCCGT GGCATTCCAG GACCCCCTGG CCCTCCTGGG 
    ACCACAGGAC TTCCTGGAGA ACTTGGCCGA GTAGGCCCTG CTGGCGACCC TGGGAAAAGA 
    GGACCACCTG GTCCTCCTGG ACCCCCAGGA CCTAGTGGAA CAATTGGATT TCATGATGGA 
    GACCCATTGT GCCCCAATTC CTGCCCACCA GGTCGCTCTG GCTATCCAGG CCTACCAGGC 
    ATGAGAGGCC ACAAAGGGGC GAAAGGAGAA ATTGGCGAGC CAGGAAGACA AGGACACAAG 
    GGTGAAGAGG GTGACCAGGG GGAACTGGGA GAAGTTGGAG CTCAAGGACC TCCAGGAGCT 
    CAAGGTCTGA GAGGCATCAC TGGCATAGTT GGAGACAAAG GAGAAAAAGG TGCTCGGGGA 
    TTCGATGGAG ATCCTGGGCC TCAGGGCGTT CCAGGTGCAG CTGGTGATCA AGGGCAGCGA 
    GGACCTCCAG GAGAAACAGG TCCTAAGGGA GACAGGGGCA TTCAAGGTTC CCGAGGAATT 
    CCTGGATCCC CGGGTCCAAA AGGAGACACG GGCTTGCCAG GTGTCGATGG TCGAGACGGA 
    ATCCCGGGAA TGCCTGGAAC AAAGGGTGAA GCAGGAAAGC CTGGACCTCC CGGTGATGCG 
    GGATTGCAGG GTTTACCGGG TGTACCTGGG ATTCCTGGTG CAAAAGGTGT GGCCGGCGAA 
    AAGGGTAACA CGGGTCCTCC GGGGAAGCCT GGTCAGTTGG GAAGTTCAGG AAAACCAGGC 
    CAACAAGGAC CGCCGGGAGA GGTTGGACCT CGGGGACCCA GGGGCCTTCC AGGCAGCAGA 
    GGCCCGGTAG GACCAGAAGG CTCTCCAGGC ATACCAGGGA AACTGGGACC TCTTGGCAGC 
    CCTGGCCTTC CTGGCTTGCC TGGGCCCCCT GGACTTCCTG GAATGAAAGG AGACAGGGGT 
    GTATTTGGTG AACCAGGTCC CAAGGGCGAA CAGGGTGCCT CTGGTGAAGA AGGTGAAGCA 
    GGAGTAAGGG GTGACCTTGG AGATATGGGA CAACCTGGCC CAAAGGGATC AGTGGGTAAC 
    CCTGGGGAGC CCGGCCTGAG GGGACCTGAA GGAATCAGAG GGCTTCCTGG AGTGGAAGGA 
    CCAAGAGGAC CACCTGGACC CCGAGGTGTG CAAGGAGAAC AGGGTGCCAC TGGACTGCCT 
    GGTATCCAGG GACCTCCGGG CAGAGCGCCG ACGGACCAGC ACATCAAGCA GGTTTGCATG 
    AGAGTTGTGC AAGAGCATTT TGCAGAAATG GCAGCTAGCC TCAAGAGACC AGACACAGGA 
    GCTTCTGGTC TTCCTGGGAG GCCTGGTCCC CCAGGGCCTC CCGGCCCTCC AGGAGAGAAT 
    GGTTTCCCTG GTCAGATGGG AATCCGTGGC CTTCCAGGCA TTAAGGGTCC CCCTGGTGCT 
    CTTGGCTTAA GGGGACCTAA AGGTGACTTG GGAGAAAAAG GAGAACGTGG TCCTCCAGGA 
    AGAGGTCCTA AGGGTTTGCC TGGAGCTATC GGTCTCCCAG GTGATCCAGG CCCTGCCAGC 
    TATGGGAAAA ATGGCCGAGA TGGAGAGCAA GGTCCCCCAG GAGTGGCAGG AATTCCTGGT 
    GTGCCTGGGC CCCCAGGTCC TCCAGGCCCT CCTGGTTTCT GTGAGCCAGC CTCTTGCACC 
    CTTCAGGCAG GTCAAAGAGC ATTTAGCAAA GGGCCTGACA AGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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