Irf5 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Irf5
Entrez Gene ID	296953
Full Name	interferon regulatory factor 5
General protein information	Preferred Names interferon regulatory factor 5 Names interferon regulatory factor 5
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 4 Map Location: 4q22

mRNA and Protein(s)

mRNA	Protein	Name
XM_006236184.3	XP_006236246.1	interferon regulatory factor 5 isoform X3
NM_001106586.1	NP_001100056.1	interferon regulatory factor 5
XM_006236183.3	XP_006236245.1	interferon regulatory factor 5 isoform X2
XM_006236185.3	XP_006236247.1	interferon regulatory factor 5 isoform X3
XM_006236180.2	XP_006236242.1	interferon regulatory factor 5 isoform X1
XM_008762765.2	XP_008760987.1	interferon regulatory factor 5 isoform X3

Pathways from BioSystems

Homologies

Homo sapiens (human)	IRF5	NP_001092099.1
	IRF5	XP_001092569.1
Bos taurus (cattle)	IRF5	NP_001030542.1
Rattus norvegicus (Norway rat)	Irf5	NP_001100056.1
Gallus gallus (chicken)	IRF5	NP_001026758.1
Pan troglodytes (chimpanzee)	IRF5	XP_001154747.1
Canis lupus familiaris (dog)	IRF5	XP_005628465.1
Mus musculus (house mouse)	Irf5	NP_001239311.1

Gene Ontology
Bibliography

Related articles in PubMed

DNA-binding specificities of human transcription factors.
Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J
Cell152(1-2)327-39(2013 Jan)

Activation of interferon regulatory factor 5 by site specific phosphorylation.
Chang Foreman HC, Van Scoy S, Cheng TF, Reich NC
PloS one7(3)e33098(2012)

Peroxisomes are signaling platforms for antiviral innate immunity.
Dixit E, Boulant S, Zhang Y, Lee AS, Odendall C, Shum B, Hacohen N, Chen ZJ, Whelan SP, Fransen M, Nibert ML, Superti-Furga G, Kagan JC
Cell141(4)668-81(2010 May)

Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5.
Chen W, Lam SS, Srinath H, Jiang Z, Correia JJ, Schiffer CA, Fitzgerald KA, Lin K, Royer WE Jr
Nature structural & molecular biology15(11)1213-20(2008 Nov)

Virus-induced heterodimer formation between IRF-5 and IRF-7 modulates assembly of the IFNA enhanceosome in vivo and transcriptional activity of IFNA genes.
Barnes BJ, Field AE, Pitha-Rowe PM
The Journal of biological chemistry278(19)16630-41(2003 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Irf5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Irf5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa04820	NM_001106586.1 Latest version!	Rattus norvegicus interferon regulatory factor 5 (Irf5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$293.30 $419.00
ORa27086	XM_006236180.2 Latest version!	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00
ORa27089	XM_006236183.3 Latest version!	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00
ORa27090	XM_006236184.3 Latest version!	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00
ORa27090	XM_006236185.3 Latest version!	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00
ORa27090	XM_008762765.2 Latest version!	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Irf5 ( NM_001106586.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001100056.1 Rattus norvegicus interferon regulatory factor 5 (Irf5), mRNA.

Price & Availability↑

CloneID	ORa04820
Clone ID Related Accession (Same CDS sequence)	NM_001106586.1
Accession Version	NM_001106586.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1494bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-10-07
Organism	Rattus norvegicus(Norway rat)
Product	interferon regulatory factor 5
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473959.1. On or before Oct 4, 2007 this sequence version replaced XM_216105.4, XM_001064215.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMEA2689594 [ECO:0000350] ##Evidence-Data-END##

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGCTCCAG AGAATGCTAC CAGGCCTGAG TATCACAGAA 
CCTGTGCTAC CTGGGCCTCC CATAGCACCC TATTCCTTAC CCAAAGAAGA CACCAAGTGG 
CCACCTGCTC TCCAGCCACC TGTAGGGCTG GGTCCCCCTC CCCCAGACCC AAATCTCCTG 
GCCCCTCCCT CTGGAGATTC TGCTGGCTTT AGGCAGCTTC TCCCTGAGGT CCTGGAGCCT 
GGACCCCTGG CTTCCAACCA GCCCCCTACA GAACAACTCT TGCCTGACCT GCTCATCAGC 
CCCCACATGC TGCCTTTGAC TGACCTAGAG ATCAAGTTCC AGTACCGGGG ACGTCCACCG 
CGGGCCCTCA CCATCAGCAA CCCACAAGGC TGCAGGCTCT TCTATAGCCA GCTAGAGGCT 
ACCCAGGAGC AAGTGGAACT CTTTGGCCCT GTGACCCTGG AGCAAGTTCG CTTCCCTAGC 
CCAGAGGATA TCCCCAGTGA CAAGCAGCGC TTCTATACGA ACCAGCTGCT GGATGTCCTG 
GACCGAGGGC TCATCCTGCA GCTGCAGGGC CAGGACCTGT ATGCCATCCG TCTGTGCCAG 
TGTAAGGTGT TCTGGAGTGG GCCCTGTGCC TTGGCCCATG GTTCCTGCCC CAACCCCATC 
CAGCGGGAAG TCAAGACAAA GCTCTTTAGC CTAGAGCAGT TTCTCAATGA ACTCATCCTG 
TTCCAGAAGG GCCAAACCAA TACCCCACCA CCTTTTGAGA TCTTCTTTTG CTTTGGAGAA 
GAATGGCCTG ACCTCAAACC CCGAGAGAAG AAGCTCATTA CTGTACAGGT GGTACCTGTC 
GCAGCCCGGT TGCTGCTGGA GATGTTCTCA GGAGAGCTTT CTTGGTCAGC AGACAGCATT 
CGGCTGCAGA TCTCAAACCC GGATCTCAAA GACCACATGG TAGAGCAGTT CAAAGAGCTC 
CATCACATCT GGCAGTCCCA GCAGCGCTTG CAGCCCATGG TCCAGGCCCC TCCTGTGGCA 
GGCCTTGATG CTGGCCAGGG GCCCTGGCCC ATGCACCCAG TTGGCATGCA ATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001100056.1
CDS	90..1583
Translation	MNQSAPGIPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFQLYYDGPRDMPPQPYKIYEVCSNGPAPTESQPTDDYVLGEEEEEEDEELQRMLPGLSITEPVLPGPPIAPYSLPKEDTKWPPALQPPVGLGPPPPDPNLLAPPSGDSAGFRQLLPEVLEPGPLASNQPPTEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVTLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSCPNPIQREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVAGLDAGQGPWPMHPVGMQ

Target ORF information:

RefSeq Version	NM_001106586.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus interferon regulatory factor 5 (Irf5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001106586.1

ORF Insert Sequence:

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGCTCCAG AGAATGCTAC CAGGCCTGAG TATCACAGAA 
CCTGTGCTAC CTGGGCCTCC CATAGCACCC TATTCCTTAC CCAAAGAAGA CACCAAGTGG 
CCACCTGCTC TCCAGCCACC TGTAGGGCTG GGTCCCCCTC CCCCAGACCC AAATCTCCTG 
GCCCCTCCCT CTGGAGATTC TGCTGGCTTT AGGCAGCTTC TCCCTGAGGT CCTGGAGCCT 
GGACCCCTGG CTTCCAACCA GCCCCCTACA GAACAACTCT TGCCTGACCT GCTCATCAGC 
CCCCACATGC TGCCTTTGAC TGACCTAGAG ATCAAGTTCC AGTACCGGGG ACGTCCACCG 
CGGGCCCTCA CCATCAGCAA CCCACAAGGC TGCAGGCTCT TCTATAGCCA GCTAGAGGCT 
ACCCAGGAGC AAGTGGAACT CTTTGGCCCT GTGACCCTGG AGCAAGTTCG CTTCCCTAGC 
CCAGAGGATA TCCCCAGTGA CAAGCAGCGC TTCTATACGA ACCAGCTGCT GGATGTCCTG 
GACCGAGGGC TCATCCTGCA GCTGCAGGGC CAGGACCTGT ATGCCATCCG TCTGTGCCAG 
TGTAAGGTGT TCTGGAGTGG GCCCTGTGCC TTGGCCCATG GTTCCTGCCC CAACCCCATC 
CAGCGGGAAG TCAAGACAAA GCTCTTTAGC CTAGAGCAGT TTCTCAATGA ACTCATCCTG 
TTCCAGAAGG GCCAAACCAA TACCCCACCA CCTTTTGAGA TCTTCTTTTG CTTTGGAGAA 
GAATGGCCTG ACCTCAAACC CCGAGAGAAG AAGCTCATTA CTGTACAGGT GGTACCTGTC 
GCAGCCCGGT TGCTGCTGGA GATGTTCTCA GGAGAGCTTT CTTGGTCAGC AGACAGCATT 
CGGCTGCAGA TCTCAAACCC GGATCTCAAA GACCACATGG TAGAGCAGTT CAAAGAGCTC 
CATCACATCT GGCAGTCCCA GCAGCGCTTG CAGCCCATGG TCCAGGCCCC TCCTGTGGCA 
GGCCTTGATG CTGGCCAGGG GCCCTGGCCC ATGCACCCAG TTGGCATGCA ATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Irf5 ( XM_006236180.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006236242.1 Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa27086
Clone ID Related Accession (Same CDS sequence)	XM_006236180.2
Accession Version	XM_006236180.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1611bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	interferon regulatory factor 5 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006236180.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACTGGG GAGCTCGGTC ACACAGCCTC TCCACCCAGG GCACGGGGAA TCTTGCTATC 
AATTTGCAGA GCTGTGCTTT GCTTTCTCCC ACAGAGCCCT TTGCCATGAA CCAGTCAGCC 
CCAGGGATTC CCACACCACC CCGCCGTGTG AGGCTGAAGC CCTGGCTGGT GGCCCAGGTG 
AACAGCTGCC AGTACCCAGG GCTCCAGTGG GTCAACGGGG AAAAGAAACT CTTCTATATC 
CCCTGGCGCC ATGCTACAAG GCACGGTCCC AGCCAGGATG GAGACAACAC CATCTTCAAG 
GCCTGGGCTA AAGAGACAGG GAAGTACACG GAGGGCGTGG ATGAGGCTGA CCCAGCCAAA 
TGGAAGGCCA ACCTGCGCTG TGCCCTTAAC AAAAGCCGTG ACTTCCAGCT GTACTATGAT 
GGCCCTCGAG ACATGCCACC TCAGCCCTAC AAGATCTACG AGGTCTGCTC CAATGGCCCT 
GCTCCCACAG AGTCCCAGCC CACAGATGAT TACGTTCTGG GAGAAGAGGA GGAAGAGGAA 
GATGAAGAGG CTTCCCTTCA GCTCCAGAGA ATGCTACCAG GCCTGAGTAT CACAGAACCT 
GTGCTACCTG GGCCTCCCAT AGCACCCTAT TCCTTACCCA AAGAAGACAC CAAGTGGCCA 
CCTGCTCTCC AGCCACCTGT AGGGCTGGGT CCCCCTCCCC CAGACCCAAA TCTCCTGGCC 
CCTCCCTCTG GAGATTCTGC TGGCTTTAGG CAGCTTCTCC CTGAGGTCCT GGAGCCTGGA 
CCCCTGGCTT CCAACCAGCC CCCTACAGAA CAACTCTTGC CTGACCTGCT CATCAGCCCC 
CACATGCTGC CTTTGACTGA CCTAGAGATC AAGTTCCAGT ACCGGGGACG TCCACCGCGG 
GCCCTCACCA TCAGCAACCC ACAAGGCTGC AGGCTCTTCT ATAGCCAGCT AGAGGCTACC 
CAGGAGCAAG TGGAACTCTT TGGCCCTGTG ACCCTGGAGC AAGTTCGCTT CCCTAGCCCA 
GAGGATATCC CCAGTGACAA GCAGCGCTTC TATACGAACC AGCTGCTGGA TGTCCTGGAC 
CGAGGGCTCA TCCTGCAGCT GCAGGGCCAG GACCTGTATG CCATCCGTCT GTGCCAGTGT 
AAGGTGTTCT GGAGTGGGCC CTGTGCCTTG GCCCATGGTT CCTGCCCCAA CCCCATCCAG 
CGGGAAGTCA AGACAAAGCT CTTTAGCCTA GAGCAGTTTC TCAATGAACT CATCCTGTTC 
CAGAAGGGCC AAACCAATAC CCCACCACCT TTTGAGATCT TCTTTTGCTT TGGAGAAGAA 
TGGCCTGACC TCAAACCCCG AGAGAAGAAG CTCATTACTG TACAGGTGGT ACCTGTCGCA 
GCCCGGTTGC TGCTGGAGAT GTTCTCAGGA GAGCTTTCTT GGTCAGCAGA CAGCATTCGG 
CTGCAGATCT CAAACCCGGA TCTCAAAGAC CACATGGTAG AGCAGTTCAA AGAGCTCCAT 
CACATCTGGC AGTCCCAGCA GCGCTTGCAG CCCATGGTCC AGGCCCCTCC TGTGGCAGGC 
CTTGATGCTG GCCAGGGGCC CTGGCCCATG CACCCAGTTG GCATGCAATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006236242.1
CDS	1126..2736
Translation	MDWGARSHSLSTQGTGNLAINLQSCALLSPTEPFAMNQSAPGIPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFQLYYDGPRDMPPQPYKIYEVCSNGPAPTESQPTDDYVLGEEEEEEDEEASLQLQRMLPGLSITEPVLPGPPIAPYSLPKEDTKWPPALQPPVGLGPPPPDPNLLAPPSGDSAGFRQLLPEVLEPGPLASNQPPTEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVTLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSCPNPIQREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVAGLDAGQGPWPMHPVGMQ

Target ORF information:

RefSeq Version	XM_006236180.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006236180.2

ORF Insert Sequence:

ATGGACTGGG GAGCTCGGTC ACACAGCCTC TCCACCCAGG GCACGGGGAA TCTTGCTATC 
AATTTGCAGA GCTGTGCTTT GCTTTCTCCC ACAGAGCCCT TTGCCATGAA CCAGTCAGCC 
CCAGGGATTC CCACACCACC CCGCCGTGTG AGGCTGAAGC CCTGGCTGGT GGCCCAGGTG 
AACAGCTGCC AGTACCCAGG GCTCCAGTGG GTCAACGGGG AAAAGAAACT CTTCTATATC 
CCCTGGCGCC ATGCTACAAG GCACGGTCCC AGCCAGGATG GAGACAACAC CATCTTCAAG 
GCCTGGGCTA AAGAGACAGG GAAGTACACG GAGGGCGTGG ATGAGGCTGA CCCAGCCAAA 
TGGAAGGCCA ACCTGCGCTG TGCCCTTAAC AAAAGCCGTG ACTTCCAGCT GTACTATGAT 
GGCCCTCGAG ACATGCCACC TCAGCCCTAC AAGATCTACG AGGTCTGCTC CAATGGCCCT 
GCTCCCACAG AGTCCCAGCC CACAGATGAT TACGTTCTGG GAGAAGAGGA GGAAGAGGAA 
GATGAAGAGG CTTCCCTTCA GCTCCAGAGA ATGCTACCAG GCCTGAGTAT CACAGAACCT 
GTGCTACCTG GGCCTCCCAT AGCACCCTAT TCCTTACCCA AAGAAGACAC CAAGTGGCCA 
CCTGCTCTCC AGCCACCTGT AGGGCTGGGT CCCCCTCCCC CAGACCCAAA TCTCCTGGCC 
CCTCCCTCTG GAGATTCTGC TGGCTTTAGG CAGCTTCTCC CTGAGGTCCT GGAGCCTGGA 
CCCCTGGCTT CCAACCAGCC CCCTACAGAA CAACTCTTGC CTGACCTGCT CATCAGCCCC 
CACATGCTGC CTTTGACTGA CCTAGAGATC AAGTTCCAGT ACCGGGGACG TCCACCGCGG 
GCCCTCACCA TCAGCAACCC ACAAGGCTGC AGGCTCTTCT ATAGCCAGCT AGAGGCTACC 
CAGGAGCAAG TGGAACTCTT TGGCCCTGTG ACCCTGGAGC AAGTTCGCTT CCCTAGCCCA 
GAGGATATCC CCAGTGACAA GCAGCGCTTC TATACGAACC AGCTGCTGGA TGTCCTGGAC 
CGAGGGCTCA TCCTGCAGCT GCAGGGCCAG GACCTGTATG CCATCCGTCT GTGCCAGTGT 
AAGGTGTTCT GGAGTGGGCC CTGTGCCTTG GCCCATGGTT CCTGCCCCAA CCCCATCCAG 
CGGGAAGTCA AGACAAAGCT CTTTAGCCTA GAGCAGTTTC TCAATGAACT CATCCTGTTC 
CAGAAGGGCC AAACCAATAC CCCACCACCT TTTGAGATCT TCTTTTGCTT TGGAGAAGAA 
TGGCCTGACC TCAAACCCCG AGAGAAGAAG CTCATTACTG TACAGGTGGT ACCTGTCGCA 
GCCCGGTTGC TGCTGGAGAT GTTCTCAGGA GAGCTTTCTT GGTCAGCAGA CAGCATTCGG 
CTGCAGATCT CAAACCCGGA TCTCAAAGAC CACATGGTAG AGCAGTTCAA AGAGCTCCAT 
CACATCTGGC AGTCCCAGCA GCGCTTGCAG CCCATGGTCC AGGCCCCTCC TGTGGCAGGC 
CTTGATGCTG GCCAGGGGCC CTGGCCCATG CACCCAGTTG GCATGCAATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Irf5 ( XM_006236183.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006236245.1 Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa27089
Clone ID Related Accession (Same CDS sequence)	XM_006236183.3
Accession Version	XM_006236183.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1527bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	interferon regulatory factor 5 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236183.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGCGAAG AGCCCTTTGC CATGAACCAG TCAGCCCCAG GGATTCCCAC ACCACCCCGC 
CGTGTGAGGC TGAAGCCCTG GCTGGTGGCC CAGGTGAACA GCTGCCAGTA CCCAGGGCTC 
CAGTGGGTCA ACGGGGAAAA GAAACTCTTC TATATCCCCT GGCGCCATGC TACAAGGCAC 
GGTCCCAGCC AGGATGGAGA CAACACCATC TTCAAGGCCT GGGCTAAAGA GACAGGGAAG 
TACACGGAGG GCGTGGATGA GGCTGACCCA GCCAAATGGA AGGCCAACCT GCGCTGTGCC 
CTTAACAAAA GCCGTGACTT CCAGCTGTAC TATGATGGCC CTCGAGACAT GCCACCTCAG 
CCCTACAAGA TCTACGAGGT CTGCTCCAAT GGCCCTGCTC CCACAGAGTC CCAGCCCACA 
GATGATTACG TTCTGGGAGA AGAGGAGGAA GAGGAAGATG AAGAGGCTTC CCTTCAGCTC 
CAGAGAATGC TACCAGGCCT GAGTATCACA GAACCTGTGC TACCTGGGCC TCCCATAGCA 
CCCTATTCCT TACCCAAAGA AGACACCAAG TGGCCACCTG CTCTCCAGCC ACCTGTAGGG 
CTGGGTCCCC CTCCCCCAGA CCCAAATCTC CTGGCCCCTC CCTCTGGAGA TTCTGCTGGC 
TTTAGGCAGC TTCTCCCTGA GGTCCTGGAG CCTGGACCCC TGGCTTCCAA CCAGCCCCCT 
ACAGAACAAC TCTTGCCTGA CCTGCTCATC AGCCCCCACA TGCTGCCTTT GACTGACCTA 
GAGATCAAGT TCCAGTACCG GGGACGTCCA CCGCGGGCCC TCACCATCAG CAACCCACAA 
GGCTGCAGGC TCTTCTATAG CCAGCTAGAG GCTACCCAGG AGCAAGTGGA ACTCTTTGGC 
CCTGTGACCC TGGAGCAAGT TCGCTTCCCT AGCCCAGAGG ATATCCCCAG TGACAAGCAG 
CGCTTCTATA CGAACCAGCT GCTGGATGTC CTGGACCGAG GGCTCATCCT GCAGCTGCAG 
GGCCAGGACC TGTATGCCAT CCGTCTGTGC CAGTGTAAGG TGTTCTGGAG TGGGCCCTGT 
GCCTTGGCCC ATGGTTCCTG CCCCAACCCC ATCCAGCGGG AAGTCAAGAC AAAGCTCTTT 
AGCCTAGAGC AGTTTCTCAA TGAACTCATC CTGTTCCAGA AGGGCCAAAC CAATACCCCA 
CCACCTTTTG AGATCTTCTT TTGCTTTGGA GAAGAATGGC CTGACCTCAA ACCCCGAGAG 
AAGAAGCTCA TTACTGTACA GGTGGTACCT GTCGCAGCCC GGTTGCTGCT GGAGATGTTC 
TCAGGAGAGC TTTCTTGGTC AGCAGACAGC ATTCGGCTGC AGATCTCAAA CCCGGATCTC 
AAAGACCACA TGGTAGAGCA GTTCAAAGAG CTCCATCACA TCTGGCAGTC CCAGCAGCGC 
TTGCAGCCCA TGGTCCAGGC CCCTCCTGTG GCAGGCCTTG ATGCTGGCCA GGGGCCCTGG 
CCCATGCACC CAGTTGGCAT GCAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006236245.1
CDS	194..1720
Translation	MGEEPFAMNQSAPGIPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFQLYYDGPRDMPPQPYKIYEVCSNGPAPTESQPTDDYVLGEEEEEEDEEASLQLQRMLPGLSITEPVLPGPPIAPYSLPKEDTKWPPALQPPVGLGPPPPDPNLLAPPSGDSAGFRQLLPEVLEPGPLASNQPPTEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVTLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSCPNPIQREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVAGLDAGQGPWPMHPVGMQ

Target ORF information:

RefSeq Version	XM_006236183.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006236183.3

ORF Insert Sequence:

ATGGGCGAAG AGCCCTTTGC CATGAACCAG TCAGCCCCAG GGATTCCCAC ACCACCCCGC 
CGTGTGAGGC TGAAGCCCTG GCTGGTGGCC CAGGTGAACA GCTGCCAGTA CCCAGGGCTC 
CAGTGGGTCA ACGGGGAAAA GAAACTCTTC TATATCCCCT GGCGCCATGC TACAAGGCAC 
GGTCCCAGCC AGGATGGAGA CAACACCATC TTCAAGGCCT GGGCTAAAGA GACAGGGAAG 
TACACGGAGG GCGTGGATGA GGCTGACCCA GCCAAATGGA AGGCCAACCT GCGCTGTGCC 
CTTAACAAAA GCCGTGACTT CCAGCTGTAC TATGATGGCC CTCGAGACAT GCCACCTCAG 
CCCTACAAGA TCTACGAGGT CTGCTCCAAT GGCCCTGCTC CCACAGAGTC CCAGCCCACA 
GATGATTACG TTCTGGGAGA AGAGGAGGAA GAGGAAGATG AAGAGGCTTC CCTTCAGCTC 
CAGAGAATGC TACCAGGCCT GAGTATCACA GAACCTGTGC TACCTGGGCC TCCCATAGCA 
CCCTATTCCT TACCCAAAGA AGACACCAAG TGGCCACCTG CTCTCCAGCC ACCTGTAGGG 
CTGGGTCCCC CTCCCCCAGA CCCAAATCTC CTGGCCCCTC CCTCTGGAGA TTCTGCTGGC 
TTTAGGCAGC TTCTCCCTGA GGTCCTGGAG CCTGGACCCC TGGCTTCCAA CCAGCCCCCT 
ACAGAACAAC TCTTGCCTGA CCTGCTCATC AGCCCCCACA TGCTGCCTTT GACTGACCTA 
GAGATCAAGT TCCAGTACCG GGGACGTCCA CCGCGGGCCC TCACCATCAG CAACCCACAA 
GGCTGCAGGC TCTTCTATAG CCAGCTAGAG GCTACCCAGG AGCAAGTGGA ACTCTTTGGC 
CCTGTGACCC TGGAGCAAGT TCGCTTCCCT AGCCCAGAGG ATATCCCCAG TGACAAGCAG 
CGCTTCTATA CGAACCAGCT GCTGGATGTC CTGGACCGAG GGCTCATCCT GCAGCTGCAG 
GGCCAGGACC TGTATGCCAT CCGTCTGTGC CAGTGTAAGG TGTTCTGGAG TGGGCCCTGT 
GCCTTGGCCC ATGGTTCCTG CCCCAACCCC ATCCAGCGGG AAGTCAAGAC AAAGCTCTTT 
AGCCTAGAGC AGTTTCTCAA TGAACTCATC CTGTTCCAGA AGGGCCAAAC CAATACCCCA 
CCACCTTTTG AGATCTTCTT TTGCTTTGGA GAAGAATGGC CTGACCTCAA ACCCCGAGAG 
AAGAAGCTCA TTACTGTACA GGTGGTACCT GTCGCAGCCC GGTTGCTGCT GGAGATGTTC 
TCAGGAGAGC TTTCTTGGTC AGCAGACAGC ATTCGGCTGC AGATCTCAAA CCCGGATCTC 
AAAGACCACA TGGTAGAGCA GTTCAAAGAG CTCCATCACA TCTGGCAGTC CCAGCAGCGC 
TTGCAGCCCA TGGTCCAGGC CCCTCCTGTG GCAGGCCTTG ATGCTGGCCA GGGGCCCTGG 
CCCATGCACC CAGTTGGCAT GCAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Irf5 ( XM_006236184.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006236246.1 Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa27090
Clone ID Related Accession (Same CDS sequence)	XM_006236184.3 , XM_006236185.3 , XM_008762765.2
Accession Version	XM_006236184.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1506bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	interferon regulatory factor 5 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236184.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGGCTTCC CTTCAGCTCC AGAGAATGCT ACCAGGCCTG 
AGTATCACAG AACCTGTGCT ACCTGGGCCT CCCATAGCAC CCTATTCCTT ACCCAAAGAA 
GACACCAAGT GGCCACCTGC TCTCCAGCCA CCTGTAGGGC TGGGTCCCCC TCCCCCAGAC 
CCAAATCTCC TGGCCCCTCC CTCTGGAGAT TCTGCTGGCT TTAGGCAGCT TCTCCCTGAG 
GTCCTGGAGC CTGGACCCCT GGCTTCCAAC CAGCCCCCTA CAGAACAACT CTTGCCTGAC 
CTGCTCATCA GCCCCCACAT GCTGCCTTTG ACTGACCTAG AGATCAAGTT CCAGTACCGG 
GGACGTCCAC CGCGGGCCCT CACCATCAGC AACCCACAAG GCTGCAGGCT CTTCTATAGC 
CAGCTAGAGG CTACCCAGGA GCAAGTGGAA CTCTTTGGCC CTGTGACCCT GGAGCAAGTT 
CGCTTCCCTA GCCCAGAGGA TATCCCCAGT GACAAGCAGC GCTTCTATAC GAACCAGCTG 
CTGGATGTCC TGGACCGAGG GCTCATCCTG CAGCTGCAGG GCCAGGACCT GTATGCCATC 
CGTCTGTGCC AGTGTAAGGT GTTCTGGAGT GGGCCCTGTG CCTTGGCCCA TGGTTCCTGC 
CCCAACCCCA TCCAGCGGGA AGTCAAGACA AAGCTCTTTA GCCTAGAGCA GTTTCTCAAT 
GAACTCATCC TGTTCCAGAA GGGCCAAACC AATACCCCAC CACCTTTTGA GATCTTCTTT 
TGCTTTGGAG AAGAATGGCC TGACCTCAAA CCCCGAGAGA AGAAGCTCAT TACTGTACAG 
GTGGTACCTG TCGCAGCCCG GTTGCTGCTG GAGATGTTCT CAGGAGAGCT TTCTTGGTCA 
GCAGACAGCA TTCGGCTGCA GATCTCAAAC CCGGATCTCA AAGACCACAT GGTAGAGCAG 
TTCAAAGAGC TCCATCACAT CTGGCAGTCC CAGCAGCGCT TGCAGCCCAT GGTCCAGGCC 
CCTCCTGTGG CAGGCCTTGA TGCTGGCCAG GGGCCCTGGC CCATGCACCC AGTTGGCATG 
CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006236246.1
CDS	120..1625
Translation	MNQSAPGIPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFQLYYDGPRDMPPQPYKIYEVCSNGPAPTESQPTDDYVLGEEEEEEDEEASLQLQRMLPGLSITEPVLPGPPIAPYSLPKEDTKWPPALQPPVGLGPPPPDPNLLAPPSGDSAGFRQLLPEVLEPGPLASNQPPTEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVTLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSCPNPIQREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVAGLDAGQGPWPMHPVGMQ

Target ORF information:

RefSeq Version	XM_006236184.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006236184.3

ORF Insert Sequence:

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGGCTTCC CTTCAGCTCC AGAGAATGCT ACCAGGCCTG 
AGTATCACAG AACCTGTGCT ACCTGGGCCT CCCATAGCAC CCTATTCCTT ACCCAAAGAA 
GACACCAAGT GGCCACCTGC TCTCCAGCCA CCTGTAGGGC TGGGTCCCCC TCCCCCAGAC 
CCAAATCTCC TGGCCCCTCC CTCTGGAGAT TCTGCTGGCT TTAGGCAGCT TCTCCCTGAG 
GTCCTGGAGC CTGGACCCCT GGCTTCCAAC CAGCCCCCTA CAGAACAACT CTTGCCTGAC 
CTGCTCATCA GCCCCCACAT GCTGCCTTTG ACTGACCTAG AGATCAAGTT CCAGTACCGG 
GGACGTCCAC CGCGGGCCCT CACCATCAGC AACCCACAAG GCTGCAGGCT CTTCTATAGC 
CAGCTAGAGG CTACCCAGGA GCAAGTGGAA CTCTTTGGCC CTGTGACCCT GGAGCAAGTT 
CGCTTCCCTA GCCCAGAGGA TATCCCCAGT GACAAGCAGC GCTTCTATAC GAACCAGCTG 
CTGGATGTCC TGGACCGAGG GCTCATCCTG CAGCTGCAGG GCCAGGACCT GTATGCCATC 
CGTCTGTGCC AGTGTAAGGT GTTCTGGAGT GGGCCCTGTG CCTTGGCCCA TGGTTCCTGC 
CCCAACCCCA TCCAGCGGGA AGTCAAGACA AAGCTCTTTA GCCTAGAGCA GTTTCTCAAT 
GAACTCATCC TGTTCCAGAA GGGCCAAACC AATACCCCAC CACCTTTTGA GATCTTCTTT 
TGCTTTGGAG AAGAATGGCC TGACCTCAAA CCCCGAGAGA AGAAGCTCAT TACTGTACAG 
GTGGTACCTG TCGCAGCCCG GTTGCTGCTG GAGATGTTCT CAGGAGAGCT TTCTTGGTCA 
GCAGACAGCA TTCGGCTGCA GATCTCAAAC CCGGATCTCA AAGACCACAT GGTAGAGCAG 
TTCAAAGAGC TCCATCACAT CTGGCAGTCC CAGCAGCGCT TGCAGCCCAT GGTCCAGGCC 
CCTCCTGTGG CAGGCCTTGA TGCTGGCCAG GGGCCCTGGC CCATGCACCC AGTTGGCATG 
CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Irf5 ( XM_006236185.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006236247.1 Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ORa27090
Clone ID Related Accession (Same CDS sequence)	XM_006236184.3 , XM_006236185.3 , XM_008762765.2
Accession Version	XM_006236185.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1506bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	interferon regulatory factor 5 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236185.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGGCTTCC CTTCAGCTCC AGAGAATGCT ACCAGGCCTG 
AGTATCACAG AACCTGTGCT ACCTGGGCCT CCCATAGCAC CCTATTCCTT ACCCAAAGAA 
GACACCAAGT GGCCACCTGC TCTCCAGCCA CCTGTAGGGC TGGGTCCCCC TCCCCCAGAC 
CCAAATCTCC TGGCCCCTCC CTCTGGAGAT TCTGCTGGCT TTAGGCAGCT TCTCCCTGAG 
GTCCTGGAGC CTGGACCCCT GGCTTCCAAC CAGCCCCCTA CAGAACAACT CTTGCCTGAC 
CTGCTCATCA GCCCCCACAT GCTGCCTTTG ACTGACCTAG AGATCAAGTT CCAGTACCGG 
GGACGTCCAC CGCGGGCCCT CACCATCAGC AACCCACAAG GCTGCAGGCT CTTCTATAGC 
CAGCTAGAGG CTACCCAGGA GCAAGTGGAA CTCTTTGGCC CTGTGACCCT GGAGCAAGTT 
CGCTTCCCTA GCCCAGAGGA TATCCCCAGT GACAAGCAGC GCTTCTATAC GAACCAGCTG 
CTGGATGTCC TGGACCGAGG GCTCATCCTG CAGCTGCAGG GCCAGGACCT GTATGCCATC 
CGTCTGTGCC AGTGTAAGGT GTTCTGGAGT GGGCCCTGTG CCTTGGCCCA TGGTTCCTGC 
CCCAACCCCA TCCAGCGGGA AGTCAAGACA AAGCTCTTTA GCCTAGAGCA GTTTCTCAAT 
GAACTCATCC TGTTCCAGAA GGGCCAAACC AATACCCCAC CACCTTTTGA GATCTTCTTT 
TGCTTTGGAG AAGAATGGCC TGACCTCAAA CCCCGAGAGA AGAAGCTCAT TACTGTACAG 
GTGGTACCTG TCGCAGCCCG GTTGCTGCTG GAGATGTTCT CAGGAGAGCT TTCTTGGTCA 
GCAGACAGCA TTCGGCTGCA GATCTCAAAC CCGGATCTCA AAGACCACAT GGTAGAGCAG 
TTCAAAGAGC TCCATCACAT CTGGCAGTCC CAGCAGCGCT TGCAGCCCAT GGTCCAGGCC 
CCTCCTGTGG CAGGCCTTGA TGCTGGCCAG GGGCCCTGGC CCATGCACCC AGTTGGCATG 
CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006236247.1
CDS	1163..2668
Translation	MNQSAPGIPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFQLYYDGPRDMPPQPYKIYEVCSNGPAPTESQPTDDYVLGEEEEEEDEEASLQLQRMLPGLSITEPVLPGPPIAPYSLPKEDTKWPPALQPPVGLGPPPPDPNLLAPPSGDSAGFRQLLPEVLEPGPLASNQPPTEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVTLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSCPNPIQREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVAGLDAGQGPWPMHPVGMQ

Target ORF information:

RefSeq Version	XM_006236185.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006236185.3

ORF Insert Sequence:

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGGCTTCC CTTCAGCTCC AGAGAATGCT ACCAGGCCTG 
AGTATCACAG AACCTGTGCT ACCTGGGCCT CCCATAGCAC CCTATTCCTT ACCCAAAGAA 
GACACCAAGT GGCCACCTGC TCTCCAGCCA CCTGTAGGGC TGGGTCCCCC TCCCCCAGAC 
CCAAATCTCC TGGCCCCTCC CTCTGGAGAT TCTGCTGGCT TTAGGCAGCT TCTCCCTGAG 
GTCCTGGAGC CTGGACCCCT GGCTTCCAAC CAGCCCCCTA CAGAACAACT CTTGCCTGAC 
CTGCTCATCA GCCCCCACAT GCTGCCTTTG ACTGACCTAG AGATCAAGTT CCAGTACCGG 
GGACGTCCAC CGCGGGCCCT CACCATCAGC AACCCACAAG GCTGCAGGCT CTTCTATAGC 
CAGCTAGAGG CTACCCAGGA GCAAGTGGAA CTCTTTGGCC CTGTGACCCT GGAGCAAGTT 
CGCTTCCCTA GCCCAGAGGA TATCCCCAGT GACAAGCAGC GCTTCTATAC GAACCAGCTG 
CTGGATGTCC TGGACCGAGG GCTCATCCTG CAGCTGCAGG GCCAGGACCT GTATGCCATC 
CGTCTGTGCC AGTGTAAGGT GTTCTGGAGT GGGCCCTGTG CCTTGGCCCA TGGTTCCTGC 
CCCAACCCCA TCCAGCGGGA AGTCAAGACA AAGCTCTTTA GCCTAGAGCA GTTTCTCAAT 
GAACTCATCC TGTTCCAGAA GGGCCAAACC AATACCCCAC CACCTTTTGA GATCTTCTTT 
TGCTTTGGAG AAGAATGGCC TGACCTCAAA CCCCGAGAGA AGAAGCTCAT TACTGTACAG 
GTGGTACCTG TCGCAGCCCG GTTGCTGCTG GAGATGTTCT CAGGAGAGCT TTCTTGGTCA 
GCAGACAGCA TTCGGCTGCA GATCTCAAAC CCGGATCTCA AAGACCACAT GGTAGAGCAG 
TTCAAAGAGC TCCATCACAT CTGGCAGTCC CAGCAGCGCT TGCAGCCCAT GGTCCAGGCC 
CCTCCTGTGG CAGGCCTTGA TGCTGGCCAG GGGCCCTGGC CCATGCACCC AGTTGGCATG 
CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Irf5 ( XM_008762765.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008760987.1 Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X5, mRNA.

Price & Availability↑

CloneID	ORa27090
Clone ID Related Accession (Same CDS sequence)	XM_006236184.3 , XM_006236185.3 , XM_008762765.2
Accession Version	XM_008762765.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1506bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	interferon regulatory factor 5 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008762765.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGGCTTCC CTTCAGCTCC AGAGAATGCT ACCAGGCCTG 
AGTATCACAG AACCTGTGCT ACCTGGGCCT CCCATAGCAC CCTATTCCTT ACCCAAAGAA 
GACACCAAGT GGCCACCTGC TCTCCAGCCA CCTGTAGGGC TGGGTCCCCC TCCCCCAGAC 
CCAAATCTCC TGGCCCCTCC CTCTGGAGAT TCTGCTGGCT TTAGGCAGCT TCTCCCTGAG 
GTCCTGGAGC CTGGACCCCT GGCTTCCAAC CAGCCCCCTA CAGAACAACT CTTGCCTGAC 
CTGCTCATCA GCCCCCACAT GCTGCCTTTG ACTGACCTAG AGATCAAGTT CCAGTACCGG 
GGACGTCCAC CGCGGGCCCT CACCATCAGC AACCCACAAG GCTGCAGGCT CTTCTATAGC 
CAGCTAGAGG CTACCCAGGA GCAAGTGGAA CTCTTTGGCC CTGTGACCCT GGAGCAAGTT 
CGCTTCCCTA GCCCAGAGGA TATCCCCAGT GACAAGCAGC GCTTCTATAC GAACCAGCTG 
CTGGATGTCC TGGACCGAGG GCTCATCCTG CAGCTGCAGG GCCAGGACCT GTATGCCATC 
CGTCTGTGCC AGTGTAAGGT GTTCTGGAGT GGGCCCTGTG CCTTGGCCCA TGGTTCCTGC 
CCCAACCCCA TCCAGCGGGA AGTCAAGACA AAGCTCTTTA GCCTAGAGCA GTTTCTCAAT 
GAACTCATCC TGTTCCAGAA GGGCCAAACC AATACCCCAC CACCTTTTGA GATCTTCTTT 
TGCTTTGGAG AAGAATGGCC TGACCTCAAA CCCCGAGAGA AGAAGCTCAT TACTGTACAG 
GTGGTACCTG TCGCAGCCCG GTTGCTGCTG GAGATGTTCT CAGGAGAGCT TTCTTGGTCA 
GCAGACAGCA TTCGGCTGCA GATCTCAAAC CCGGATCTCA AAGACCACAT GGTAGAGCAG 
TTCAAAGAGC TCCATCACAT CTGGCAGTCC CAGCAGCGCT TGCAGCCCAT GGTCCAGGCC 
CCTCCTGTGG CAGGCCTTGA TGCTGGCCAG GGGCCCTGGC CCATGCACCC AGTTGGCATG 
CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008760987.1
CDS	30..1535
Translation	MNQSAPGIPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFQLYYDGPRDMPPQPYKIYEVCSNGPAPTESQPTDDYVLGEEEEEEDEEASLQLQRMLPGLSITEPVLPGPPIAPYSLPKEDTKWPPALQPPVGLGPPPPDPNLLAPPSGDSAGFRQLLPEVLEPGPLASNQPPTEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVTLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSCPNPIQREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVAGLDAGQGPWPMHPVGMQ

Target ORF information:

RefSeq Version	XM_008762765.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus interferon regulatory factor 5 (Irf5), transcript variant X5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008762765.2

ORF Insert Sequence:

ATGAACCAGT CAGCCCCAGG GATTCCCACA CCACCCCGCC GTGTGAGGCT GAAGCCCTGG 
CTGGTGGCCC AGGTGAACAG CTGCCAGTAC CCAGGGCTCC AGTGGGTCAA CGGGGAAAAG 
AAACTCTTCT ATATCCCCTG GCGCCATGCT ACAAGGCACG GTCCCAGCCA GGATGGAGAC 
AACACCATCT TCAAGGCCTG GGCTAAAGAG ACAGGGAAGT ACACGGAGGG CGTGGATGAG 
GCTGACCCAG CCAAATGGAA GGCCAACCTG CGCTGTGCCC TTAACAAAAG CCGTGACTTC 
CAGCTGTACT ATGATGGCCC TCGAGACATG CCACCTCAGC CCTACAAGAT CTACGAGGTC 
TGCTCCAATG GCCCTGCTCC CACAGAGTCC CAGCCCACAG ATGATTACGT TCTGGGAGAA 
GAGGAGGAAG AGGAAGATGA AGAGGCTTCC CTTCAGCTCC AGAGAATGCT ACCAGGCCTG 
AGTATCACAG AACCTGTGCT ACCTGGGCCT CCCATAGCAC CCTATTCCTT ACCCAAAGAA 
GACACCAAGT GGCCACCTGC TCTCCAGCCA CCTGTAGGGC TGGGTCCCCC TCCCCCAGAC 
CCAAATCTCC TGGCCCCTCC CTCTGGAGAT TCTGCTGGCT TTAGGCAGCT TCTCCCTGAG 
GTCCTGGAGC CTGGACCCCT GGCTTCCAAC CAGCCCCCTA CAGAACAACT CTTGCCTGAC 
CTGCTCATCA GCCCCCACAT GCTGCCTTTG ACTGACCTAG AGATCAAGTT CCAGTACCGG 
GGACGTCCAC CGCGGGCCCT CACCATCAGC AACCCACAAG GCTGCAGGCT CTTCTATAGC 
CAGCTAGAGG CTACCCAGGA GCAAGTGGAA CTCTTTGGCC CTGTGACCCT GGAGCAAGTT 
CGCTTCCCTA GCCCAGAGGA TATCCCCAGT GACAAGCAGC GCTTCTATAC GAACCAGCTG 
CTGGATGTCC TGGACCGAGG GCTCATCCTG CAGCTGCAGG GCCAGGACCT GTATGCCATC 
CGTCTGTGCC AGTGTAAGGT GTTCTGGAGT GGGCCCTGTG CCTTGGCCCA TGGTTCCTGC 
CCCAACCCCA TCCAGCGGGA AGTCAAGACA AAGCTCTTTA GCCTAGAGCA GTTTCTCAAT 
GAACTCATCC TGTTCCAGAA GGGCCAAACC AATACCCCAC CACCTTTTGA GATCTTCTTT 
TGCTTTGGAG AAGAATGGCC TGACCTCAAA CCCCGAGAGA AGAAGCTCAT TACTGTACAG 
GTGGTACCTG TCGCAGCCCG GTTGCTGCTG GAGATGTTCT CAGGAGAGCT TTCTTGGTCA 
GCAGACAGCA TTCGGCTGCA GATCTCAAAC CCGGATCTCA AAGACCACAT GGTAGAGCAG 
TTCAAAGAGC TCCATCACAT CTGGCAGTCC CAGCAGCGCT TGCAGCCCAT GGTCCAGGCC 
CCTCCTGTGG CAGGCCTTGA TGCTGGCCAG GGGCCCTGGC CCATGCACCC AGTTGGCATG 
CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

DNA-binding specificities of human transcription factors.
Cell152(1-2)327-39(2013 Jan)
Jolma A,Yan J,Whitington T,Toivonen J,Nitta KR,Rastas P,Morgunova E,Enge M,Taipale M,Wei G,Palin K,Vaquerizas JM,Vincentelli R,Luscombe NM,Hughes TR,Lemaire P,Ukkonen E,Kivioja T,Taipale J

Activation of interferon regulatory factor 5 by site specific phosphorylation.
PloS one7(3)e33098(2012)
Chang Foreman HC,Van Scoy S,Cheng TF,Reich NC

Peroxisomes are signaling platforms for antiviral innate immunity.
Cell141(4)668-81(2010 May)
Dixit E,Boulant S,Zhang Y,Lee AS,Odendall C,Shum B,Hacohen N,Chen ZJ,Whelan SP,Fransen M,Nibert ML,Superti-Furga G,Kagan JC

Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5.
Nature structural & molecular biology15(11)1213-20(2008 Nov)
Chen W,Lam SS,Srinath H,Jiang Z,Correia JJ,Schiffer CA,Fitzgerald KA,Lin K,Royer WE Jr

Virus-induced heterodimer formation between IRF-5 and IRF-7 modulates assembly of the IFNA enhanceosome in vivo and transcriptional activity of IFNA genes.
The Journal of biological chemistry278(19)16630-41(2003 May)
Barnes BJ,Field AE,Pitha-Rowe PM

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Irf5 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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