C1d cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	C1d
Entrez Gene ID	289810
Full Name	C1D nuclear receptor co-repressor
Synonyms	RGD1560600
General protein information	Preferred Names C1D nuclear receptor co-repressor Names nuclear nucleic acid-binding protein C1D nuclear DNA binding protein, pseudogene 1 rCG23324
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 14 Map Location: 14q22

mRNA and Protein(s)

mRNA	Protein	Name
NM_001106021.1	NP_001099491.1	nuclear nucleic acid-binding protein C1D
XM_008770422.1	XP_008768644.1	nuclear nucleic acid-binding protein C1D isoform X1
XM_017599127.1	XP_017454616.1	nuclear nucleic acid-binding protein C1D isoform X1
XM_006251516.3	XP_006251578.1	nuclear nucleic acid-binding protein C1D isoform X1

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	LOC100912037	XP_006240559.1
	LOC700581	XP_001094383.1
Rattus norvegicus (Norway rat)	C1d	NP_001099491.1

Gene Ontology
Bibliography

Related articles in PubMed

An overview of pre-ribosomal RNA processing in eukaryotes.
Henras AK, Plisson-Chastang C, O'Donohue MF, Chakraborty A, Gleizes PE
Wiley interdisciplinary reviews. RNA6(2)225-42(2015 Mar-Apr)

C1D and hMtr4p associate with the human exosome subunit PM/Scl-100 and are involved in pre-rRNA processing.
Schilders G, van Dijk E, Pruijn GJ
Nucleic acids research35(8)2564-72(2007)

cDNA cloning, recombinant expression and characterization of polypetides with exceptional DNA affinity.
Nehls P, Keck T, Greferath R, Spiess E, Glaser T, Rothbarth K, Stammer H, Werner D
Nucleic acids research26(5)1160-6(1998 Mar)

Cloning and characterization of a corepressor and potential component of the nuclear hormone receptor repression complex.
Zamir I, Dawson J, Lavinsky RM, Glass CK, Rosenfeld MG, Lazar MA
Proceedings of the National Academy of Sciences of the United States of America94(26)14400-5(1997 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following C1d gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the C1d cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa00558	NM_001106021.1 Latest version!	Rattus norvegicus C1D nuclear receptor corepressor (C1d), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
ORa00558	XM_006251516.3 Latest version!	Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
ORa00558	XM_008770422.1 Latest version!	Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
ORa00558	XM_017599127.1 Latest version!	Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

C1d ( NM_001106021.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001099491.1 Rattus norvegicus C1D nuclear receptor corepressor (C1d), mRNA.

Price & Availability↑

CloneID	ORa00558
Clone ID Related Accession (Same CDS sequence)	NM_001106021.1 , XM_008770422.1 , XM_017599127.1 , XM_006251516.3
Accession Version	NM_001106021.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 426bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-13
Organism	Rattus norvegicus(Norway rat)
Product	nuclear nucleic acid-binding protein C1D
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473996.1. On or before Oct 4, 2007 this sequence version replaced XM_001058059.1, XM_214099.4. ##Evidence-Data-START## Transcript exon combination :: BC168684.1, FQ229896.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001099491.1
CDS	108..533
Translation	MAGEEMNEDYPVEIHDSLTALESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAAKLDRGAASRFVKNALWEPKPKNTPKVANKGKSKH

Target ORF information:

RefSeq Version	NM_001106021.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus C1D nuclear receptor corepressor (C1d), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001106021.1

ORF Insert Sequence:

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

C1d ( XM_008770422.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008768644.1 Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa00558
Clone ID Related Accession (Same CDS sequence)	NM_001106021.1 , XM_008770422.1 , XM_017599127.1 , XM_006251516.3
Accession Version	XM_008770422.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 426bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	nuclear nucleic acid-binding protein C1D isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008768644.1
CDS	2290..2715
Translation	MAGEEMNEDYPVEIHDSLTALESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAAKLDRGAASRFVKNALWEPKPKNTPKVANKGKSKH

Target ORF information:

RefSeq Version	XM_008770422.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008770422.1

ORF Insert Sequence:

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

C1d ( XM_017599127.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017454616.1 Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa00558
Clone ID Related Accession (Same CDS sequence)	NM_001106021.1 , XM_008770422.1 , XM_017599127.1 , XM_006251516.3
Accession Version	XM_017599127.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 426bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	nuclear nucleic acid-binding protein C1D isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017454616.1
CDS	2247..2672
Translation	MAGEEMNEDYPVEIHDSLTALESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAAKLDRGAASRFVKNALWEPKPKNTPKVANKGKSKH

Target ORF information:

RefSeq Version	XM_017599127.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017599127.1

ORF Insert Sequence:

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

C1d ( XM_006251516.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006251578.1 Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa00558
Clone ID Related Accession (Same CDS sequence)	NM_001106021.1 , XM_008770422.1 , XM_017599127.1 , XM_006251516.3
Accession Version	XM_006251516.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 426bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	nuclear nucleic acid-binding protein C1D isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251516.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006251578.1
CDS	221..646
Translation	MAGEEMNEDYPVEIHDSLTALESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAAKLDRGAASRFVKNALWEPKPKNTPKVANKGKSKH

Target ORF information:

RefSeq Version	XM_006251516.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus C1D nuclear receptor co-repressor (C1d), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006251516.3

ORF Insert Sequence:

ATGGCAGGTG AAGAAATGAA TGAAGACTAT CCCGTAGAAA TTCACGATTC TTTAACAGCT 
CTGGAGAGCT CCCTGGGGGC GGTGGATGAC ATGCTGAAGA CCATGATGTC TGTTTCTAGA 
AATGAGTTGT TGCAGAAGTT GGACCCACTG GAACAAGCAA AGGTGGATTT AGTTTCTGCA 
TATACATTAA ATTCAATGTT TTGGGTTTAC TTGGCAACTC AAGGAGTTAA TCCCAAGGAG 
CATCCAGTGA AGCAGGAGTT GGAAAGAATC CGAGTCTACA TGAACAGAGT TAAAGAAATA 
ACAGACAAGA AGAAGGCTGC CAAGCTGGAC AGAGGGGCCG CGTCGAGATT TGTCAAAAAT 
GCACTCTGGG AACCCAAACC AAAAAACACA CCAAAAGTGG CTAATAAAGG GAAAAGTAAA 
CACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

An overview of pre-ribosomal RNA processing in eukaryotes.
Wiley interdisciplinary reviews. RNA6(2)225-42(2015 Mar-Apr)
Henras AK,Plisson-Chastang C,O'Donohue MF,Chakraborty A,Gleizes PE

C1D and hMtr4p associate with the human exosome subunit PM/Scl-100 and are involved in pre-rRNA processing.
Nucleic acids research35(8)2564-72(2007)
Schilders G,van Dijk E,Pruijn GJ

cDNA cloning, recombinant expression and characterization of polypetides with exceptional DNA affinity.
Nucleic acids research26(5)1160-6(1998 Mar)
Nehls P,Keck T,Greferath R,Spiess E,Glaser T,Rothbarth K,Stammer H,Werner D

Cloning and characterization of a corepressor and potential component of the nuclear hormone receptor repression complex.
Proceedings of the National Academy of Sciences of the United States of America94(26)14400-5(1997 Dec)
Zamir I,Dawson J,Lavinsky RM,Glass CK,Rosenfeld MG,Lazar MA

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C1d cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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