Sdf4 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Sdf4
Entrez Gene ID	155173
Full Name	stromal cell derived factor 4
General protein information	Preferred Names stromal cell derived factor 4 Names 45 kDa calcium-binding protein SDF-4 cab45
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 5 Map Location: 5q36
Summary	mRNA expression increases in response to ethanol [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
NM_130412.2	NP_569096.2	45 kDa calcium-binding protein
XM_006239516.3	XP_006239578.1	45 kDa calcium-binding protein isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	SDF4	NP_057260.2
Bos taurus (cattle)	SDF4	NP_001030452.1
Caenorhabditis elegans (roundworm)	C56C10.9	NP_495338.1
Danio rerio (zebrafish)	sdf4	NP_998252.1
Xenopus tropicalis (tropical clawed frog)	sdf4	NP_001025582.1
Drosophila melanogaster (fruit fly)	CG31475	NP_001262725.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP002810	XP_312103.4
	SDF4	XP_001091232.1
Canis lupus familiaris (dog)	SDF4	XP_536712.3
Mus musculus (house mouse)	Sdf4	NP_035471.1
Gallus gallus (chicken)	SDF4	NP_001006302.1
Rattus norvegicus (Norway rat)	Sdf4	NP_569096.2

Gene Ontology
Bibliography

Related articles in PubMed

Defining the membrane proteome of NK cells.
Ghosh D, Lippert D, Krokhin O, Cortens JP, Wilkins JA
Journal of mass spectrometry : JMS45(1)1-25(2010 Jan)

Cab45b, a Munc18b-interacting partner, regulates exocytosis in pancreatic beta-cells.
Zhang Y, Kang YH, Chang N, Lam PP, Liu Y, Olkkonen VM, Gaisano HY
The Journal of biological chemistry284(31)20840-7(2009 Jul)

Proteomic analysis of human parotid gland exosomes by multidimensional protein identification technology (MudPIT).
Gonzalez-Begne M, Lu B, Han X, Hagen FK, Hand AR, Melvin JE, Yates JR
Journal of proteome research8(3)1304-14(2009 Mar)

The ethanol response gene Cab45 can modulate the impairment elicited by ethanol and ultraviolet in PC12 cells.
Zhu Y, Wang Q, Xu W, Li S
Journal of genetics and genomics = Yi chuan xue bao35(3)153-61(2008 Mar)

A cytosolic splice variant of Cab45 interacts with Munc18b and impacts on amylase secretion by pancreatic acini.
Lam PP, Hyv?rinen K, Kauppi M, Cosen-Binker L, Laitinen S, Ker?nen S, Gaisano HY, Olkkonen VM
Molecular biology of the cell18(7)2473-80(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The results suggest a mechanism for Cab45b action that involves regulating the dynamic association of Munc18b with SNAREs to impact beta-cell granule exocytosis.
Title: Cab45b, a Munc18b-interacting partner, regulates exocytosis in pancreatic beta-cells.

In a yeast two-hybrid screen the EF-hand Ca(2+)-binding protein Cab45 was identified as an interaction partner of Munc18b.
Title: A cytosolic splice variant of Cab45 interacts with Munc18b and impacts on amylase secretion by pancreatic acini.

The following Sdf4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sdf4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa00372	NM_130412.2 Latest version!	Rattus norvegicus stromal cell derived factor 4 (Sdf4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$188.30 $269.00
ORa28972	XM_006239516.3 Latest version!	Rattus norvegicus stromal cell derived factor 4 (Sdf4), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Sdf4 ( NM_130412.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_569096.2 Rattus norvegicus stromal cell derived factor 4 (Sdf4), mRNA.

Price & Availability↑

CloneID	ORa00372
Clone ID Related Accession (Same CDS sequence)	NM_130412.2
Accession Version	NM_130412.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-07-04
Organism	Rattus norvegicus(Norway rat)
Product	45 kDa calcium-binding protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC086996.1. On Oct 26, 2005 this sequence version replaced NM_130412.1. ##Evidence-Data-START## Transcript exon combination :: BC086996.1, FQ218523.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGACTTCGC GGGCGCCCAA CTGCGCTCCC CAGACCCGGC GTATCAGAAA GCCGGGGAGT 
CCCGTGGTCT GGCTGGCGGC AATGACGTCC AGGCAGAGGT CCCTCTGTGG TCTGGCTGCT 
CATGGCCTCT GGTTCTTGGG CCTTGTCCTT CTGATGGATG CAACTGCTAG ACCTGCCAAC 
CACTCATTTT CTCGGGAAAG AGCAGCCAAC AGGGATGAAA ATGAGATCAT ACCCCCAGAC 
CACTTGAATG GGGTGAAGCT GGAGATGGAT GGACACCTCA ATAAGGACTT CCATCAGGAG 
GTTTTCCTGG GAAAGGACAT GGATGGGTTT GATGAGGACT CAGAGCCACG GAGAAGCAGG 
AGGAAGCTAA TGGTCATCTT TTCCAAGGTA GATGTGAACA CTGACCGGAG GATCAGCGCT 
AAGGAGATGC AGCACTGGAT TATGGAGAAA ACAGCAGAGC ACTTCCAGGA GGCTGTCAAG 
GAGAACAAAC TACACTTCAG GGCTGTGGAC CCCGATGGTG ATGGCCATGT GTCCTGGGAT 
GAATATAAAG TGAAGTTTTT GGCAAGCAAA GGCCACAATG AAAGGGAGAT TGCCGATGCC 
ATCAAGAATC ACGAGGAGCT CAAAGTGGAT GAGGAGACAC AGGAAGTCCT TGGGAACCTC 
AGAGATCGCT GGTATCAGGC AGACAATCCT CCTGCAGACC TGCTGCTGAC TGAGGACGAG 
TTCCTGTCAT TCCTTCACCC TGAGCACAGC CGGGGCATGC TCAAGTTCAT GGTCAAAGAG 
ATCGTTCGGG ACTTGGACCA GGATGGTGAT AAGCAGTTGT CTCTGCCTGA GTTCATCTCT 
CTGCCTGTGG GTACTGTTGA GAACCAGCAA GGCCAAGACA TTGACGACAA CTGGGTGAAA 
GACAGGAAGA AAGAGTTTGA GGAACTGATT GATTCTAACC ATGATGGGAT TGTGACCATG 
GAGGAGTTGG AGAACTACAT GGACCCCATG AATGAATACA ATGCCCTCAA TGAAGCAAAA 
CAGATGATTG CCATTGCTGA TGAGAACCAG AATCACCATC TGGAGCCTGA GGAGATCCTC 
AAGTACAGTG AGTTCTTCAC GGGCAGCAAG CTGATGGACT ATGCCCGCAA TGTGCATGAA 
GAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_569096.2
CDS	28..1176
Translation	MTSRAPNCAPQTRRIRKPGSPVVWLAAMTSRQRSLCGLAAHGLWFLGLVLLMDATARPANHSFSRERAANRDENEIIPPDHLNGVKLEMDGHLNKDFHQEVFLGKDMDGFDEDSEPRRSRRKLMVIFSKVDVNTDRRISAKEMQHWIMEKTAEHFQEAVKENKLHFRAVDPDGDGHVSWDEYKVKFLASKGHNEREIADAIKNHEELKVDEETQEVLGNLRDRWYQADNPPADLLLTEDEFLSFLHPEHSRGMLKFMVKEIVRDLDQDGDKQLSLPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTMEELENYMDPMNEYNALNEAKQMIAIADENQNHHLEPEEILKYSEFFTGSKLMDYARNVHEEF

Target ORF information:

RefSeq Version	NM_130412.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus stromal cell derived factor 4 (Sdf4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_130412.2

ORF Insert Sequence:

ATGACTTCGC GGGCGCCCAA CTGCGCTCCC CAGACCCGGC GTATCAGAAA GCCGGGGAGT 
CCCGTGGTCT GGCTGGCGGC AATGACGTCC AGGCAGAGGT CCCTCTGTGG TCTGGCTGCT 
CATGGCCTCT GGTTCTTGGG CCTTGTCCTT CTGATGGATG CAACTGCTAG ACCTGCCAAC 
CACTCATTTT CTCGGGAAAG AGCAGCCAAC AGGGATGAAA ATGAGATCAT ACCCCCAGAC 
CACTTGAATG GGGTGAAGCT GGAGATGGAT GGACACCTCA ATAAGGACTT CCATCAGGAG 
GTTTTCCTGG GAAAGGACAT GGATGGGTTT GATGAGGACT CAGAGCCACG GAGAAGCAGG 
AGGAAGCTAA TGGTCATCTT TTCCAAGGTA GATGTGAACA CTGACCGGAG GATCAGCGCT 
AAGGAGATGC AGCACTGGAT TATGGAGAAA ACAGCAGAGC ACTTCCAGGA GGCTGTCAAG 
GAGAACAAAC TACACTTCAG GGCTGTGGAC CCCGATGGTG ATGGCCATGT GTCCTGGGAT 
GAATATAAAG TGAAGTTTTT GGCAAGCAAA GGCCACAATG AAAGGGAGAT TGCCGATGCC 
ATCAAGAATC ACGAGGAGCT CAAAGTGGAT GAGGAGACAC AGGAAGTCCT TGGGAACCTC 
AGAGATCGCT GGTATCAGGC AGACAATCCT CCTGCAGACC TGCTGCTGAC TGAGGACGAG 
TTCCTGTCAT TCCTTCACCC TGAGCACAGC CGGGGCATGC TCAAGTTCAT GGTCAAAGAG 
ATCGTTCGGG ACTTGGACCA GGATGGTGAT AAGCAGTTGT CTCTGCCTGA GTTCATCTCT 
CTGCCTGTGG GTACTGTTGA GAACCAGCAA GGCCAAGACA TTGACGACAA CTGGGTGAAA 
GACAGGAAGA AAGAGTTTGA GGAACTGATT GATTCTAACC ATGATGGGAT TGTGACCATG 
GAGGAGTTGG AGAACTACAT GGACCCCATG AATGAATACA ATGCCCTCAA TGAAGCAAAA 
CAGATGATTG CCATTGCTGA TGAGAACCAG AATCACCATC TGGAGCCTGA GGAGATCCTC 
AAGTACAGTG AGTTCTTCAC GGGCAGCAAG CTGATGGACT ATGCCCGCAA TGTGCATGAA 
GAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Sdf4 ( XM_006239516.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006239578.1 Rattus norvegicus stromal cell derived factor 4 (Sdf4), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa28972
Clone ID Related Accession (Same CDS sequence)	XM_006239516.3
Accession Version	XM_006239516.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1170bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	45 kDa calcium-binding protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006239516.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTCTGGG CTCTGTTACC GACTGGCGTT GTGACCTCAA CTTGTGGTCC AGCATCTCTG 
CCTCGGTTTC CTCTTTGGAG TCCCGTGGTC TGGCTGGCGG CAATGACGTC CAGGCAGAGG 
TCCCTCTGTG GTCTGGCTGC TCATGGCCTC TGGTTCTTGG GCCTTGTCCT TCTGATGGAT 
GCAACTGCTA GACCTGCCAA CCACTCATTT TCTCGGGAAA GAGCAGCCAA CAGGGATGAA 
AATGAGATCA TACCCCCAGA CCACTTGAAT GGGGTGAAGC TGGAGATGGA TGGACACCTC 
AATAAGGACT TCCATCAGGA GGTTTTCCTG GGAAAGGACA TGGATGGGTT TGATGAGGAC 
TCAGAGCCAC GGAGAAGCAG GAGGAAGCTA ATGGTCATCT TTTCCAAGGT AGATGTGAAC 
ACTGACCGGA GGATCAGCGC TAAGGAGATG CAGCACTGGA TTATGGAGAA AACAGCAGAG 
CACTTCCAGG AGGCTGTCAA GGAGAACAAA CTACACTTCA GGGCTGTGGA CCCCGATGGT 
GATGGCCATG TGTCCTGGGA TGAATATAAA GTGAAGTTTT TGGCAAGCAA AGGCCACAAT 
GAAAGGGAGA TTGCCGATGC CATCAAGAAT CACGAGGAGC TCAAAGTGGA TGAGGAGACA 
CAGGAAGTCC TTGGGAACCT CAGAGATCGC TGGTATCAGG CAGACAATCC TCCTGCAGAC 
CTGCTGCTGA CTGAGGACGA GTTCCTGTCA TTCCTTCACC CTGAGCACAG CCGGGGCATG 
CTCAAGTTCA TGGTCAAAGA GATCGTTCGG GACTTGGACC AGGATGGTGA TAAGCAGTTG 
TCTCTGCCTG AGTTCATCTC TCTGCCTGTG GGTACTGTTG AGAACCAGCA AGGCCAAGAC 
ATTGACGACA ACTGGGTGAA AGACAGGAAG AAAGAGTTTG AGGAACTGAT TGATTCTAAC 
CATGATGGGA TTGTGACCAT GGAGGAGTTG GAGAACTACA TGGACCCCAT GAATGAATAC 
AATGCCCTCA ATGAAGCAAA ACAGATGATT GCCATTGCTG ATGAGAACCA GAATCACCAT 
CTGGAGCCTG AGGAGATCCT CAAGTACAGT GAGTTCTTCA CGGGCAGCAA GCTGATGGAC 
TATGCCCGCA ATGTGCATGA AGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006239578.1
CDS	55..1224
Translation	MLWALLPTGVVTSTCGPASLPRFPLWSPVVWLAAMTSRQRSLCGLAAHGLWFLGLVLLMDATARPANHSFSRERAANRDENEIIPPDHLNGVKLEMDGHLNKDFHQEVFLGKDMDGFDEDSEPRRSRRKLMVIFSKVDVNTDRRISAKEMQHWIMEKTAEHFQEAVKENKLHFRAVDPDGDGHVSWDEYKVKFLASKGHNEREIADAIKNHEELKVDEETQEVLGNLRDRWYQADNPPADLLLTEDEFLSFLHPEHSRGMLKFMVKEIVRDLDQDGDKQLSLPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTMEELENYMDPMNEYNALNEAKQMIAIADENQNHHLEPEEILKYSEFFTGSKLMDYARNVHEEF

Target ORF information:

RefSeq Version	XM_006239516.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus stromal cell derived factor 4 (Sdf4), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006239516.3

ORF Insert Sequence:

ATGCTCTGGG CTCTGTTACC GACTGGCGTT GTGACCTCAA CTTGTGGTCC AGCATCTCTG 
CCTCGGTTTC CTCTTTGGAG TCCCGTGGTC TGGCTGGCGG CAATGACGTC CAGGCAGAGG 
TCCCTCTGTG GTCTGGCTGC TCATGGCCTC TGGTTCTTGG GCCTTGTCCT TCTGATGGAT 
GCAACTGCTA GACCTGCCAA CCACTCATTT TCTCGGGAAA GAGCAGCCAA CAGGGATGAA 
AATGAGATCA TACCCCCAGA CCACTTGAAT GGGGTGAAGC TGGAGATGGA TGGACACCTC 
AATAAGGACT TCCATCAGGA GGTTTTCCTG GGAAAGGACA TGGATGGGTT TGATGAGGAC 
TCAGAGCCAC GGAGAAGCAG GAGGAAGCTA ATGGTCATCT TTTCCAAGGT AGATGTGAAC 
ACTGACCGGA GGATCAGCGC TAAGGAGATG CAGCACTGGA TTATGGAGAA AACAGCAGAG 
CACTTCCAGG AGGCTGTCAA GGAGAACAAA CTACACTTCA GGGCTGTGGA CCCCGATGGT 
GATGGCCATG TGTCCTGGGA TGAATATAAA GTGAAGTTTT TGGCAAGCAA AGGCCACAAT 
GAAAGGGAGA TTGCCGATGC CATCAAGAAT CACGAGGAGC TCAAAGTGGA TGAGGAGACA 
CAGGAAGTCC TTGGGAACCT CAGAGATCGC TGGTATCAGG CAGACAATCC TCCTGCAGAC 
CTGCTGCTGA CTGAGGACGA GTTCCTGTCA TTCCTTCACC CTGAGCACAG CCGGGGCATG 
CTCAAGTTCA TGGTCAAAGA GATCGTTCGG GACTTGGACC AGGATGGTGA TAAGCAGTTG 
TCTCTGCCTG AGTTCATCTC TCTGCCTGTG GGTACTGTTG AGAACCAGCA AGGCCAAGAC 
ATTGACGACA ACTGGGTGAA AGACAGGAAG AAAGAGTTTG AGGAACTGAT TGATTCTAAC 
CATGATGGGA TTGTGACCAT GGAGGAGTTG GAGAACTACA TGGACCCCAT GAATGAATAC 
AATGCCCTCA ATGAAGCAAA ACAGATGATT GCCATTGCTG ATGAGAACCA GAATCACCAT 
CTGGAGCCTG AGGAGATCCT CAAGTACAGT GAGTTCTTCA CGGGCAGCAA GCTGATGGAC 
TATGCCCGCA ATGTGCATGA AGAGTTCTGA