Ppfia3 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ppfia3
Entrez Gene ID	140591
Full Name	PTPRF interacting protein alpha 3
General protein information	Preferred Names PTPRF interacting protein alpha 3 Names liprin-alpha-3 protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 1 Map Location: 1q22
Summary	may play a role in integrating active zone proteins and synaptic vesicles [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
XM_017588704.1	XP_017444193.1	liprin-alpha-3 isoform X1
NM_001270985.2	NP_001257914.1	liprin-alpha-3

Pathways from BioSystems

Homologies

Bos taurus (cattle)	PPFIA3	XP_005219545.1
Pan troglodytes (chimpanzee)	PPFIA3	XP_513009.3
Homo sapiens (human)	PPFIA3	NP_003651.1
Mus musculus (house mouse)	Ppfia3	NP_084017.2
Danio rerio (zebrafish)	ppfia3	XP_005164030.1
Xenopus tropicalis (tropical clawed frog)	ppfia3	XP_002934675.2
Canis lupus familiaris (dog)	PPFIA3	XP_005616919.1
Rattus norvegicus (Norway rat)	Ppfia3	NP_001257914.1

Gene Ontology
Bibliography

Related articles in PubMed

Liprin ?3: a putative estrogen regulated acrosomal protein.
Joshi CS, Suryawanshi AR, Khan SA, Balasinor NH, Khole VV
Histochemistry and cell biology139(4)535-48(2013 Apr)

Analyses of the spatiotemporal expression and subcellular localization of liprin-? proteins.
Z?rner M, Mittelstaedt T, tom Dieck S, Becker A, Schoch S
The Journal of comparative neurology519(15)3019-39(2011 Oct)

Genomic definition of RIM proteins: evolutionary amplification of a family of synaptic regulatory proteins.
Wang Y, S?dhof TC
Genomics81(2)126-37(2003 Feb)

Interaction between GRIP and liprin-alpha/SYD2 is required for AMPA receptor targeting.
Wyszynski M, Kim E, Dunah AW, Passafaro M, Valtschanoff JG, Serra-Pag?s C, Streuli M, Weinberg RJ, Sheng M
Neuron34(1)39-52(2002 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

study reports the presence of Liprin alpha3 in testicular and epididymal tissue as well as in sperm acrosome and describes its immunochemical characterization
Title: Liprin ?3: a putative estrogen regulated acrosomal protein.

The following Ppfia3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ppfia3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa56328	XM_017588704.1 Latest version!	Rattus norvegicus PTPRF interacting protein alpha 3 (Ppfia3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00
ORa10029	NM_001270985.2 Latest version!	Rattus norvegicus PTPRF interacting protein alpha 3 (Ppfia3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$643.30 $919.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ppfia3 ( XM_017588704.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017444193.1 Rattus norvegicus PTPRF interacting protein alpha 3 (Ppfia3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa56328
Clone ID Related Accession (Same CDS sequence)	XM_017588704.1
Accession Version	XM_017588704.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3552bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	liprin-alpha-3 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGTGCG AGGTGATGCC TACCATCAGC GAGGATGGCC GGCGGGGCTC GGCGCTGGGC 
CCGGACGAGG CCGGCGGCGA GCTGGAGCGC CTCATGGTCA CGATGCTCAC GGAGCGCGAG 
CGCCTGCTGG AGACGCTGCG AGAGGCGCAG GACGGGTTGG CGACAGCGCA GCTACGACTG 
CGCGAGCTCG GCCACGAGAA GGACTCGCTG CAGCGGCAGC TCAGCATTGC TCTGCCTCAG 
GAGTTTGCGG CTCTGACGAA GGAGCTTAAC TTATGTCGGG AACAGCTTCT GGAGAGGGAA 
GAAGAAATCG CAGAGCTGAA GGCGGAGCGA AACAACACCC GGCTACTTCT GGAACACCTC 
GAGTGCCTAG TGTCCAGGCA CGAGCGTTCC CTACGAATGA CTGTGGTGAA ACGCCAAGCC 
CAATCTCCTG GAGGAGTCTC CTCTGAGGTG GAAGTGCTCA AGGCTCTAAA ATCCCTCTTT 
GAGCACCACA AGGCCCTGGA TGAGAAGGTC CGGGAAAGAT TGCGGATGGC ACTGGAGAGG 
GTAGCAGTGC TCGAGGAGGA GCTGGAACTG AGCAATCAGG AGGCCCTGAA CCTTCGAGAC 
CAGCTATCTA GAAGGCGGTC AGGACTGGAG GAGCCGGGCA AGGATGGGGA TGGACAGACC 
CTTGCCAATG GCCTGGGTCC CGTTGGAGAA TCCAGCCGGC GCACGGCAGA GCTGGAGGAG 
GCACTGGAGC GGCAGCGTGC AGAGGTGTGC CAGCTGAGGG AGCGCCTGGC GGTGCTGTGC 
CGTCAGATGA GCCAGCTGGA GGAGGAGCTG GGCACTGCTC ACCGCGAGCT GGGTAAGGCG 
GAGGAAGCTA ACTCCAAGCT GCAGCGCGAC CTCAAGGAGG CCCTGGCTCA GCGGGAAGAT 
ATGGAAGAAC GCATCACCAC ACTGGAAAAG CGCTATCTGA GTGCCCAGCG TGAGGCCACA 
TCTCTACATG ATGCCAACGA TAAGCTGGAG AATGAGCTGG CCAGCAAAGA GTCCCTGTAC 
AGACAGAGTG AAGAGAAGAG CCGTCAGCTG GCCGAGTGGC TGGATGACGC CAAGCAGAAG 
CTGCAGCAGA CCCTGCAGAA GGCAGAGACC TTGCCTGAGA TTGAGGCTCA GCTGGCACAG 
AGAGTGGCTG CTCTGAACAA GGCTGAGGAA CGCCATGGGA ACTTTGAGGA GAGGCTTCGG 
CAGCTGGAGG CACAGCTGGA GGAGAAGAAC CAGGAGCTGC AGAGGGCCCG GCAGAGGGAG 
AAGATGAACG ATGACCACAA TAAACGACTA TCAGAAACGG TGGACAAGCT GCTAAGTGAA 
TCCAATGAAC GGTTACAGCT TCACCTCAAG GAACGTATGG GGGCACTGGA GGAGAAGAAC 
TCACTGAGTG AGGAGATTGC TAACATGAAG AAGCTTCAAG ATGAGCTGCT CCTGAATAAG 
GAGCAGCTCT TGGCTGAGAT GGAACGGATG CAGATGGAGA TCGACCAGCT ACGGGGGAGG 
CCGCCCTCCT ATTCCAGGTC CCTCCCTGGC AGTGCCCTGG AGCTCCGGTA CTCCCAGGCA 
CCAACCTTAC CTTCTGGTGC CCCTCTGGAT CCTTATGGGG CAGGCAGTGG CCGGGCAGGC 
AAGAGGGGCC GCTGGTCGGG GGCCAAGGAC GAGTCTTCCA AGGACTGGGA CCGGTCTACC 
CCTGCTGGAT CCATTCCACC CCCTTTCCCT GGAGAGCTAG ATGGCTCAGA TGAGGAGGAG 
ACCGAGGGGA TGTTCGGGGC TGAACTGCTG TCCCCCAGTG GGCAAGCTGA TGTGCAGACA 
CTGGCCATCA TGCTCCAGGA GCAATTGGAA GCCATCAACA AGGAAATCAA GCTAATTCAA 
GAAGAGAAAG AAACGACAGA GCAGCGTGCA GAGGAGCTGG AGAGCCGGGT GTCCAGTTCT 
GGCCTCGACT CTCTGGGCCG GTACCGCAGC AGCTGTTCAC TACCGCCCTC CCTCACCACC 
TCCACCCTCG CCAGCCCCTC ACCTCCCAGC TCCGGACACT CCACCCCTCG TCTGGCACCT 
CCCAGTCCTG CCCGGGAGAC CGACAAGACC AATCATGTCC CCAAGGACGA AGCCGGTGTT 
CCACGAGGGG AGGGTCCAGC CATTCCAGGA GACACCCCAC CACCCACTCC CCGCTCTGCC 
CGTCTTGAGA GGATGACCCA GGCTTTGGCA CTGCAAGCGG GGTCACTGGA AGATGGGGCA 
CCTCCCCGGG GAAGTGAGAG CACCCCAGAT TCCCTCCACA AAGCCCCCAA GAGGAAGAGC 
ATCAAGTCAT CCATCGGTCG GCTCTTCGGC AAGAAAGAGA AGGGCCGGAT GGGACCCCCA 
GGCCGGGAAA GTGTTTCTCT GGCTGGGACA CCGTCTGATG AAACACTGGC CACTGACCCT 
CTGGGACTAG CCAAGCTGAC TGGTCCAGGA GATAAGGACA GGAGGAACAA GAGAAAGCAT 
GAACTTCTAG AAGAGGCCTG TCGACAAGGC CTGCCTTTTG CTGCCTGGGA CGGCCCCACC 
GTGGTCTCCT GGCTGGAGCT CTGGGTGGGC ATGCCTGCAT GGTACGTGGC CGCCTGCCGG 
GCCAATGTCA AGAGCGGCGC CATCATGGCC AACCTGTCAG ACACGGAGAT CCAGCGGGAA 
ATCGGCATCA GCAATCCACT GCACAGGCTC AAACTGCGCC TTGCCATTCA GGAGATGGTA 
TCACTCACAT CACCCTCTGC TCCTGCCTCC TCACGCACGC CCACAGGAAA CGTGTGGATG 
ACACACGAGG AGATGGAGTC TCTGACTGCA GCTACAAAAC CCATCCTGGC ATATGGCGAC 
ATGAACCACG AGTGGGTGGG CAACGACTGG CTGCCCAGCC TTGGGCTGCC CCAGTACCGA 
AGCTACTTCA TGGAGTCGCT AGTTGATGCT CGGATGTTGG ACCATCTGAA CAAGAAAGAA 
CTGCGAGGCC AACTCAAGAT GGTGGACAGC TTCCACAGGG TTAGTCTGCA CTATGGTATC 
ATGTGCTTGA AACGGCTCAA CTATGACCGG AAGGATCTGG AGCGAAGGAG GGAAGAAAGC 
CAGACCCAAA TCAGAGATGT GATGGTGTGG TCCAACGAAC GGGTCATGGG TTGGGTGTCT 
GGTCTTGGCC TGAAGGAGTT TGCTACGAAT CTCACCGAGA GTGGGGTGCA CGGAGCCCTG 
TTGGCTCTGG ATGAAACCTT CGACTACTCC GACCTGGCCT TGCTTCTACA AATACCTACA 
CAGAATGCAC AAGCTCGGCA ACTGCTGGAG AAAGAATTCA GTAACCTCAT CTCCCTAGGA 
ACAGACAGAC GGCTGGATGA GGACAGTGCC AAGTCCTTCA GCCGCTCCCC ATCCTGGAGG 
AAGATGTTCC GTGAGAAGGA CCTCCGGGGT GTAACCCCCG ATTCAGCCGA GATGTTACCC 
CCCAACTTTC GTTCAGCTGC AGCAGGAGCC CTAGGCTCAC CGGGACTCCC ACTCCGCAAA 
CTGCAGCCTG AAGGCCAGAC TTCTGGGAGT TCACGAGCAG ACGGTGTTTC GGTCCGGACT 
TACTCCTGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017444193.1
CDS	320..3871
Translation	MMCEVMPTISEDGRRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRLRELGHEKDSLQRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPGGVSSEVEVLKALKSLFEHHKALDEKVRERLRMALERVAVLEEELELSNQEALNLRDQLSRRRSGLEEPGKDGDGQTLANGLGPVGESSRRTAELEEALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANSKLQRDLKEALAQREDMEERITTLEKRYLSAQREATSLHDANDKLENELASKESLYRQSEEKSRQLAEWLDDAKQKLQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRARQREKMNDDHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLLNKEQLLAEMERMQMEIDQLRGRPPSYSRSLPGSALELRYSQAPTLPSGAPLDPYGAGSGRAGKRGRWSGAKDESSKDWDRSTPAGSIPPPFPGELDGSDEEETEGMFGAELLSPSGQADVQTLAIMLQEQLEAINKEIKLIQEEKETTEQRAEELESRVSSSGLDSLGRYRSSCSLPPSLTTSTLASPSPPSSGHSTPRLAPPSPARETDKTNHVPKDEAGVPRGEGPAIPGDTPPPTPRSARLERMTQALALQAGSLEDGAPPRGSESTPDSLHKAPKRKSIKSSIGRLFGKKEKGRMGPPGRESVSLAGTPSDETLATDPLGLAKLTGPGDKDRRNKRKHELLEEACRQGLPFAAWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASSRTPTGNVWMTHEEMESLTAATKPILAYGDMNHEWVGNDWLPSLGLPQYRSYFMESLVDARMLDHLNKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKDLERRREESQTQIRDVMVWSNERVMGWVSGLGLKEFATNLTESGVHGALLALDETFDYSDLALLLQIPTQNAQARQLLEKEFSNLISLGTDRRLDEDSAKSFSRSPSWRKMFREKDLRGVTPDSAEMLPPNFRSAAAGALGSPGLPLRKLQPEGQTSGSSRADGVSVRTYSC

Target ORF information:

RefSeq Version	XM_017588704.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus PTPRF interacting protein alpha 3 (Ppfia3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017588704.1

ORF Insert Sequence:

ATGATGTGCG AGGTGATGCC TACCATCAGC GAGGATGGCC GGCGGGGCTC GGCGCTGGGC 
CCGGACGAGG CCGGCGGCGA GCTGGAGCGC CTCATGGTCA CGATGCTCAC GGAGCGCGAG 
CGCCTGCTGG AGACGCTGCG AGAGGCGCAG GACGGGTTGG CGACAGCGCA GCTACGACTG 
CGCGAGCTCG GCCACGAGAA GGACTCGCTG CAGCGGCAGC TCAGCATTGC TCTGCCTCAG 
GAGTTTGCGG CTCTGACGAA GGAGCTTAAC TTATGTCGGG AACAGCTTCT GGAGAGGGAA 
GAAGAAATCG CAGAGCTGAA GGCGGAGCGA AACAACACCC GGCTACTTCT GGAACACCTC 
GAGTGCCTAG TGTCCAGGCA CGAGCGTTCC CTACGAATGA CTGTGGTGAA ACGCCAAGCC 
CAATCTCCTG GAGGAGTCTC CTCTGAGGTG GAAGTGCTCA AGGCTCTAAA ATCCCTCTTT 
GAGCACCACA AGGCCCTGGA TGAGAAGGTC CGGGAAAGAT TGCGGATGGC ACTGGAGAGG 
GTAGCAGTGC TCGAGGAGGA GCTGGAACTG AGCAATCAGG AGGCCCTGAA CCTTCGAGAC 
CAGCTATCTA GAAGGCGGTC AGGACTGGAG GAGCCGGGCA AGGATGGGGA TGGACAGACC 
CTTGCCAATG GCCTGGGTCC CGTTGGAGAA TCCAGCCGGC GCACGGCAGA GCTGGAGGAG 
GCACTGGAGC GGCAGCGTGC AGAGGTGTGC CAGCTGAGGG AGCGCCTGGC GGTGCTGTGC 
CGTCAGATGA GCCAGCTGGA GGAGGAGCTG GGCACTGCTC ACCGCGAGCT GGGTAAGGCG 
GAGGAAGCTA ACTCCAAGCT GCAGCGCGAC CTCAAGGAGG CCCTGGCTCA GCGGGAAGAT 
ATGGAAGAAC GCATCACCAC ACTGGAAAAG CGCTATCTGA GTGCCCAGCG TGAGGCCACA 
TCTCTACATG ATGCCAACGA TAAGCTGGAG AATGAGCTGG CCAGCAAAGA GTCCCTGTAC 
AGACAGAGTG AAGAGAAGAG CCGTCAGCTG GCCGAGTGGC TGGATGACGC CAAGCAGAAG 
CTGCAGCAGA CCCTGCAGAA GGCAGAGACC TTGCCTGAGA TTGAGGCTCA GCTGGCACAG 
AGAGTGGCTG CTCTGAACAA GGCTGAGGAA CGCCATGGGA ACTTTGAGGA GAGGCTTCGG 
CAGCTGGAGG CACAGCTGGA GGAGAAGAAC CAGGAGCTGC AGAGGGCCCG GCAGAGGGAG 
AAGATGAACG ATGACCACAA TAAACGACTA TCAGAAACGG TGGACAAGCT GCTAAGTGAA 
TCCAATGAAC GGTTACAGCT TCACCTCAAG GAACGTATGG GGGCACTGGA GGAGAAGAAC 
TCACTGAGTG AGGAGATTGC TAACATGAAG AAGCTTCAAG ATGAGCTGCT CCTGAATAAG 
GAGCAGCTCT TGGCTGAGAT GGAACGGATG CAGATGGAGA TCGACCAGCT ACGGGGGAGG 
CCGCCCTCCT ATTCCAGGTC CCTCCCTGGC AGTGCCCTGG AGCTCCGGTA CTCCCAGGCA 
CCAACCTTAC CTTCTGGTGC CCCTCTGGAT CCTTATGGGG CAGGCAGTGG CCGGGCAGGC 
AAGAGGGGCC GCTGGTCGGG GGCCAAGGAC GAGTCTTCCA AGGACTGGGA CCGGTCTACC 
CCTGCTGGAT CCATTCCACC CCCTTTCCCT GGAGAGCTAG ATGGCTCAGA TGAGGAGGAG 
ACCGAGGGGA TGTTCGGGGC TGAACTGCTG TCCCCCAGTG GGCAAGCTGA TGTGCAGACA 
CTGGCCATCA TGCTCCAGGA GCAATTGGAA GCCATCAACA AGGAAATCAA GCTAATTCAA 
GAAGAGAAAG AAACGACAGA GCAGCGTGCA GAGGAGCTGG AGAGCCGGGT GTCCAGTTCT 
GGCCTCGACT CTCTGGGCCG GTACCGCAGC AGCTGTTCAC TACCGCCCTC CCTCACCACC 
TCCACCCTCG CCAGCCCCTC ACCTCCCAGC TCCGGACACT CCACCCCTCG TCTGGCACCT 
CCCAGTCCTG CCCGGGAGAC CGACAAGACC AATCATGTCC CCAAGGACGA AGCCGGTGTT 
CCACGAGGGG AGGGTCCAGC CATTCCAGGA GACACCCCAC CACCCACTCC CCGCTCTGCC 
CGTCTTGAGA GGATGACCCA GGCTTTGGCA CTGCAAGCGG GGTCACTGGA AGATGGGGCA 
CCTCCCCGGG GAAGTGAGAG CACCCCAGAT TCCCTCCACA AAGCCCCCAA GAGGAAGAGC 
ATCAAGTCAT CCATCGGTCG GCTCTTCGGC AAGAAAGAGA AGGGCCGGAT GGGACCCCCA 
GGCCGGGAAA GTGTTTCTCT GGCTGGGACA CCGTCTGATG AAACACTGGC CACTGACCCT 
CTGGGACTAG CCAAGCTGAC TGGTCCAGGA GATAAGGACA GGAGGAACAA GAGAAAGCAT 
GAACTTCTAG AAGAGGCCTG TCGACAAGGC CTGCCTTTTG CTGCCTGGGA CGGCCCCACC 
GTGGTCTCCT GGCTGGAGCT CTGGGTGGGC ATGCCTGCAT GGTACGTGGC CGCCTGCCGG 
GCCAATGTCA AGAGCGGCGC CATCATGGCC AACCTGTCAG ACACGGAGAT CCAGCGGGAA 
ATCGGCATCA GCAATCCACT GCACAGGCTC AAACTGCGCC TTGCCATTCA GGAGATGGTA 
TCACTCACAT CACCCTCTGC TCCTGCCTCC TCACGCACGC CCACAGGAAA CGTGTGGATG 
ACACACGAGG AGATGGAGTC TCTGACTGCA GCTACAAAAC CCATCCTGGC ATATGGCGAC 
ATGAACCACG AGTGGGTGGG CAACGACTGG CTGCCCAGCC TTGGGCTGCC CCAGTACCGA 
AGCTACTTCA TGGAGTCGCT AGTTGATGCT CGGATGTTGG ACCATCTGAA CAAGAAAGAA 
CTGCGAGGCC AACTCAAGAT GGTGGACAGC TTCCACAGGG TTAGTCTGCA CTATGGTATC 
ATGTGCTTGA AACGGCTCAA CTATGACCGG AAGGATCTGG AGCGAAGGAG GGAAGAAAGC 
CAGACCCAAA TCAGAGATGT GATGGTGTGG TCCAACGAAC GGGTCATGGG TTGGGTGTCT 
GGTCTTGGCC TGAAGGAGTT TGCTACGAAT CTCACCGAGA GTGGGGTGCA CGGAGCCCTG 
TTGGCTCTGG ATGAAACCTT CGACTACTCC GACCTGGCCT TGCTTCTACA AATACCTACA 
CAGAATGCAC AAGCTCGGCA ACTGCTGGAG AAAGAATTCA GTAACCTCAT CTCCCTAGGA 
ACAGACAGAC GGCTGGATGA GGACAGTGCC AAGTCCTTCA GCCGCTCCCC ATCCTGGAGG 
AAGATGTTCC GTGAGAAGGA CCTCCGGGGT GTAACCCCCG ATTCAGCCGA GATGTTACCC 
CCCAACTTTC GTTCAGCTGC AGCAGGAGCC CTAGGCTCAC CGGGACTCCC ACTCCGCAAA 
CTGCAGCCTG AAGGCCAGAC TTCTGGGAGT TCACGAGCAG ACGGTGTTTC GGTCCGGACT 
TACTCCTGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ppfia3 ( NM_001270985.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001257914.1 Rattus norvegicus PTPRF interacting protein alpha 3 (Ppfia3), mRNA.

Price & Availability↑

CloneID	ORa10029
Clone ID Related Accession (Same CDS sequence)	NM_001270985.2
Accession Version	NM_001270985.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3579bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-21
Organism	Rattus norvegicus(Norway rat)
Product	liprin-alpha-3
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC095435.10. On Sep 19, 2014 this sequence version replaced NM_001270985.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGATGTGCG AGGTGATGCC TACCATCAGC GAGGATGGCC GGCGGGGCTC GGCGCTGGGC 
CCGGACGAGG CCGGCGGCGA GCTGGAGCGC CTCATGGTCA CGATGCTCAC GGAGCGCGAG 
CGCCTGCTGG AGACGCTGCG AGAGGCGCAG GACGGGTTGG CGACAGCGCA GCTACGACTG 
CGCGAGCTCG GCCACGAGAA GGACTCGCTG CAGCGGCAGC TCAGCATTGC TCTGCCTCAG 
GAGTTTGCGG CTCTGACGAA GGAGCTTAAC TTATGTCGGG AACAGCTTCT GGAGAGGGAA 
GAAGAAATCG CAGAGCTGAA GGCGGAGCGA AACAACACCC GGCTACTTCT GGAACACCTC 
GAGTGCCTAG TGTCCAGGCA CGAGCGTTCC CTACGAATGA CTGTGGTGAA ACGCCAAGCC 
CAATCTCCTG GAGGAGTCTC CTCTGAGGTG GAAGTGCTCA AGGCTCTAAA ATCCCTCTTT 
GAGCACCACA AGGCCCTGGA TGAGAAGGTC CGGGAAAGAT TGCGGATGGC ACTGGAGAGG 
GTAGCAGTGC TCGAGGAGGA GCTGGAACTG AGCAATCAGG AGGCCCTGAA CCTTCGAGAC 
CAGCTATCTA GAAGGCGGTC AGGACTGGAG GAGCCGGGCA AGGATGGGGA TGGACAGACC 
CTTGCCAATG GCCTGGGTCC CGTTGGAGAA TCCAGCCGGC GCACGGCAGA GCTGGAGGAG 
GCACTGGAGC GGCAGCGTGC AGAGGTGTGC CAGCTGAGGG AGCGCCTGGC GGTGCTGTGC 
CGTCAGATGA GCCAGCTGGA GGAGGAGCTG GGCACTGCTC ACCGCGAGCT GGGTAAGGCG 
GAGGAAGCTA ACTCCAAGCT GCAGCGCGAC CTCAAGGAGG CCCTGGCTCA GCGGGAAGAT 
ATGGAAGAAC GCATCACCAC ACTGGAAAAG CGCTATCTGA GTGCCCAGCG TGAGGCCACA 
TCTCTACATG ATGCCAACGA TAAGCTGGAG AATGAGCTGG CCAGCAAAGA GTCCCTGTAC 
AGACAGAGTG AAGAGAAGAG CCGTCAGCTG GCCGAGTGGC TGGATGACGC CAAGCAGAAG 
CTGCAGCAGA CCCTGCAGAA GGCAGAGACC TTGCCTGAGA TTGAGGCTCA GCTGGCACAG 
AGAGTGGCTG CTCTGAACAA GGCTGAGGAA CGCCATGGGA ACTTTGAGGA GAGGCTTCGG 
CAGCTGGAGG CACAGCTGGA GGAGAAGAAC CAGGAGCTGC AGAGGGCCCG GCAGAGGGAG 
AAGATGAACG ATGACCACAA TAAACGACTA TCAGAAACGG TGGACAAGCT GCTAAGTGAA 
TCCAATGAAC GGTTACAGCT TCACCTCAAG GAACGTATGG GGGCACTGGA GGAGAAGAAC 
TCACTGAGTG AGGAGATTGC TAACATGAAG AAGCTTCAAG ATGAGCTGCT CCTGAATAAG 
GAGCAGCTCT TGGCTGAGAT GGAACGGATG CAGATGGAGA TCGACCAGCT ACGGGGGAGG 
CCGCCCTCCT ATTCCAGGTC CCTCCCTGGC AGTGCCCTGG AGCTCCGGTA CTCCCAGGCA 
CCAACCTTAC CTTCTGGTGC CCCTCTGGAT CCTTATGGGG CAGGCAGTGG CCGGGCAGGC 
AAGAGGGGCC GCTGGTCGGG GGCCAAGGAC GAGTCTTCCA AGGACTGGGA CCGGTCTACC 
CCTGCTGGAT CCATTCCACC CCCTTTCCCT GGAGAGCTAG ATGGCTCAGA TGAGGAGGAG 
ACCGAGGGGA TGTTCGGGGC TGAACTGCTG TCCCCCAGTG GGCAAGCTGA TGTGCAGACA 
CTGGCCATCA TGCTCCAGGA GCAATTGGAA GCCATCAACA AGGAAATCAA GCTAATTCAA 
GAAGAGAAAG AAACGACAGA GCAGCGTGCA GAGGAGCTGG AGAGCCGGGT GTCCAGTTCT 
GGCCTCGACT CTCTGGGCCG GTACCGCAGC AGCTGTTCAC TACCGCCCTC CCTCACCACC 
TCCACCCTCG CCAGCCCCTC ACCTCCCAGC TCCGGACACT CCACCCCTCG TCTGGCACCT 
CCCAGTCCTG CCCGGGAGAC CGACAAGACC AATCATGTCC CCAAGGACGA AGCCGGTGTT 
CCACGAGGGG AGGGTCCAGC CATTCCAGGA GACACCCCAC CACCCACTCC CCGCTCTGCC 
CGTCTTGAGA GGATGACCCA GGCTTTGGCA CTGCAAGCGG GGTCACTGGA AGATGGGGCA 
CCTCCCCGGG GAAGTGAGAG CACCCCAGAT TCCCTCCACA AAGCCCCCAA GAGGAAGAGC 
ATCAAGTCAT CCATCGGTCG GCTCTTCGGC AAGAAAGAGA AGGGCCGGAT GGGACCCCCA 
GGCCGGGAAA GTGTTTCTCT GGCTGGGACA CCGTCTGATG AAACACTGGC CACTGACCCT 
CTGGGACTAG CCAAGCTGAC TGGTCCAGGA GATAAGGACA GGAGGAACAA GAGAAAGCAT 
GAACTTCTAG AAGAGGCCTG TCGACAAGGC CTGCCTTTTG CTGCCTGGGA CGGCCCCACC 
GTGGTCTCCT GGCTGGAGCT CTGGGTGGGC ATGCCTGCAT GGTACGTGGC CGCCTGCCGG 
GCCAATGTCA AGAGCGGCGC CATCATGGCC AACCTGTCAG ACACGGAGAT CCAGCGGGAA 
ATCGGCATCA GCAATCCACT GCACAGGCTC AAACTGCGCC TTGCCATTCA GGAGATGGTA 
TCACTCACAT CACCCTCTGC TCCTGCCTCC TCACGCACGC CCACAGGAAA CGTGTGGATG 
ACACACGAGG AGATGGAGTC TCTGACTGCA GCTACAAAAC CCGAGACCAA GGAGATCAGC 
TGGGAGCAGA TCCTGGCATA TGGCGACATG AACCACGAGT GGGTGGGCAA CGACTGGCTG 
CCCAGCCTTG GGCTGCCCCA GTACCGAAGC TACTTCATGG AGTCGCTAGT TGATGCTCGG 
ATGTTGGACC ATCTGAACAA GAAAGAACTG CGAGGCCAAC TCAAGATGGT GGACAGCTTC 
CACAGGGTTA GTCTGCACTA TGGTATCATG TGCTTGAAAC GGCTCAACTA TGACCGGAAG 
GATCTGGAGC GAAGGAGGGA AGAAAGCCAG ACCCAAATCA GAGATGTGAT GGTGTGGTCC 
AACGAACGGG TCATGGGTTG GGTGTCTGGT CTTGGCCTGA AGGAGTTTGC TACGAATCTC 
ACCGAGAGTG GGGTGCACGG AGCCCTGTTG GCTCTGGATG AAACCTTCGA CTACTCCGAC 
CTGGCCTTGC TTCTACAAAT ACCTACACAG AATGCACAAG CTCGGCAACT GCTGGAGAAA 
GAATTCAGTA ACCTCATCTC CCTAGGAACA GACAGACGGC TGGATGAGGA CAGTGCCAAG 
TCCTTCAGCC GCTCCCCATC CTGGAGGAAG ATGTTCCGTG AGAAGGACCT CCGGGGTGTA 
ACCCCCGATT CAGCCGAGAT GTTACCCCCC AACTTTCGTT CAGCTGCAGC AGGAGCCCTA 
GGCTCACCGG GACTCCCACT CCGCAAACTG CAGCCTGAAG GCCAGACTTC TGGGAGTTCA 
CGAGCAGACG GTGTTTCGGT CCGGACTTAC TCCTGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001257914.1
CDS	152..3730
Translation	MMCEVMPTISEDGRRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRLRELGHEKDSLQRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPGGVSSEVEVLKALKSLFEHHKALDEKVRERLRMALERVAVLEEELELSNQEALNLRDQLSRRRSGLEEPGKDGDGQTLANGLGPVGESSRRTAELEEALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANSKLQRDLKEALAQREDMEERITTLEKRYLSAQREATSLHDANDKLENELASKESLYRQSEEKSRQLAEWLDDAKQKLQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRARQREKMNDDHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLLNKEQLLAEMERMQMEIDQLRGRPPSYSRSLPGSALELRYSQAPTLPSGAPLDPYGAGSGRAGKRGRWSGAKDESSKDWDRSTPAGSIPPPFPGELDGSDEEETEGMFGAELLSPSGQADVQTLAIMLQEQLEAINKEIKLIQEEKETTEQRAEELESRVSSSGLDSLGRYRSSCSLPPSLTTSTLASPSPPSSGHSTPRLAPPSPARETDKTNHVPKDEAGVPRGEGPAIPGDTPPPTPRSARLERMTQALALQAGSLEDGAPPRGSESTPDSLHKAPKRKSIKSSIGRLFGKKEKGRMGPPGRESVSLAGTPSDETLATDPLGLAKLTGPGDKDRRNKRKHELLEEACRQGLPFAAWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASSRTPTGNVWMTHEEMESLTAATKPETKEISWEQILAYGDMNHEWVGNDWLPSLGLPQYRSYFMESLVDARMLDHLNKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKDLERRREESQTQIRDVMVWSNERVMGWVSGLGLKEFATNLTESGVHGALLALDETFDYSDLALLLQIPTQNAQARQLLEKEFSNLISLGTDRRLDEDSAKSFSRSPSWRKMFREKDLRGVTPDSAEMLPPNFRSAAAGALGSPGLPLRKLQPEGQTSGSSRADGVSVRTYSC

Target ORF information:

RefSeq Version	NM_001270985.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus PTPRF interacting protein alpha 3 (Ppfia3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001270985.2

ORF Insert Sequence:

ATGATGTGCG AGGTGATGCC TACCATCAGC GAGGATGGCC GGCGGGGCTC GGCGCTGGGC 
CCGGACGAGG CCGGCGGCGA GCTGGAGCGC CTCATGGTCA CGATGCTCAC GGAGCGCGAG 
CGCCTGCTGG AGACGCTGCG AGAGGCGCAG GACGGGTTGG CGACAGCGCA GCTACGACTG 
CGCGAGCTCG GCCACGAGAA GGACTCGCTG CAGCGGCAGC TCAGCATTGC TCTGCCTCAG 
GAGTTTGCGG CTCTGACGAA GGAGCTTAAC TTATGTCGGG AACAGCTTCT GGAGAGGGAA 
GAAGAAATCG CAGAGCTGAA GGCGGAGCGA AACAACACCC GGCTACTTCT GGAACACCTC 
GAGTGCCTAG TGTCCAGGCA CGAGCGTTCC CTACGAATGA CTGTGGTGAA ACGCCAAGCC 
CAATCTCCTG GAGGAGTCTC CTCTGAGGTG GAAGTGCTCA AGGCTCTAAA ATCCCTCTTT 
GAGCACCACA AGGCCCTGGA TGAGAAGGTC CGGGAAAGAT TGCGGATGGC ACTGGAGAGG 
GTAGCAGTGC TCGAGGAGGA GCTGGAACTG AGCAATCAGG AGGCCCTGAA CCTTCGAGAC 
CAGCTATCTA GAAGGCGGTC AGGACTGGAG GAGCCGGGCA AGGATGGGGA TGGACAGACC 
CTTGCCAATG GCCTGGGTCC CGTTGGAGAA TCCAGCCGGC GCACGGCAGA GCTGGAGGAG 
GCACTGGAGC GGCAGCGTGC AGAGGTGTGC CAGCTGAGGG AGCGCCTGGC GGTGCTGTGC 
CGTCAGATGA GCCAGCTGGA GGAGGAGCTG GGCACTGCTC ACCGCGAGCT GGGTAAGGCG 
GAGGAAGCTA ACTCCAAGCT GCAGCGCGAC CTCAAGGAGG CCCTGGCTCA GCGGGAAGAT 
ATGGAAGAAC GCATCACCAC ACTGGAAAAG CGCTATCTGA GTGCCCAGCG TGAGGCCACA 
TCTCTACATG ATGCCAACGA TAAGCTGGAG AATGAGCTGG CCAGCAAAGA GTCCCTGTAC 
AGACAGAGTG AAGAGAAGAG CCGTCAGCTG GCCGAGTGGC TGGATGACGC CAAGCAGAAG 
CTGCAGCAGA CCCTGCAGAA GGCAGAGACC TTGCCTGAGA TTGAGGCTCA GCTGGCACAG 
AGAGTGGCTG CTCTGAACAA GGCTGAGGAA CGCCATGGGA ACTTTGAGGA GAGGCTTCGG 
CAGCTGGAGG CACAGCTGGA GGAGAAGAAC CAGGAGCTGC AGAGGGCCCG GCAGAGGGAG 
AAGATGAACG ATGACCACAA TAAACGACTA TCAGAAACGG TGGACAAGCT GCTAAGTGAA 
TCCAATGAAC GGTTACAGCT TCACCTCAAG GAACGTATGG GGGCACTGGA GGAGAAGAAC 
TCACTGAGTG AGGAGATTGC TAACATGAAG AAGCTTCAAG ATGAGCTGCT CCTGAATAAG 
GAGCAGCTCT TGGCTGAGAT GGAACGGATG CAGATGGAGA TCGACCAGCT ACGGGGGAGG 
CCGCCCTCCT ATTCCAGGTC CCTCCCTGGC AGTGCCCTGG AGCTCCGGTA CTCCCAGGCA 
CCAACCTTAC CTTCTGGTGC CCCTCTGGAT CCTTATGGGG CAGGCAGTGG CCGGGCAGGC 
AAGAGGGGCC GCTGGTCGGG GGCCAAGGAC GAGTCTTCCA AGGACTGGGA CCGGTCTACC 
CCTGCTGGAT CCATTCCACC CCCTTTCCCT GGAGAGCTAG ATGGCTCAGA TGAGGAGGAG 
ACCGAGGGGA TGTTCGGGGC TGAACTGCTG TCCCCCAGTG GGCAAGCTGA TGTGCAGACA 
CTGGCCATCA TGCTCCAGGA GCAATTGGAA GCCATCAACA AGGAAATCAA GCTAATTCAA 
GAAGAGAAAG AAACGACAGA GCAGCGTGCA GAGGAGCTGG AGAGCCGGGT GTCCAGTTCT 
GGCCTCGACT CTCTGGGCCG GTACCGCAGC AGCTGTTCAC TACCGCCCTC CCTCACCACC 
TCCACCCTCG CCAGCCCCTC ACCTCCCAGC TCCGGACACT CCACCCCTCG TCTGGCACCT 
CCCAGTCCTG CCCGGGAGAC CGACAAGACC AATCATGTCC CCAAGGACGA AGCCGGTGTT 
CCACGAGGGG AGGGTCCAGC CATTCCAGGA GACACCCCAC CACCCACTCC CCGCTCTGCC 
CGTCTTGAGA GGATGACCCA GGCTTTGGCA CTGCAAGCGG GGTCACTGGA AGATGGGGCA 
CCTCCCCGGG GAAGTGAGAG CACCCCAGAT TCCCTCCACA AAGCCCCCAA GAGGAAGAGC 
ATCAAGTCAT CCATCGGTCG GCTCTTCGGC AAGAAAGAGA AGGGCCGGAT GGGACCCCCA 
GGCCGGGAAA GTGTTTCTCT GGCTGGGACA CCGTCTGATG AAACACTGGC CACTGACCCT 
CTGGGACTAG CCAAGCTGAC TGGTCCAGGA GATAAGGACA GGAGGAACAA GAGAAAGCAT 
GAACTTCTAG AAGAGGCCTG TCGACAAGGC CTGCCTTTTG CTGCCTGGGA CGGCCCCACC 
GTGGTCTCCT GGCTGGAGCT CTGGGTGGGC ATGCCTGCAT GGTACGTGGC CGCCTGCCGG 
GCCAATGTCA AGAGCGGCGC CATCATGGCC AACCTGTCAG ACACGGAGAT CCAGCGGGAA 
ATCGGCATCA GCAATCCACT GCACAGGCTC AAACTGCGCC TTGCCATTCA GGAGATGGTA 
TCACTCACAT CACCCTCTGC TCCTGCCTCC TCACGCACGC CCACAGGAAA CGTGTGGATG 
ACACACGAGG AGATGGAGTC TCTGACTGCA GCTACAAAAC CCGAGACCAA GGAGATCAGC 
TGGGAGCAGA TCCTGGCATA TGGCGACATG AACCACGAGT GGGTGGGCAA CGACTGGCTG 
CCCAGCCTTG GGCTGCCCCA GTACCGAAGC TACTTCATGG AGTCGCTAGT TGATGCTCGG 
ATGTTGGACC ATCTGAACAA GAAAGAACTG CGAGGCCAAC TCAAGATGGT GGACAGCTTC 
CACAGGGTTA GTCTGCACTA TGGTATCATG TGCTTGAAAC GGCTCAACTA TGACCGGAAG 
GATCTGGAGC GAAGGAGGGA AGAAAGCCAG ACCCAAATCA GAGATGTGAT GGTGTGGTCC 
AACGAACGGG TCATGGGTTG GGTGTCTGGT CTTGGCCTGA AGGAGTTTGC TACGAATCTC 
ACCGAGAGTG GGGTGCACGG AGCCCTGTTG GCTCTGGATG AAACCTTCGA CTACTCCGAC 
CTGGCCTTGC TTCTACAAAT ACCTACACAG AATGCACAAG CTCGGCAACT GCTGGAGAAA 
GAATTCAGTA ACCTCATCTC CCTAGGAACA GACAGACGGC TGGATGAGGA CAGTGCCAAG 
TCCTTCAGCC GCTCCCCATC CTGGAGGAAG ATGTTCCGTG AGAAGGACCT CCGGGGTGTA 
ACCCCCGATT CAGCCGAGAT GTTACCCCCC AACTTTCGTT CAGCTGCAGC AGGAGCCCTA 
GGCTCACCGG GACTCCCACT CCGCAAACTG CAGCCTGAAG GCCAGACTTC TGGGAGTTCA 
CGAGCAGACG GTGTTTCGGT CCGGACTTAC TCCTGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Liprin ?3: a putative estrogen regulated acrosomal protein.
Histochemistry and cell biology139(4)535-48(2013 Apr)
Joshi CS,Suryawanshi AR,Khan SA,Balasinor NH,Khole VV

Analyses of the spatiotemporal expression and subcellular localization of liprin-? proteins.
The Journal of comparative neurology519(15)3019-39(2011 Oct)
Z?rner M,Mittelstaedt T,tom Dieck S,Becker A,Schoch S

Genomic definition of RIM proteins: evolutionary amplification of a family of synaptic regulatory proteins.
Genomics81(2)126-37(2003 Feb)
Wang Y,S?dhof TC

Interaction between GRIP and liprin-alpha/SYD2 is required for AMPA receptor targeting.
Neuron34(1)39-52(2002 Mar)
Wyszynski M,Kim E,Dunah AW,Passafaro M,Valtschanoff JG,Serra-Pag?s C,Streuli M,Weinberg RJ,Sheng M

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Ppfia3 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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