Gene Symbol | TRIM5 |
Entrez Gene ID | 503563 |
Full Name | tripartite motif containing 5 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » TRIM5 cDNA ORF clone
Gene Symbol | TRIM5 |
Entrez Gene ID | 503563 |
Full Name | tripartite motif containing 5 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016919889.1 | XP_016775378.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919891.1 | XP_016775380.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919888.1 | XP_016775377.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919895.1 | XP_016775384.1 | tripartite motif-containing protein 5 isoform X3 |
XM_016919889.2 | XP_016775378.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919890.2 | XP_016775379.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919888.2 | XP_016775377.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919891.2 | XP_016775380.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919893.1 | XP_016775382.1 | tripartite motif-containing protein 5 isoform X2 |
XM_024346833.1 | XP_024202601.1 | tripartite motif-containing protein 5 isoform X4 |
XM_016919890.1 | XP_016775379.1 | tripartite motif-containing protein 5 isoform X1 |
XM_016919895.2 | XP_016775384.1 | tripartite motif-containing protein 5 isoform X3 |
NM_001012650.1 | NP_001012668.1 | tripartite motif-containing protein 5 |
XM_016919894.1 | XP_016775383.1 | tripartite motif-containing protein 5 isoform X2 |
Pan troglodytes (chimpanzee) | TRIM5 | NP_001012668.1 |
Bos taurus (cattle) | LOC616948 | NP_001029970.1 |
Bos taurus (cattle) | LOC516599 | XP_002693251.1 |
Mus musculus (house mouse) | Trim12c | NP_783608.3 |
TRIM5 | NP_001028082.1 | |
Mus musculus (house mouse) | Trim5 | XP_997808.2 |
Rattus norvegicus (Norway rat) | Trim5 | NP_001014045.1 |
Homo sapiens (human) | TRIM5 | NP_149023.2 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
All three variable regions of the TRIM5alpha B30.2 domain can contribute to the specificity of retrovirus restriction.
Ohkura S, Yap MW, Sheldon T, Stoye JP
Journal of virology80(17)8554-65(2006 Sep)
Patterns of evolution of host proteins involved in retroviral pathogenesis.
Ortiz M, Bleiber G, Martinez R, Kaessmann H, Telenti A
Retrovirology311(2006 Feb)
High-frequency persistence of an impaired allele of the retroviral defense gene TRIM5alpha in humans.
Sawyer SL, Wu LI, Akey JM, Emerman M, Malik HS
Current biology : CB16(1)95-100(2006 Jan)
Adaptive evolution of primate TRIM5alpha, a gene restricting HIV-1 infection.
Liu HL, Wang YQ, Liao CH, Kuang YQ, Zheng YT, Su B
Gene362109-16(2005 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
SPRY domain of TRIM5alpha showed higher nonsynon/synonymous substitution ratios than the non-SPRY domain, indicating that the adaptive evolution of TRIM5alpha might be a strategy developed in defending retrovirus infection during primate evolution.
Title: Adaptive evolution of primate TRIM5alpha, a gene restricting HIV-1 infection.
TRIM5alpha protein functionally resembled human TRIM5alpha, potently restricting infection by N-tropic murine leukemia virus (N-MLV) and moderately restricting human immunodeficiency virus type 1 (HIV-1) infection
Title: Retrovirus restriction by TRIM5alpha variants from Old World and New World primates.
The following TRIM5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRIM5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00121 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.2 , XM_016919890.2 , XM_016919888.2 , XM_016919891.2 , NM_001012650.1 | |
Accession Version | NM_001012650.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY843506.1. ##Evidence-Data-START## Transcript exon combination :: AY740617.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01120800, SAMN01120804 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001012668.1 |
CDS | 1..1482 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001012650.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc00121 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.2 , XM_016919890.2 , XM_016919888.2 , XM_016919891.2 , NM_001012650.1 | |
Accession Version | XM_016919889.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016919889.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775378.1 |
CDS | 162..1643 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919889.2 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc00121 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.2 , XM_016919890.2 , XM_016919888.2 , XM_016919891.2 , NM_001012650.1 | |
Accession Version | XM_016919890.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016919890.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775379.1 |
CDS | 422..1903 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919890.2 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc00121 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.2 , XM_016919890.2 , XM_016919888.2 , XM_016919891.2 , NM_001012650.1 | |
Accession Version | XM_016919888.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016919888.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775377.1 |
CDS | 299..1780 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919888.2 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc00121 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.2 , XM_016919890.2 , XM_016919888.2 , XM_016919891.2 , NM_001012650.1 | |
Accession Version | XM_016919891.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016919891.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775380.1 |
CDS | 83..1564 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919891.2 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63176 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.1 , XM_016919891.1 , XM_016919888.1 , XM_016919890.1 | |
Accession Version | XM_016919889.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006478.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775378.1 |
CDS | 162..1643 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919889.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63176 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.1 , XM_016919891.1 , XM_016919888.1 , XM_016919890.1 | |
Accession Version | XM_016919891.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006478.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775380.1 |
CDS | 939..2420 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919891.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63176 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.1 , XM_016919891.1 , XM_016919888.1 , XM_016919890.1 | |
Accession Version | XM_016919888.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006478.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775377.1 |
CDS | 299..1780 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919888.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63176 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919889.1 , XM_016919891.1 , XM_016919888.1 , XM_016919890.1 | |
Accession Version | XM_016919890.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006478.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775379.1 |
CDS | 431..1912 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919890.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63177 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919893.1 , XM_016919894.1 | |
Accession Version | XM_016919893.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 981bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775382.1 |
CDS | 299..1279 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919893.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63177 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919893.1 , XM_016919894.1 | |
Accession Version | XM_016919894.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 981bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775383.1 |
CDS | 162..1142 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919894.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63178 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919895.1 , XM_016919895.2 | |
Accession Version | XM_016919895.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 903bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006478.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775384.1 |
CDS | 299..1201 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919895.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc63178 | |
Clone ID Related Accession (Same CDS sequence) | XM_016919895.1 , XM_016919895.2 | |
Accession Version | XM_016919895.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 903bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016919895.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016775384.1 |
CDS | 299..1201 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016919895.2 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc94662 | |
Clone ID Related Accession (Same CDS sequence) | XM_024346833.1 | |
Accession Version | XM_024346833.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 837bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | tripartite motif-containing protein 5 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036890.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024202601.1 |
CDS | 287..1123 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024346833.1 |
1 | ATGGCTTCTG GAATCCTGGT TAATGTAAAG GAGGAGGTGA CCTGCCCCAT CTGCCTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |
All three variable regions of the TRIM5alpha B30.2 domain can contribute to the specificity of retrovirus restriction. |
Patterns of evolution of host proteins involved in retroviral pathogenesis. |
High-frequency persistence of an impaired allele of the retroviral defense gene TRIM5alpha in humans. |
Adaptive evolution of primate TRIM5alpha, a gene restricting HIV-1 infection. |