Gene Symbol | HSPD1 |
Entrez Gene ID | 459852 |
Full Name | heat shock protein family D (Hsp60) member 1 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » HSPD1 cDNA ORF clone
Gene Symbol | HSPD1 |
Entrez Gene ID | 459852 |
Full Name | heat shock protein family D (Hsp60) member 1 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016949340.1 | XP_016804829.1 | 60 kDa heat shock protein, mitochondrial isoform X2 |
XM_009443690.2 | XP_009441965.1 | 60 kDa heat shock protein, mitochondrial isoform X1 |
NM_001280151.1 | NP_001267080.1 | 60 kDa heat shock protein, mitochondrial |
XM_009443691.1 | XP_009441966.1 | 60 kDa heat shock protein, mitochondrial isoform X1 |
XM_009443691.2 | XP_009441966.1 | 60 kDa heat shock protein, mitochondrial isoform X1 |
XM_016949340.2 | XP_016804829.1 | 60 kDa heat shock protein, mitochondrial isoform X2 |
XM_009443692.2 | XP_009441967.1 | 60 kDa heat shock protein, mitochondrial isoform X3 |
HSPD1 | XP_002799053.1 | |
Danio rerio (zebrafish) | hspd1 | NP_851847.1 |
Homo sapiens (human) | HSPD1 | NP_955472.1 |
Gallus gallus (chicken) | HSPD1 | NP_001012934.1 |
Saccharomyces cerevisiae (baker's yeast) | HSP60 | NP_013360.1 |
Schizosaccharomyces pombe (fission yeast) | mcp60 | NP_592894.1 |
Oryza sativa (rice) | Os10g0462900 | NP_001064784.1 |
Pan troglodytes (chimpanzee) | HSPD1 | XP_001169056.1 |
Mus musculus (house mouse) | Hspd1 | NP_034607.3 |
Kluyveromyces lactis | KLLA0F09449g | XP_455510.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_03165 | XP_003716826.1 |
Arabidopsis thaliana (thale cress) | HSP60 | NP_189041.1 |
Oryza sativa (rice) | Os03g0143400 | NP_001048938.1 |
Canis lupus familiaris (dog) | HSPD1 | XP_005640555.1 |
Bos taurus (cattle) | HSPD1 | NP_001160082.1 |
Drosophila melanogaster (fruit fly) | Hsp60 | NP_511115.2 |
Caenorhabditis elegans (roundworm) | hsp-60 | NP_497429.1 |
Rattus norvegicus (Norway rat) | Hspd1 | NP_071565.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004002 | XP_318461.2 |
Eremothecium gossypii | AGOS_AFR155W | NP_985702.2 |
Neurospora crassa | NCU01589 | XP_956500.2 |
Xenopus tropicalis (tropical clawed frog) | hspd1 | NP_001096355.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HSPD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HSPD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00724 | |
Clone ID Related Accession (Same CDS sequence) | NM_001280151.1 | |
Accession Version | NM_001280151.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-10-06 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | 60 kDa heat shock protein, mitochondrial | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305714.1. On or before Jul 22, 2013 this sequence version replaced XM_001169249.2, XM_003949936.1, XM_001169056.3, XM_001169199.3. ##Evidence-Data-START## Transcript exon combination :: AK305714.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001267080.1 |
CDS | 1..1722 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001280151.1 |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc37331 | |
Clone ID Related Accession (Same CDS sequence) | XM_009443690.2 , XM_009443691.1 , XM_009443691.2 | |
Accession Version | XM_009443690.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | 60 kDa heat shock protein, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036881.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009443690.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009441965.1 |
CDS | 223..1944 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009443690.2 |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc37331 | |
Clone ID Related Accession (Same CDS sequence) | XM_009443690.2 , XM_009443691.1 , XM_009443691.2 | |
Accession Version | XM_009443691.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | 60 kDa heat shock protein, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006470.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009441966.1 |
CDS | 133..1854 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009443691.1 |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc37331 | |
Clone ID Related Accession (Same CDS sequence) | XM_009443690.2 , XM_009443691.1 , XM_009443691.2 | |
Accession Version | XM_009443691.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | 60 kDa heat shock protein, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036881.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_009443691.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009441966.1 |
CDS | 188..1909 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009443691.2 |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc37332 | |
Clone ID Related Accession (Same CDS sequence) | XM_009443692.2 | |
Accession Version | XM_009443692.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1626bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | 60 kDa heat shock protein, mitochondrial isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006470.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009443692.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009441967.1 |
CDS | 223..1848 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009443692.2 |
1 | ATGCTTCGGT TACCCACAGT CTTTCGCCAG ATGAGACCGG TGTCCAGGGT ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc79738 | |
Clone ID Related Accession (Same CDS sequence) | XM_016949340.1 , XM_016949340.2 | |
Accession Version | XM_016949340.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1653bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | 60 kDa heat shock protein, mitochondrial isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006470.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATCTTTT TGCTTCCATC CCCAGAAATG CTTCGGTTAC CCACAGTCTT TCGCCAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016804829.1 |
CDS | 883..2535 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016949340.1 |
1 | ATGATCTTTT TGCTTCCATC CCCAGAAATG CTTCGGTTAC CCACAGTCTT TCGCCAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc79738 | |
Clone ID Related Accession (Same CDS sequence) | XM_016949340.1 , XM_016949340.2 | |
Accession Version | XM_016949340.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1653bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | 60 kDa heat shock protein, mitochondrial isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036881.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016949340.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATCTTTT TGCTTCCATC CCCAGAAATG CTTCGGTTAC CCACAGTCTT TCGCCAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016804829.1 |
CDS | 881..2533 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016949340.2 |
1 | ATGATCTTTT TGCTTCCATC CCCAGAAATG CTTCGGTTAC CCACAGTCTT TCGCCAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |