Gene Symbol | BPI |
Entrez Gene ID | 458238 |
Full Name | bactericidal/permeability-increasing protein |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » BPI cDNA ORF clone
Gene Symbol | BPI |
Entrez Gene ID | 458238 |
Full Name | bactericidal/permeability-increasing protein |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016937138.1 | XP_016792627.1 | bactericidal permeability-increasing protein isoform X1 |
XM_016937139.1 | XP_016792628.1 | bactericidal permeability-increasing protein isoform X2 |
NM_001319873.1 | NP_001306802.1 | bactericidal permeability-increasing protein |
XM_016937138.2 | XP_016792627.1 | bactericidal permeability-increasing protein isoform X1 |
XM_016937139.2 | XP_016792628.1 | bactericidal permeability-increasing protein isoform X2 |
Canis lupus familiaris (dog) | BPI | XP_534417.2 |
Danio rerio (zebrafish) | bpifcl | XP_001342762.2 |
Gallus gallus (chicken) | BPI | XP_417465.4 |
Rattus norvegicus (Norway rat) | Bpi | NP_001004079.1 |
Homo sapiens (human) | BPI | NP_001716.2 |
Pan troglodytes (chimpanzee) | BPI | XP_514637.4 |
LOC706221 | XP_001094576.1 | |
Mus musculus (house mouse) | Bpi | NP_808518.1 |
Bos taurus (cattle) | BPI | NP_776320.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BPI gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BPI cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc36174 | |
Clone ID Related Accession (Same CDS sequence) | NM_001319873.1 | |
Accession Version | NM_001319873.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-02-24 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | bactericidal permeability-increasing protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK306943.1. ##Evidence-Data-START## CDS exon combination :: AK306943.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMN01120804, SAMN02045701 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTTGCTGT GGGAGCCAGC TCATGGTCCA TCTTCTTTCT CTCTAGTAAT GACCAAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001306802.1 |
CDS | 1375..2097 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001319873.1 |
1 | ATGTTGCTGT GGGAGCCAGC TCATGGTCCA TCTTCTTTCT CTCTAGTAAT GACCAAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc76550 | |
Clone ID Related Accession (Same CDS sequence) | XM_016937138.1 , XM_016937138.2 | |
Accession Version | XM_016937138.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | bactericidal permeability-increasing protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006487.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGAGAGA ACATGGCCAG GGGCCCTTGC AACGCGCCGA GATGGGCGTC CCTGCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016792627.1 |
CDS | 117..1580 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016937138.1 |
1 | ATGAGAGAGA ACATGGCCAG GGGCCCTTGC AACGCGCCGA GATGGGCGTC CCTGCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc76550 | |
Clone ID Related Accession (Same CDS sequence) | XM_016937138.1 , XM_016937138.2 | |
Accession Version | XM_016937138.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | bactericidal permeability-increasing protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036899.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016937138.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGAGAGA ACATGGCCAG GGGCCCTTGC AACGCGCCGA GATGGGCGTC CCTGCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016792627.1 |
CDS | 116..1579 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016937138.2 |
1 | ATGAGAGAGA ACATGGCCAG GGGCCCTTGC AACGCGCCGA GATGGGCGTC CCTGCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc76551 | |
Clone ID Related Accession (Same CDS sequence) | XM_016937139.1 , XM_016937139.2 | |
Accession Version | XM_016937139.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1731bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | bactericidal permeability-increasing protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006487.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTGCT TAGGGAGGGG AACCAATCTA CACACACACA TACACACACG CACGCCCGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016792628.1 |
CDS | 16..1746 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016937139.1 |
1 | ATGGGGTGCT TAGGGAGGGG AACCAATCTA CACACACACA TACACACACG CACGCCCGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc76551 | |
Clone ID Related Accession (Same CDS sequence) | XM_016937139.1 , XM_016937139.2 | |
Accession Version | XM_016937139.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1731bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | bactericidal permeability-increasing protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036899.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016937139.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTGCT TAGGGAGGGG AACCAATCTA CACACACACA TACACACACG CACGCCCGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016792628.1 |
CDS | 15..1745 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016937139.2 |
1 | ATGGGGTGCT TAGGGAGGGG AACCAATCTA CACACACACA TACACACACG CACGCCCGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |