Gene Symbol | VPS33A |
Entrez Gene ID | 452326 |
Full Name | VPS33A, CORVET/HOPS core subunit |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » VPS33A cDNA ORF clone
Gene Symbol | VPS33A |
Entrez Gene ID | 452326 |
Full Name | VPS33A, CORVET/HOPS core subunit |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016922620.1 | XP_016778109.1 | vacuolar protein sorting-associated protein 33A isoform X1 |
XM_016922620.2 | XP_016778109.1 | vacuolar protein sorting-associated protein 33A isoform X1 |
XM_009426454.2 | XP_009424729.1 | vacuolar protein sorting-associated protein 33A isoform X2 |
XM_009426455.2 | XP_009424730.1 | vacuolar protein sorting-associated protein 33A isoform X3 |
NM_001280487.1 | NP_001267416.1 | vacuolar protein sorting-associated protein 33A |
XM_009426454.3 | XP_009424729.1 | vacuolar protein sorting-associated protein 33A isoform X2 |
XM_009426455.3 | XP_009424730.1 | vacuolar protein sorting-associated protein 33A isoform X3 |
Danio rerio (zebrafish) | vps33a | NP_001093443.1 |
Drosophila melanogaster (fruit fly) | car | NP_001259707.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_09914 | XP_003710012.1 |
Arabidopsis thaliana (thale cress) | ATVPS33 | NP_001154679.1 |
Oryza sativa (rice) | Os04g0223000 | NP_001052270.1 |
Homo sapiens (human) | VPS33A | NP_075067.2 |
Pan troglodytes (chimpanzee) | VPS33A | XP_001167604.1 |
VPS33A | XP_001098683.1 | |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003203 | XP_312907.4 |
Canis lupus familiaris (dog) | VPS33A | XP_534660.2 |
Gallus gallus (chicken) | VPS33A | XP_415153.1 |
Bos taurus (cattle) | VPS33A | NP_001039514.1 |
Rattus norvegicus (Norway rat) | Vps33a | NP_075250.2 |
Neurospora crassa | NCU09121 | XP_958893.1 |
Mus musculus (house mouse) | Vps33a | NP_084205.3 |
Schizosaccharomyces pombe (fission yeast) | vps33 | NP_596210.1 |
Xenopus tropicalis (tropical clawed frog) | vps33a | NP_001016935.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following VPS33A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS33A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00904 | |
Clone ID Related Accession (Same CDS sequence) | NM_001280487.1 | |
Accession Version | NM_001280487.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1791bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-28 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuolar protein sorting-associated protein 33A | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305795.1. On Jul 22, 2013 this sequence version replaced XM_001167604.1. ##Evidence-Data-START## Transcript exon combination :: AK305795.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01120800, SAMN01120804 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGCTC ACCTGTCCTA CGGACGAGTG AACCTAAACG TGTTGCGCGA GGCGGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001267416.1 |
CDS | 26..1816 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001280487.1 |
1 | ATGGCGGCTC ACCTGTCCTA CGGACGAGTG AACCTAAACG TGTTGCGCGA GGCGGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31100 | |
Clone ID Related Accession (Same CDS sequence) | XM_009426454.2 , XM_009426454.3 | |
Accession Version | XM_009426454.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1605bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuolar protein sorting-associated protein 33A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006479.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009426454.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCACAC TTAAAGGAAA TCGTTTGCCG GCAGCTGATG TCAAGAATAT AATTTTTTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009424729.1 |
CDS | 284..1888 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009426454.2 |
1 | ATGTTCACAC TTAAAGGAAA TCGTTTGCCG GCAGCTGATG TCAAGAATAT AATTTTTTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31100 | |
Clone ID Related Accession (Same CDS sequence) | XM_009426454.2 , XM_009426454.3 | |
Accession Version | XM_009426454.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1605bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuolar protein sorting-associated protein 33A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_009426454.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCACAC TTAAAGGAAA TCGTTTGCCG GCAGCTGATG TCAAGAATAT AATTTTTTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009424729.1 |
CDS | 333..1937 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009426454.3 |
1 | ATGTTCACAC TTAAAGGAAA TCGTTTGCCG GCAGCTGATG TCAAGAATAT AATTTTTTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31101 | |
Clone ID Related Accession (Same CDS sequence) | XM_009426455.2 , XM_009426455.3 | |
Accession Version | XM_009426455.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1470bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuolar protein sorting-associated protein 33A isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006479.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009426455.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTC ACCTGTCCTA CGGACGAGTG AACCTAAACG TGTTGCGCGA GGCGGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009424730.1 |
CDS | 109..1578 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009426455.2 |
1 | ATGGCGGCTC ACCTGTCCTA CGGACGAGTG AACCTAAACG TGTTGCGCGA GGCGGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31101 | |
Clone ID Related Accession (Same CDS sequence) | XM_009426455.2 , XM_009426455.3 | |
Accession Version | XM_009426455.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1470bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuolar protein sorting-associated protein 33A isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_009426455.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTC ACCTGTCCTA CGGACGAGTG AACCTAAACG TGTTGCGCGA GGCGGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009424730.1 |
CDS | 401..1870 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009426455.3 |
1 | ATGGCGGCTC ACCTGTCCTA CGGACGAGTG AACCTAAACG TGTTGCGCGA GGCGGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc65289 | |
Clone ID Related Accession (Same CDS sequence) | XM_016922620.1 , XM_016922620.2 | |
Accession Version | XM_016922620.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1701bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuolar protein sorting-associated protein 33A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006479.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGTCAG AGGCAATAGT TTGGGATGAA TACCTAACTG GACCCTTTGG CCTGATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778109.1 |
CDS | 317..2017 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922620.1 |
1 | ATGTGGTCAG AGGCAATAGT TTGGGATGAA TACCTAACTG GACCCTTTGG CCTGATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc65289 | |
Clone ID Related Accession (Same CDS sequence) | XM_016922620.1 , XM_016922620.2 | |
Accession Version | XM_016922620.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1701bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuolar protein sorting-associated protein 33A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016922620.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGTCAG AGGCAATAGT TTGGGATGAA TACCTAACTG GACCCTTTGG CCTGATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778109.1 |
CDS | 317..2017 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922620.2 |
1 | ATGTGGTCAG AGGCAATAGT TTGGGATGAA TACCTAACTG GACCCTTTGG CCTGATTGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |