Gene Symbol | RNF4 |
Entrez Gene ID | 100608453 |
Full Name | ring finger protein 4 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » RNF4 cDNA ORF clone
Gene Symbol | RNF4 |
Entrez Gene ID | 100608453 |
Full Name | ring finger protein 4 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
NM_001251909.2 | NP_001238838.2 | E3 ubiquitin-protein ligase RNF4 |
XM_009447228.3 | XP_009445503.2 | E3 ubiquitin-protein ligase RNF4 isoform X1 |
NM_001251909.1 | NP_001238838.1 | E3 ubiquitin-protein ligase RNF4 |
XM_009447228.2 | XP_009445503.2 | E3 ubiquitin-protein ligase RNF4 isoform X1 |
NM_001251909.3 | NP_001238838.2 | E3 ubiquitin-protein ligase RNF4 |
Homo sapiens (human) | RNF4 | NP_001171938.1 |
Pan troglodytes (chimpanzee) | RNF4 | NP_001238838.1 |
Danio rerio (zebrafish) | im:7142942 | XP_683428.1 |
Xenopus tropicalis (tropical clawed frog) | rnf4 | NP_001016554.1 |
Canis lupus familiaris (dog) | RNF4 | XP_853173.1 |
Mus musculus (house mouse) | Rnf4 | NP_035408.1 |
Bos taurus (cattle) | RNF4 | NP_001040054.1 |
Rattus norvegicus (Norway rat) | Rnf4 | NP_062055.1 |
Gallus gallus (chicken) | RNF4 | NP_001012907.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following RNF4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RNF4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00665 | |
Clone ID Related Accession (Same CDS sequence) | NM_001251909.1 | |
Accession Version | NM_001251909.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2014-10-11 | |
Organism | Pan troglodytes(Chimpanzee) | |
Product | E3 ubiquitin-protein ligase RNF4 | |
Comment | INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from DC529814.1, AACZ03036042.1 and AACZ03036041.1. On Oct 25, 2011 this sequence version replaced XR_127468.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments to chimpanzee transcript DC529814.1 and human NM_002938.4. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA2058386, SAMEA2058387 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001238838.1 |
CDS | 239..811 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001251909.1 |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc83196 | |
Clone ID Related Accession (Same CDS sequence) | NM_001251909.2 , XM_009447228.3 , XM_009447228.2 , NM_001251909.3 | |
Accession Version | NM_001251909.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-29 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | E3 ubiquitin-protein ligase RNF4 | |
Comment | Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from DC529814.1 and AACZ04060140.1. On Jun 30, 2017 this sequence version replaced NM_001251909.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments to chimpanzee transcript DC529814.1 and human NM_002938.4. ##Evidence-Data-START## Transcript exon combination :: GABE01016667.1, GABF01006400.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001238838.2 |
CDS | 239..811 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001251909.2 |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc83196 | |
Clone ID Related Accession (Same CDS sequence) | NM_001251909.2 , XM_009447228.3 , XM_009447228.2 , NM_001251909.3 | |
Accession Version | NM_001251909.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-10-12 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | E3 ubiquitin-protein ligase RNF4 | |
Comment | Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from DC529814.1 and NBAG03000389.1. On Jun 20, 2018 this sequence version replaced NM_001251909.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments to chimpanzee transcript DC529814.1 and human NM_002938.4. ##Evidence-Data-START## Transcript exon combination :: GABE01016667.1, SRR6713217.15939.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03018695 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001238838.2 |
CDS | 239..811 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001251909.3 |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc83196 | |
Clone ID Related Accession (Same CDS sequence) | NM_001251909.2 , XM_009447228.3 , XM_009447228.2 , NM_001251909.3 | |
Accession Version | XM_009447228.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | E3 ubiquitin-protein ligase RNF4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036883.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_009447228.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009445503.2 |
CDS | 286..858 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009447228.3 |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc83196 | |
Clone ID Related Accession (Same CDS sequence) | NM_001251909.2 , XM_009447228.3 , XM_009447228.2 , NM_001251909.3 | |
Accession Version | XM_009447228.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | E3 ubiquitin-protein ligase RNF4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006471.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009447228.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009445503.2 |
CDS | 286..858 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009447228.2 |
1 | ATGAGTACAA GAAAGCGTCG TGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |