Gene Symbol | MAMU-DPA |
Entrez Gene ID | 717992 |
Full Name | major histocompatibility complex, class II, DP alpha |
Synonyms | Mamu-DPA1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » MAMU-DPA cDNA ORF clone
Gene Symbol | MAMU-DPA |
Entrez Gene ID | 717992 |
Full Name | major histocompatibility complex, class II, DP alpha |
Synonyms | Mamu-DPA1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_015136066.2 | XP_014991552.2 | major histocompatibility complex, class II, DP alpha |
NM_001048247.1 | NP_001041712.1 | major histocompatibility complex, class II, DP alpha precursor |
XM_015136066.1 | XP_014991552.1 | major histocompatibility complex, class II, DP alpha isoform X1 |
Homo sapiens (human) | HLA-DPA1 | NP_001229453.1 |
MAMU-DPA | NP_001041712.1 | |
Danio rerio (zebrafish) | LOC795595 | XP_005165043.1 |
Danio rerio (zebrafish) | LOC100332204 | XP_002660434.3 |
Danio rerio (zebrafish) | zgc:123107 | NP_001032481.2 |
Danio rerio (zebrafish) | LOC571282 | XP_699949.2 |
Pan troglodytes (chimpanzee) | PATR-DPA1 | XP_518390.2 |
Danio rerio (zebrafish) | si:busm1-194e12.8 | XP_005167290.1 |
Danio rerio (zebrafish) | si:busm1-48c11.3 | NP_001007206.1 |
Danio rerio (zebrafish) | zgc:103599 | NP_001005975.1 |
Danio rerio (zebrafish) | LOC100332267 | XP_002660435.3 |
Danio rerio (zebrafish) | si:busm1-266f07.2 | NP_001004521.2 |
Danio rerio (zebrafish) | si:busm1-160c18.6 | NP_001007049.2 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Identification of Mamu-DPA1, Mamu-DQA1, and Mamu-DRA alleles in a cohort of Chinese rhesus macaques.
Deng Q, Zhang H, Xiang R, Zhang Z, Ling F, Zhuo M, Du H, Wang X
Immunogenetics65(12)901-4(2013 Dec)
The major histocompatibility complex class II alleles Mamu-DRB1*1003 and -DRB1*0306 are enriched in a cohort of simian immunodeficiency virus-infected rhesus macaque elite controllers.
Giraldo-Vela JP, Rudersdorf R, Chung C, Qi Y, Wallace LT, Bimber B, Borchardt GJ, Fisk DL, Glidden CE, Loffredo JT, Piaskowski SM, Furlott JR, Morales-Martinez JP, Wilson NA, Rehrauer WM, Lifson JD, Carrington M, Watkins DI
Journal of virology82(2)859-70(2008 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MAMU-DPA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MAMU-DPA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb01969 | |
Clone ID Related Accession (Same CDS sequence) | NM_001048247.1 | |
Accession Version | NM_001048247.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-28 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class II, DP alpha precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB219099.1. On Sep 28, 2006 this sequence version replaced XM_001115903.1. ##Evidence-Data-START## Transcript exon combination :: AB219099.1, AB250754.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688317 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCACCCTG AAGACAGAAT GTTCGAGACC AGAGCTGTTA TCTTGAGAAC CCTCTCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001041712.1 |
CDS | 1..783 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001048247.1 |
1 | ATGCACCCTG AAGACAGAAT GTTCGAGACC AGAGCTGTTA TCTTGAGAAC CCTCTCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31925 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136066.1 | |
Accession Version | XM_015136066.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class II, DP alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804798.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACCCTG AAGACAGAAT GTTCCAGACC AGAGCTGTTA TCTTGAGAAC CCTCTCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014991552.1 |
CDS | 790..1572 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136066.1 |
1 | ATGCACCCTG AAGACAGAAT GTTCCAGACC AGAGCTGTTA TCTTGAGAAC CCTCTCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84933 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136066.2 | |
Accession Version | XM_015136066.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class II, DP alpha | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015136066.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCCCTG AAGACAGAAT GTTCCAGACC AGAGCTGTTA TCTTGAGAAC CCTCTCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014991552.2 |
CDS | 791..1573 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136066.2 |
1 | ATGCGCCCTG AAGACAGAAT GTTCCAGACC AGAGCTGTTA TCTTGAGAAC CCTCTCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Identification of Mamu-DPA1, Mamu-DQA1, and Mamu-DRA alleles in a cohort of Chinese rhesus macaques. |
The major histocompatibility complex class II alleles Mamu-DRB1*1003 and -DRB1*0306 are enriched in a cohort of simian immunodeficiency virus-infected rhesus macaque elite controllers. |