Gene Symbol | COL9A1 |
Entrez Gene ID | 714809 |
Full Name | collagen type IX alpha 1 chain |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » COL9A1 cDNA ORF clone
Gene Symbol | COL9A1 |
Entrez Gene ID | 714809 |
Full Name | collagen type IX alpha 1 chain |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_001111640.3 | XP_001111640.2 | collagen alpha-1(IX) chain isoform X1 |
XM_028847450.1 | XP_028703283.1 | collagen alpha-1(IX) chain isoform X1 |
XM_015136654.1 | XP_014992140.1 | collagen alpha-1(IX) chain isoform X3 |
XM_015136653.2 | XP_014992139.2 | collagen alpha-1(IX) chain isoform X2 |
XM_001111519.4 | XP_001111519.1 | collagen alpha-1(IX) chain isoform X4 |
XM_015136653.1 | XP_014992139.1 | collagen alpha-1(IX) chain isoform X2 |
XM_001111519.3 | XP_001111519.1 | collagen alpha-1(IX) chain isoform X4 |
XM_015136654.2 | XP_014992140.1 | collagen alpha-1(IX) chain isoform X3 |
XM_028847451.1 | XP_028703284.1 | collagen alpha-1(IX) chain isoform X5 |
Pan troglodytes (chimpanzee) | COL9A1 | XP_001136406.1 |
Canis lupus familiaris (dog) | COL9A1 | XP_538994.3 |
Danio rerio (zebrafish) | col9a1 | NP_998429.2 |
Rattus norvegicus (Norway rat) | Col9a1 | NP_001094312.1 |
Mus musculus (house mouse) | Col9a1 | NP_031766.3 |
Danio rerio (zebrafish) | zgc:194937 | NP_001124096.1 |
COL9A1 | XP_001111640.1 | |
Xenopus tropicalis (tropical clawed frog) | col9a1 | XP_002939444.2 |
Homo sapiens (human) | COL9A1 | NP_001842.3 |
Gallus gallus (chicken) | COL9A1 | NP_001094381.1 |
The following COL9A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL9A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb17859 | |
Clone ID Related Accession (Same CDS sequence) | XM_001111519.3 | |
Accession Version | XM_001111519.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2037bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804811.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 21, 2015 this sequence version replaced XM_001111519.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAGGA CTGCGCGGGA CCGCGGGGCC CTGGGGCTGC TGCTGTCAGG GCTCTGCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_001111519.1 |
CDS | 179..2215 |
Translation |
Target ORF information:
Target ORF information:
|
XM_001111519.3 |
1 | ATGGCCAGGA CTGCGCGGGA CCGCGGGGCC CTGGGGCTGC TGCTGTCAGG GCTCTGCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb32319 | |
Clone ID Related Accession (Same CDS sequence) | XM_001111640.3 | |
Accession Version | XM_001111640.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2829bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804811.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 21, 2015 this sequence version replaced XM_001111640.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTGCA CTGGAAATAT TTTGAAAGGG ACTGTTGGCA AACAAAGAAA ATCAACTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_001111640.2 |
CDS | 893..3721 |
Translation |
Target ORF information:
Target ORF information:
|
XM_001111640.3 |
1 | ATGGCCTGCA CTGGAAATAT TTTGAAAGGG ACTGTTGGCA AACAAAGAAA ATCAACTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb32320 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136653.1 | |
Accession Version | XM_015136653.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804811.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTGCA CTGGAAATAT TTTGAAAGGA TTCCCTGCCA ATTCCAATTC TAATGGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014992139.1 |
CDS | 892..3597 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136653.1 |
1 | ATGGCCTGCA CTGGAAATAT TTTGAAAGGA TTCCCTGCCA ATTCCAATTC TAATGGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb32321 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136654.1 | |
Accession Version | XM_015136654.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2412bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804811.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTGGAA GCACACTCAA AAAGAACTGG AACATTTGGC AGATTCAGGA TTCCTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014992140.1 |
CDS | 137..2548 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136654.1 |
1 | ATGACTGGAA GCACACTCAA AAAGAACTGG AACATTTGGC AGATTCAGGA TTCCTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84587 | |
Clone ID Related Accession (Same CDS sequence) | XM_028847450.1 | |
Accession Version | XM_028847450.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2766bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACTT GCTGGAAAAT TCCAGTTTTC TTCTTTGTGT GCAGTTTCCT GGAGCCCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028703283.1 |
CDS | 154..2919 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028847450.1 |
1 | ATGAAGACTT GCTGGAAAAT TCCAGTTTTC TTCTTTGTGT GCAGTTTCCT GGAGCCCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84588 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136653.2 | |
Accession Version | XM_015136653.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015136653.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTGCA CTGGAAATAT TTTGAAAGGA TTCCCTGCCA ATTCCAATTC TAATGGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014992139.2 |
CDS | 395..3100 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136653.2 |
1 | ATGGCCTGCA CTGGAAATAT TTTGAAAGGA TTCCCTGCCA ATTCCAATTC TAATGGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84589 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136654.2 | |
Accession Version | XM_015136654.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2412bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015136654.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTGGAA GCACACTCAA AAAGAACTGG AACATTTGGC AGATTCAGGA TTCCTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014992140.1 |
CDS | 140..2551 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136654.2 |
1 | ATGACTGGAA GCACACTCAA AAAGAACTGG AACATTTGGC AGATTCAGGA TTCCTCTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84590 | |
Clone ID Related Accession (Same CDS sequence) | XM_001111519.4 | |
Accession Version | XM_001111519.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2037bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_001111519.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAGGA CTGCGCGGGA CCGCGGGGCC CTGGGGCTGC TGCTGTCAGG GCTCTGCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_001111519.1 |
CDS | 175..2211 |
Translation |
Target ORF information:
Target ORF information:
|
XM_001111519.4 |
1 | ATGGCCAGGA CTGCGCGGGA CCGCGGGGCC CTGGGGCTGC TGCTGTCAGG GCTCTGCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84591 | |
Clone ID Related Accession (Same CDS sequence) | XM_028847451.1 | |
Accession Version | XM_028847451.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1980bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | collagen alpha-1(IX) chain isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACTCTG CAGAGAGAGG TCCCCCCGGC GAGCAGGGTC CTCCAGGGCC TCCGGGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028703284.1 |
CDS | 16..1995 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028847451.1 |
1 | ATGCACTCTG CAGAGAGAGG TCCCCCCGGC GAGCAGGGTC CTCCAGGGCC TCCGGGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.