Gene Symbol | MAMU-A3 |
Entrez Gene ID | 699243 |
Full Name | major histocompatibility complex, class I, A |
Synonyms | Mamu-A,Mamu-A1,Mamu-A4 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » MAMU-A3 cDNA ORF clone
Gene Symbol | MAMU-A3 |
Entrez Gene ID | 699243 |
Full Name | major histocompatibility complex, class I, A |
Synonyms | Mamu-A,Mamu-A1,Mamu-A4 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_028846905.1 | XP_028702738.1 | major histocompatibility complex, class I, A isoform X2 |
XM_028846904.1 | XP_028702737.1 | major histocompatibility complex, class I, A isoform X1 |
XM_028846907.1 | XP_028702740.1 | major histocompatibility complex, class I, A isoform X4 |
NM_001171838.1 | NP_001165309.1 | major histocompatibility complex, class I, A precursor |
XM_028846906.1 | XP_028702739.1 | major histocompatibility complex, class I, A isoform X3 |
XM_028846908.1 | XP_028702741.1 | major histocompatibility complex, class I, A isoform X5 |
Mus musculus (house mouse) | Gm8909 | NP_001074501.2 |
Mus musculus (house mouse) | H2-Bl | NP_032225.2 |
Mus musculus (house mouse) | H2-Q2 | NP_034522.2 |
Rattus norvegicus (Norway rat) | RT1-A1 | NP_001008827.1 |
Rattus norvegicus (Norway rat) | RT1-CE2 | NP_001008840.1 |
Rattus norvegicus (Norway rat) | RT1-CE5 | NP_001008843.1 |
Rattus norvegicus (Norway rat) | RT1-A2 | NP_001008829.1 |
Rattus norvegicus (Norway rat) | LOC100364500 | XP_006255953.1 |
Gallus gallus (chicken) | MICA | XP_415354.4 |
Gallus gallus (chicken) | MR1 | XP_004945738.1 |
Gallus gallus (chicken) | LOC100858581 | XP_003643753.2 |
Gallus gallus (chicken) | LOC417083 | XP_003642294.2 |
Gallus gallus (chicken) | LOC100858733 | XP_003643847.2 |
Danio rerio (zebrafish) | LOC100536229 | XP_003201722.1 |
Danio rerio (zebrafish) | zgc:136614 | NP_001077014.1 |
MAMU-A3 | NP_001165309.1 | |
Mus musculus (house mouse) | H2-D1 | NP_034510.3 |
Mus musculus (house mouse) | Gm10499 | XP_006525296.1 |
Mus musculus (house mouse) | H2-Q4 | NP_001137161.1 |
Mus musculus (house mouse) | H2-Q7 | NP_034524.3 |
Rattus norvegicus (Norway rat) | RT1-CE7 | NP_001008845.1 |
Rattus norvegicus (Norway rat) | RT1-CE1 | NP_001008832.1 |
Rattus norvegicus (Norway rat) | RT1-CE10 | NP_001008833.1 |
Gallus gallus (chicken) | BF2 | NP_001026509.1 |
Gallus gallus (chicken) | LOC100859100 | XP_003642292.2 |
Gallus gallus (chicken) | LOC769716 | XP_001233005.3 |
Gallus gallus (chicken) | LOC100859374 | XP_003643261.1 |
Gallus gallus (chicken) | LOC100859408 | XP_003643262.1 |
Gallus gallus (chicken) | LOC101752075 | XP_004950216.1 |
Gallus gallus (chicken) | YF6 | XP_003643784.1 |
Danio rerio (zebrafish) | LOC563036 | XP_001919291.4 |
Mus musculus (house mouse) | H2-Q1 | NP_034520.2 |
Rattus norvegicus (Norway rat) | RT1-CE16 | NP_001008839.1 |
Rattus norvegicus (Norway rat) | RT1-CE3 | NP_001008841.1 |
Gallus gallus (chicken) | BF1 | XP_004945708.1 |
Gallus gallus (chicken) | LOC417058 | XP_004950006.1 |
Gallus gallus (chicken) | LOC417057 | XP_415345.4 |
Gallus gallus (chicken) | LOC100859282 | XP_003642295.2 |
Mus musculus (house mouse) | H2-Q10 | NP_034521.1 |
Gallus gallus (chicken) | LOC430600 | XP_428156.3 |
Gallus gallus (chicken) | LOC100859012 | XP_003643257.1 |
Gallus gallus (chicken) | LOC100859807 | XP_003643267.1 |
Gallus gallus (chicken) | LOC100859881 | XP_003643268.1 |
Danio rerio (zebrafish) | mhc1zba | NP_001103588.1 |
Homo sapiens (human) | HLA-A | NP_002107.3 |
Pan troglodytes (chimpanzee) | PATR-A | NP_001009058.2 |
Mus musculus (house mouse) | H2-K1 | NP_001001892.2 |
Mus musculus (house mouse) | H2-Q6 | NP_997531.1 |
Rattus norvegicus (Norway rat) | RT1-CE13 | NP_001008836.1 |
Rattus norvegicus (Norway rat) | RT1-CE4 | NP_001008842.1 |
Gallus gallus (chicken) | LOC100858943 | XP_003643255.2 |
Gallus gallus (chicken) | LOC100857553 | XP_003643732.2 |
Gallus gallus (chicken) | LOC768350 | NP_001171648.1 |
Gallus gallus (chicken) | LOC417080 | XP_003643749.2 |
Danio rerio (zebrafish) | si:ch211-287j19.6 | NP_001039028.1 |
Danio rerio (zebrafish) | LOC556263 | XP_003198042.1 |
Danio rerio (zebrafish) | mhc1zja | NP_001103188.1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Full-length novel MHC class I allele discovery by next-generation sequencing: two platforms are better than one.
Dudley DM, Karl JA, Creager HM, Bohn PS, Wiseman RW, O'Connor DH
Immunogenetics66(1)15-24(2014 Jan)
Rhesus macaque inhibitory and activating KIR3D interact with Mamu-A-encoded ligands.
Rosner C, Kruse PH, Hermes M, Otto N, Walter L
Journal of immunology (Baltimore, Md. : 1950)186(4)2156-63(2011 Feb)
Diversity of MHC class I genes in Burmese-origin rhesus macaques.
Naruse TK, Chen Z, Yanagida R, Yamashita T, Saito Y, Mori K, Akari H, Yasutomi Y, Miyazawa M, Matano T, Kimura A
Immunogenetics62(9)601-11(2010 Sep)
The most common Chinese rhesus macaque MHC class I molecule shares peptide binding repertoire with the HLA-B7 supertype.
Solomon C, Southwood S, Hoof I, Rudersdorf R, Peters B, Sidney J, Pinilla C, Marcondes MC, Ling B, Marx P, Sette A, Moth? BR
Immunogenetics62(7)451-64(2010 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MAMU-A3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MAMU-A3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb23782 | |
Clone ID Related Accession (Same CDS sequence) | NM_001171838.1 | |
Accession Version | NM_001171838.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-11-10 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class I, A precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF186797.1. On Jan 28, 2010 this sequence version replaced XR_010532.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: EF186797.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA27160918, SAMEA27161668 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGATCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GGCTCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001165309.1 |
CDS | 1..1098 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001171838.1 |
1 | ATGGCGATCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GGCTCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83815 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846904.1 | |
Accession Version | XM_028846904.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1179bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class I, A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702737.1 |
CDS | 16..1194 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846904.1 |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83816 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846905.1 | |
Accession Version | XM_028846905.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1101bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class I, A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702738.1 |
CDS | 89..1189 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846905.1 |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83817 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846906.1 | |
Accession Version | XM_028846906.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1017bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class I, A isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTGGG GAGTCCCAGC GTTGGGGATT CCCCATCTCC GCAGTTTCTC TTCTTCTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702739.1 |
CDS | 16..1032 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846906.1 |
1 | ATGGATTGGG GAGTCCCAGC GTTGGGGATT CCCCATCTCC GCAGTTTCTC TTCTTCTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83818 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846907.1 | |
Accession Version | XM_028846907.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 888bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class I, A isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702740.1 |
CDS | 95..982 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846907.1 |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83819 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846908.1 | |
Accession Version | XM_028846908.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 855bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class I, A isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702741.1 |
CDS | 90..944 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846908.1 |
1 | ATGGCGGTCA TGGCGCCCCG AACCCTCCTC CTGGTGCTCT CAGGGGCCCT GACCCAGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Full-length novel MHC class I allele discovery by next-generation sequencing: two platforms are better than one. |
Rhesus macaque inhibitory and activating KIR3D interact with Mamu-A-encoded ligands. |
Diversity of MHC class I genes in Burmese-origin rhesus macaques. |
The most common Chinese rhesus macaque MHC class I molecule shares peptide binding repertoire with the HLA-B7 supertype. |