Gene Symbol | SOBP |
Entrez Gene ID | 698484 |
Full Name | sine oculis binding protein homolog |
Synonyms | JXC1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » SOBP cDNA ORF clone
Gene Symbol | SOBP |
Entrez Gene ID | 698484 |
Full Name | sine oculis binding protein homolog |
Synonyms | JXC1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_028846666.1 | XP_028702499.1 | sine oculis-binding protein homolog isoform X2 |
XM_015137029.1 | XP_014992515.1 | sine oculis-binding protein homolog isoform X2 |
NM_001104534.1 | NP_001098004.1 | sine oculis-binding protein homolog |
XM_028846667.1 | XP_028702500.1 | sine oculis-binding protein homolog isoform X3 |
XM_015137028.1 | XP_014992514.1 | sine oculis-binding protein homolog isoform X1 |
XM_015137029.2 | XP_014992515.2 | sine oculis-binding protein homolog isoform X1 |
XM_028846668.1 | XP_028702501.1 | sine oculis-binding protein homolog isoform X4 |
Pan troglodytes (chimpanzee) | SOBP | XP_003950979.1 |
Danio rerio (zebrafish) | sobpa | NP_001092088.1 |
SOBP | NP_001098004.1 | |
Bos taurus (cattle) | SOBP | NP_001094640.2 |
Xenopus tropicalis (tropical clawed frog) | sobp | NP_001096678.1 |
Homo sapiens (human) | SOBP | NP_060483.3 |
Canis lupus familiaris (dog) | SOBP | XP_005627839.1 |
Mus musculus (house mouse) | Sobp | NP_780616.4 |
Rattus norvegicus (Norway rat) | Sobp | NP_001098110.1 |
Gallus gallus (chicken) | SOBP | NP_001103647.1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SOBP gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SOBP cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb83567 | |
Clone ID Related Accession (Same CDS sequence) | XM_015137029.2 | |
Accession Version | XM_015137029.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2529bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | sine oculis-binding protein homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015137029.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014992515.2 |
CDS | 518..3046 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015137029.2 |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83568 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846666.1 | |
Accession Version | XM_028846666.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2511bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | sine oculis-binding protein homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATGAAC TGCTTGGCTG GTATGGCTAT GATAAGGTTG AATTAAAAGA TGGTGAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702499.1 |
CDS | 120..2630 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846666.1 |
1 | ATGAATGAAC TGCTTGGCTG GTATGGCTAT GATAAGGTTG AATTAAAAGA TGGTGAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83569 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846667.1 | |
Accession Version | XM_028846667.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2625bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | sine oculis-binding protein homolog isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702500.1 |
CDS | 206..2830 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846667.1 |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb83570 | |
Clone ID Related Accession (Same CDS sequence) | XM_028846668.1 | |
Accession Version | XM_028846668.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2178bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | sine oculis-binding protein homolog isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTGCCT GGTGCCAGAA AGTGGGAATC AAGCGCTATT CCCTGAGTAT GGGAAGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028702501.1 |
CDS | 494..2671 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028846668.1 |
1 | ATGTGTGCCT GGTGCCAGAA AGTGGGAATC AAGCGCTATT CCCTGAGTAT GGGAAGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb02131 | |
Clone ID Related Accession (Same CDS sequence) | NM_001104534.1 | |
Accession Version | NM_001104534.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2625bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | sine oculis-binding protein homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ503411.1. On Sep 14, 2007 this sequence version replaced XM_001090687.1. ##Evidence-Data-START## Transcript exon combination :: DQ503411.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA4688315, SAMEA4688316 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001098004.1 |
CDS | 1..2625 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001104534.1 |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb32567 | |
Clone ID Related Accession (Same CDS sequence) | XM_015137028.1 | |
Accession Version | XM_015137028.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2625bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | sine oculis-binding protein homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804821.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014992514.1 |
CDS | 515..3139 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015137028.1 |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb32568 | |
Clone ID Related Accession (Same CDS sequence) | XM_015137029.1 | |
Accession Version | XM_015137029.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2529bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | sine oculis-binding protein homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804821.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014992515.1 |
CDS | 515..3043 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015137029.1 |
1 | ATGGCAGAAA TGGAGAAAGA AGGGAGACCT CCGGAAAATA AACGGAGCAG GAAGCCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |