LOC4332840 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

  • Gene

  • Clones

  • gRNAs

The following LOC4332840 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4332840 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa30195 XM_015775273.2
Latest version!
Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $342.30
$489.00
OOa30195 XM_015775272.2
Latest version!
Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $342.30
$489.00
View Old Accession Versions >>
OOa30195 XM_015775273.1 Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $342.30
$489.00
OOa30195 XM_015775272.1 Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OOa30195
    Clone ID Related Accession (Same CDS sequence) XM_015775272.1 , XM_015775273.1 , XM_015775273.2 , XM_015775272.2
    Accession Version XM_015775272.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1707bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product probable nucleolar protein 5-2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379176.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015630758.1
    CDS223..1929
    Translation

    Target ORF information:

    RefSeq Version XM_015775272.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015775272.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OOa30195
    Clone ID Related Accession (Same CDS sequence) XM_015775272.1 , XM_015775273.1 , XM_015775273.2 , XM_015775272.2
    Accession Version XM_015775273.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1707bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product probable nucleolar protein 5-2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379176.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015630759.1
    CDS221..1927
    Translation

    Target ORF information:

    RefSeq Version XM_015775273.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015775273.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OOa30195
    Clone ID Related Accession (Same CDS sequence) XM_015775272.1 , XM_015775273.1 , XM_015775273.2 , XM_015775272.2
    Accession Version XM_015775273.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1707bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product probable nucleolar protein 5-2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029258.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015775273.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015630759.1
    CDS223..1929
    Translation

    Target ORF information:

    RefSeq Version XM_015775273.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015775273.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OOa30195
    Clone ID Related Accession (Same CDS sequence) XM_015775272.1 , XM_015775273.1 , XM_015775273.2 , XM_015775272.2
    Accession Version XM_015775272.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1707bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product probable nucleolar protein 5-2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029258.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015775272.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015630758.1
    CDS226..1932
    Translation

    Target ORF information:

    RefSeq Version XM_015775272.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group probable nucleolar protein 5-2 (LOC4332840), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015775272.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGGTGC TGTTCGAGAC GCCCGCGGGG TTCGCCCTCT TCAAGGTGCT CGACGAGGGG 
    AAGCTCGACA AGGTCGAGGA TTTATGGAAG GAGTTCACGA CGTCTGACTC GGCGAGAAAG
    GTGGTTGAGC TGAAGGCTTT CAACAAGTTT GAGAACACAT CTGATGCCCT TTCTGCTGCA
    ACCCTCATTA TTGACAGCAA GCCTACCAAG GGTTTGCGCA AGTTCTTGCA GAAGCACTGT
    GAGGGTGAAA CATTAGCTGT GGCTGACTCT AAACTTGGAA ATGCTATAAA GGAGAAGCTG
    AAAATTGACT GCCTTCATAA TAGTGCTGTG ATGGAGCTCA TGAGAGGGTT AAGAAACCAG
    CTCACTGAAC TTATCTCTGG TTTGGGTGCA CAAGACCTTG GTCCAATGAG CCTTGGCTTG
    TCCCACAGTT TGTCTAGATA TAAGCTGAAG TTCAGTCCTG AAAAGGTTGA TACTATGATC
    ATTCAGGCCA TTGGCTTATT GGATGATCTT GACAAGGAGC TTAACACTTA TGCCATGAGG
    GTTCGTGAAT GGTATGGGTG GCACTTTCCA GAGCTCACTA AAATTGTAGC TGATAACATA
    CAGTACGCAA AAGTTGTGAA GATGATGGGT GATCGGACTA ACGCAGAAAG CCTTGATTTC
    TCTGAGATAC TTTCAGATGA TGAGGTTGAA GCACAGCTAA AAGAGGCGGC AGTAATATCC
    ATGGGAACAG AAGTTAGTGA ACTTGACTTG CTAAATATCA GGGAGCTGTG TGATCAGGTG
    TTGGCTCTTT CTGAGTACAG AGCCCAGCTG TTTGATTATC TGAGAAGCAG GATGAACACT
    ATCGCACCAA ATTTGACTGC ACTTGTTGGC GAATTGGTTG GTGCTCGACT TATTGCACAT
    GGCGGCAGTT TGGTAAATCT GGCCAAGCAG CCTGGCAGCA CAATTCAGAT ACTTGGTGCA
    GAGAAGGCTT TGTTCAGAGC TCTAAAGACA AAGCATGCTA CGCCAAAGTA TGGTCTCATC
    TACCATGCAT CCTTAATTGG TCAAGCAGCT CCAAAGCACA AGGGGAAGAT TTCTCGTTCT
    CTTGCTGCAA AAACTGCTCT TGCCATTCGG TATGATGCCC TTGGTGATGG TGAAGATAAC
    TCCATTGGTC TTGAGAGTCG AGTCAAGCTT GAGACACGGC TTCGGGTTCT TGAGGGTAAA
    GAACTTGGCA GGTCTGCAGG TTCTACTAAG GGAAAGCCCA AGATAGAAGT GTATGAAAAG
    GACCGGAAGA AGGGTGCTGG GGCTTTAATC ACTCCTGCCA AGACATACAA TCCTGCGGCT
    GATCTGGTAC TTGGACAATC CACTGAAGAA ACACCAAAGA AGCCTGAAGG TGCTTCAAAG
    AAGAGGAAAC ATCAAGAGGC GGAGCCTGCA GGTGCAGAGG AAACCATTCA AGAGGATGGT
    GACCAAGAGG GTCAGAAGAA AAAGAAGAAA AAAAAGTCCA AAGATAGCGA GGATTCTCCT
    GTGGCCGATG CTGATGGCGG CAAGAAAAAG AAAAAGAAGT CCAAGGAGAG CGAGGAGCCA
    CCTGTAGCCA CCGCTGAAGG TGAGAAGAAG GAGAAGAAGA AAAAGAAGAA ATCTGATTCA
    CAAGATGCTA AGGATGTTGC CATGGAAACC GAAGCGTCTG GTAAGAAAGA CAAAAAGAAA
    AAGAAGAAAA AGCATGGTGA TGAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.