| Gene Symbol | ptchd1 |
| Entrez Gene ID | 100704399 |
| Full Name | patched domain containing 1 |
| Gene Type | protein-coding |
| Organism | Oreochromis niloticus(Nile tilapia) |
ORF » Species Summary » Oreochromis niloticus » ptchd1 cDNA ORF clone
| Gene Symbol | ptchd1 |
| Entrez Gene ID | 100704399 |
| Full Name | patched domain containing 1 |
| Gene Type | protein-coding |
| Organism | Oreochromis niloticus(Nile tilapia) |
| mRNA | Protein | Name |
|---|---|---|
| XM_005449081.2 | XP_005449138.1 | patched domain-containing protein 1 isoform X1 |
| XM_005449082.3 | XP_005449139.1 | patched domain-containing protein 1 isoform X1 |
| XM_025910525.1 | XP_025766310.1 | patched domain-containing protein 1 isoform X1 |
| XM_025910527.1 | XP_025766312.1 | patched domain-containing protein 1 isoform X2 |
| XM_005449082.2 | XP_005449139.1 | patched domain-containing protein 1 isoform X2 |
| XM_005449084.3 | XP_005449141.1 | patched domain-containing protein 1 isoform X3 |
| XM_005449084.4 | XP_005449141.1 | patched domain-containing protein 1 isoform X3 |
The following ptchd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ptchd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OOr174845 | |
| Clone ID Related Accession (Same CDS sequence) | XM_025910527.1 | |
| Accession Version | XM_025910527.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2757bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-07-25 | |
| Organism | Oreochromis niloticus(Nile tilapia) | |
| Product | patched domain-containing protein 1 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031974.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oreochromis niloticus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTGGACA CGCTGAGCTC TGCTAAGGAG ATTGAGTTTG TGAGAGCTCC ATCCATGCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_025766312.1 |
| CDS | 19..2775 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_025910527.1 |
1 | ATGCTGGACA CGCTGAGCTC TGCTAAGGAG ATTGAGTTTG TGAGAGCTCC ATCCATGCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OOr71678 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005449081.2 | |
| Accession Version | XM_005449081.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3051bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-12-04 | |
| Organism | Oreochromis niloticus(Nile tilapia) | |
| Product | patched domain-containing protein 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031974.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 5, 2016 this sequence version replaced XM_005449081.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oreochromis niloticus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005449138.1 |
| CDS | 960..4010 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005449081.2 |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OOr71679 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005449082.3 , XM_025910525.1 , XM_005449082.2 | |
| Accession Version | XM_005449082.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2961bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-07-25 | |
| Organism | Oreochromis niloticus(Nile tilapia) | |
| Product | patched domain-containing protein 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031974.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2018 this sequence version replaced XM_005449082.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oreochromis niloticus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005449139.1 |
| CDS | 1670..4630 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005449082.3 |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OOr71679 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005449082.3 , XM_025910525.1 , XM_005449082.2 | |
| Accession Version | XM_025910525.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2961bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-07-25 | |
| Organism | Oreochromis niloticus(Nile tilapia) | |
| Product | patched domain-containing protein 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031974.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oreochromis niloticus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_025766310.1 |
| CDS | 1379..4339 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_025910525.1 |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OOr71679 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005449082.3 , XM_025910525.1 , XM_005449082.2 | |
| Accession Version | XM_005449082.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2961bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-12-04 | |
| Organism | Oreochromis niloticus(Nile tilapia) | |
| Product | patched domain-containing protein 1 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031974.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 5, 2016 this sequence version replaced XM_005449082.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oreochromis niloticus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005449139.1 |
| CDS | 1248..4208 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005449082.2 |
1 | ATGCTCGGCA GTGCTCCGGG GCTTTCCGGT CGGTGGGAGA GGCTCGAGCC GCGGCCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OOr71680 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005449084.3 , XM_005449084.4 | |
| Accession Version | XM_005449084.3 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2526bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-12-04 | |
| Organism | Oreochromis niloticus(Nile tilapia) | |
| Product | patched domain-containing protein 1 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031974.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 5, 2016 this sequence version replaced XM_005449084.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oreochromis niloticus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAGGTAA CCGTGCCAGC AACAGGCTTC AACAGTTTCA ACTACTCCTT CTCCAACCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005449141.1 |
| CDS | 296..2821 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005449084.3 |
1 | ATGCAGGTAA CCGTGCCAGC AACAGGCTTC AACAGTTTCA ACTACTCCTT CTCCAACCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OOr71680 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005449084.3 , XM_005449084.4 | |
| Accession Version | XM_005449084.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2526bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-07-25 | |
| Organism | Oreochromis niloticus(Nile tilapia) | |
| Product | patched domain-containing protein 1 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_031974.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2018 this sequence version replaced XM_005449084.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oreochromis niloticus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAGGTAA CCGTGCCAGC AACAGGCTTC AACAGTTTCA ACTACTCCTT CTCCAACCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005449141.1 |
| CDS | 274..2799 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005449084.4 |
1 | ATGCAGGTAA CCGTGCCAGC AACAGGCTTC AACAGTTTCA ACTACTCCTT CTCCAACCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.