LOC102778812 cDNA ORF clone, Neolamprologus brichardi

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC102778812
Entrez Gene ID	102778812
Full Name	MHC class II transactivator-like
Gene Type	protein-coding
Organism	Neolamprologus brichardi

mRNA and Protein(s)

mRNA	Protein	Name
XM_006798046.1	XP_006798109.1	MHC class II transactivator-like

Pathways from BioSystems
Gene Ontology

The following LOC102778812 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC102778812 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ONe78970	XM_006798046.1 Latest version!	Neolamprologus brichardi MHC class II transactivator-like (LOC102778812), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC102778812 ( XM_006798046.1 ) cDNA ORF clone, Neolamprologus brichardi -> XP_006798109.1 Neolamprologus brichardi MHC class II transactivator-like (LOC102778812), mRNA.

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CloneID	ONe78970
Clone ID Related Accession (Same CDS sequence)	XM_006798046.1
Accession Version	XM_006798046.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3762bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-02-09
Organism	Neolamprologus brichardi
Product	MHC class II transactivator-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006272055.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Neolamprologus brichardi Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 5.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGGCAG GGGTCACCGA AAATGTTTAT GGAACAGCAA CCTGGGACAT AGATGGAATA 
ACAGGCATAA AGGACACTGT GGAGTCACAC TGTGATGTCA AGATGCTGGA AGTGAATCCC 
AATCCCATCG CAGTCCCTTT GGACTTGGCG GATCTGTTGA TAGATGATTT GGCTGATGAT 
ATAAATGAAA AATTGCTGGA TGTTGATTCC CTCTTTGACT ACTTAGAACT CACCGACAGC 
CTTCCTCATC CGTGGACCTT TGATGACCTC CCCACAGCAG CTGAGGTACC CATCGCCAAC 
AGCATTGAGC AGATACAGGA ACCCAAAGCA AAAGGCCAAT CACGAAGGAG AAAAAGACAG 
AGAGATTCTC AGCCACAGCT GTGCTCCGAT GAAAGCCCCA AAGCAAAACG CCCAAAACCA 
TCAGGTCAAC CAAAAACCAA AGTGTCACAG GCTGAGCCAG CTGTTGAGCC AGGCAGTGAT 
CCCGCATCAG GGCCGAGTCC GGCAGAGACT TTACCGATGT CCACCGCCAC TCCACCAAGG 
ATTTTTCGCG TCTACCCTTC CCAAACAAGC TCTGCGATTC CCATTCAGTT TATCACTATC 
TCAGATTCCG CAGGAAATCC AGTCCAGCTT TCTCCTCCTC CTCCGCTCAT TAGGTTTCCA 
CTCCCCGGCA GCGCCACTAC ACCTACATAT ATATTAGTTC CTACTGTGTC ACCACCCCCC 
AAATGCCAAT TACCACCACT CTCCCCAGTC GGTGGCACAG TCGCTCCGGT CCAAATGAGT 
TCGTCCCCAC TGGGTTCTCT GTCAGAAGCA GCTAGCAAAG CCATGTCTCC CACTTGTACC 
TCACCTGTAT CCCCAGGCAA TGAAATGTCT CCATGTAAGG AATCACCTCT TCCTCAGTCT 
CCCAAGGTCC TTAATATTCC ACAGAATGTC AAGGACTACA TTCAAGAAGC CAAAGCTCAC 
ATGAGTCAAA CCTACCAGGA TATGGAGGCG GGCCTCAGCC TGTCTTCTCA TTATGTAGAT 
GTTCAAGTGA GCCAAAGAGA GGTAGTTCGC TCTGGGAAAA ATACAAACAA ATGCCTGGAC 
AAGGAGCTAG TCATCAAGGG AGACACAGAT AGGCAAAAAA CCATGCTGGC ACTGAGTCAG 
ATCTTTGATG GTTCAAATGG AGAAAAATCC AGACGGTACA TTTTGCTGCT TGGCAATGCC 
GGCATGGGAA AAACCACTCT GATCAAGAAG CTGTGTATTG ATTGGTCCAG AGACTGCATC 
CCTCAGTTTG ACTTTGTATT CCTATTAGAT GGCAAAAAGC TCAGTGTGAC AGAGCCGGTC 
TACAGTCTTC AGACACTCCT GCTCAACCTC TCCTCCTCTG CCCCATCCTG TGTGGACCCA 
GAAGCAGTGT ATGCTCAAAT CCTGGCAGCC CCTAAGCGTG TGCTCATCAT TTTTGATGGT 
TTTGATGAAT TGCGGAACTA TGAAACTCTA CTTCAAGCTC AGGAAAAAGA CCTAACAGCT 
TCACTGCAAA AAGACAGCAA GGCAAAGACT TTCACAGTGA GGCAGTTGTA TTCTGCCATT 
CTTCAAAGGG TCCTGCTTCC AGGCTGCACT CTTCTACTCT CCACCCGGCC ACGGGGAACT 
GCCAGCCAGC TGCTCAGGCG TACAGACAGC CTTCTGGAGA TGTGTGGGTT TACCCCAGCA 
AATGTGGAAA CATATTTGTC CCAGTACTTC TCTGATCCTG GCCTCAGAGA ATCAGCTTTG 
GAGAGTCTAA AAAGCATGAG CTACCTAAAT CTTCTTTGCT GGAACCCCGG ACTATGCCGG 
CTGGTGTGCT TGATTTTAGA GCAGTCTAGA AGTGTGGATG TCCTACCAAG AACTTTAACT 
GGGCTCTGTC ATCAGGTGCT GTGTTTAAAA ATGGATAAAG ACGGCAGGAG TACTCCCACG 
CACACCGAAG CTCAAGCACA ATCCATAAGA GACACTGAGA CACAAATTTC AAATACCTCT 
CAGGCGAAGA AGTGTTCGAA AAATAATCAG GCGAAGTCCA GAACGCAGGC ACGCACTTCC 
TCTCGCACCC AAAGGGCAAA AAAGGCACAA AAACAGGAGG CGCAAGTAGA CAAAGTGGAT 
CAGGATCTCA GGAGCAGTGG CGGAGAAGTC GTAACGGAGG ACTTTGACTT GTTGTCCCAG 
CTGAGCTCTT TGGCCTGGGA AGGGGTCAAA GCCAACTCTT CCATCCTTCC CACAGGACGG 
GACATATCTG GCAAAGTCAA GGCATTTGGT CTGAGAACAG GCCTCTTTCT CTCTCATCAG 
CTGAGAGCGA GTCCATGCCT CTCAAATAGT ACCAAGGAGG AAGGAGAAAA TGAGACAGAA 
GCTGGAGAGA CAGAACAGAG GACTGAAAAC AGTGAAAGGA CCACCAATGA TTTAACTGAT 
CACCAAAATG ACCAGATCCT CTTGTGGGCC AACCCTTTCC TTCAGAGTTA CATTGCAGGA 
GTACATCTGG CTTTGTCAAG GACTTTAACA GACCGGTCCT TTCTCCAGAC TCTCCCTTTC 
CAGTCTGGAG GGAAAGGTCG TCGGCGACCT CAAAGGGAGG AACTTGAGCT CACTCAGCGA 
TTTGCAGTTG GCCTCTTGTT CCACAATAGG ACAGAACTGC AGCGATTCCA CACGCATACA 
GAGACAGCCT TTAGAGATAT GGTGGCTAAC AAGCAGGGGT TGGTAACAAA ACACCTGGAA 
GGGCTTTCTT ACGCTGACCT TACTCCCTCC CAAATCTTGG AGGCATGCCA CTACGTCTAC 
GAGGCGAGTT TTACGTACAG TGATGGTGGC CGAGAAGCTG GCAGGACTCG GCTGGGGACA 
CACCTGGCAG CAAATCTTCC AGAGTTCCTG ACGTTTCATG GAGTTCAACT AAGCCCGCCA 
GATGTGTTCA CTGTTCAGAA AGCACTTGAA CAGGGGGGAA CTGAAGGCAG AAGTTTCTGT 
TTGGACCTGG AGGACTCTGG CATCCAGATC TGTGGACTTC AAGCTCTGGT TGGCCTCAAC 
AACATCAACA CATACAGGTC ATGCATTGCT GACGCCATCA CCCTCTGGGA GCTGCTGGAG 
CAGAGTGACG AAGAAAGTCT CCTCCAGAGG GCAGTGTCCA AGTTCACAAT CCATCCTTTG 
AAAGCTAAAC AGGTGTGTCA TATAGAGCAC CTGGAAAAGC TGGTGAACAT ACACATTCAC 
AAGAGGCTAT CAGACAGCTC CAGCGAGTCT CACTCCATCC TGTCTGAGGG CGTGCCAGCA 
GTTAAAGAGC TACACAAGCT GGAGTTTGAA CTTGGTCCAG ATAATGGTCC TCTGGTTCTT 
CCGAAGCTGT GGGATCTCCT GCCAGGGCTG CATAACCTAC AGCACTTGGA CTTAGAGAAC 
AGCAAGATCG GGGACGAAGG AGCAGAGAAG CTGGCCAGTG CTTTAGTCTC ACTCCCTTCT 
TTGGAGATAC TTAATCTATC ACAGAACTGC ATAGGAGACG AGGGTGTGAA GACGTTAGCA 
GCCACACTGA AGGACCTGCC TAATCTGCAC TGTTTAAGTG TCTACAGCAA CATGATTTCT 
GATGAAGGGG CAGAGAGTTT AGCAGCTGTT CTCCCACACA TGGCTTCCCT CACTGACCTT 
GACGTAAAGT TTAACAAACT AACAGATGTC GGCGCACAGA GCTTAGGAGC CAGCCTAAGA 
AACTGTACAA AAGTTAAGAC TTTAAGGATG TGGAACCAGT GCATCCCCTT CGGTGTGCTT 
GAGAGACTCA TTCAGCAGGA CAGCCGCATC CTATTGCACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006798109.1
CDS	142..3903
Translation	MMAGVTENVYGTATWDIDGITGIKDTVESHCDVKMLEVNPNPIAVPLDLADLLIDDLADDINEKLLDVDSLFDYLELTDSLPHPWTFDDLPTAAEVPIANSIEQIQEPKAKGQSRRRKRQRDSQPQLCSDESPKAKRPKPSGQPKTKVSQAEPAVEPGSDPASGPSPAETLPMSTATPPRIFRVYPSQTSSAIPIQFITISDSAGNPVQLSPPPPLIRFPLPGSATTPTYILVPTVSPPPKCQLPPLSPVGGTVAPVQMSSSPLGSLSEAASKAMSPTCTSPVSPGNEMSPCKESPLPQSPKVLNIPQNVKDYIQEAKAHMSQTYQDMEAGLSLSSHYVDVQVSQREVVRSGKNTNKCLDKELVIKGDTDRQKTMLALSQIFDGSNGEKSRRYILLLGNAGMGKTTLIKKLCIDWSRDCIPQFDFVFLLDGKKLSVTEPVYSLQTLLLNLSSSAPSCVDPEAVYAQILAAPKRVLIIFDGFDELRNYETLLQAQEKDLTASLQKDSKAKTFTVRQLYSAILQRVLLPGCTLLLSTRPRGTASQLLRRTDSLLEMCGFTPANVETYLSQYFSDPGLRESALESLKSMSYLNLLCWNPGLCRLVCLILEQSRSVDVLPRTLTGLCHQVLCLKMDKDGRSTPTHTEAQAQSIRDTETQISNTSQAKKCSKNNQAKSRTQARTSSRTQRAKKAQKQEAQVDKVDQDLRSSGGEVVTEDFDLLSQLSSLAWEGVKANSSILPTGRDISGKVKAFGLRTGLFLSHQLRASPCLSNSTKEEGENETEAGETEQRTENSERTTNDLTDHQNDQILLWANPFLQSYIAGVHLALSRTLTDRSFLQTLPFQSGGKGRRRPQREELELTQRFAVGLLFHNRTELQRFHTHTETAFRDMVANKQGLVTKHLEGLSYADLTPSQILEACHYVYEASFTYSDGGREAGRTRLGTHLAANLPEFLTFHGVQLSPPDVFTVQKALEQGGTEGRSFCLDLEDSGIQICGLQALVGLNNINTYRSCIADAITLWELLEQSDEESLLQRAVSKFTIHPLKAKQVCHIEHLEKLVNIHIHKRLSDSSSESHSILSEGVPAVKELHKLEFELGPDNGPLVLPKLWDLLPGLHNLQHLDLENSKIGDEGAEKLASALVSLPSLEILNLSQNCIGDEGVKTLAATLKDLPNLHCLSVYSNMISDEGAESLAAVLPHMASLTDLDVKFNKLTDVGAQSLGASLRNCTKVKTLRMWNQCIPFGVLERLIQQDSRILLH

Target ORF information:

RefSeq Version	XM_006798046.1
Organism	Neolamprologus brichardi
Definition	Neolamprologus brichardi MHC class II transactivator-like (LOC102778812), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006798046.1

ORF Insert Sequence:

ATGATGGCAG GGGTCACCGA AAATGTTTAT GGAACAGCAA CCTGGGACAT AGATGGAATA 
ACAGGCATAA AGGACACTGT GGAGTCACAC TGTGATGTCA AGATGCTGGA AGTGAATCCC 
AATCCCATCG CAGTCCCTTT GGACTTGGCG GATCTGTTGA TAGATGATTT GGCTGATGAT 
ATAAATGAAA AATTGCTGGA TGTTGATTCC CTCTTTGACT ACTTAGAACT CACCGACAGC 
CTTCCTCATC CGTGGACCTT TGATGACCTC CCCACAGCAG CTGAGGTACC CATCGCCAAC 
AGCATTGAGC AGATACAGGA ACCCAAAGCA AAAGGCCAAT CACGAAGGAG AAAAAGACAG 
AGAGATTCTC AGCCACAGCT GTGCTCCGAT GAAAGCCCCA AAGCAAAACG CCCAAAACCA 
TCAGGTCAAC CAAAAACCAA AGTGTCACAG GCTGAGCCAG CTGTTGAGCC AGGCAGTGAT 
CCCGCATCAG GGCCGAGTCC GGCAGAGACT TTACCGATGT CCACCGCCAC TCCACCAAGG 
ATTTTTCGCG TCTACCCTTC CCAAACAAGC TCTGCGATTC CCATTCAGTT TATCACTATC 
TCAGATTCCG CAGGAAATCC AGTCCAGCTT TCTCCTCCTC CTCCGCTCAT TAGGTTTCCA 
CTCCCCGGCA GCGCCACTAC ACCTACATAT ATATTAGTTC CTACTGTGTC ACCACCCCCC 
AAATGCCAAT TACCACCACT CTCCCCAGTC GGTGGCACAG TCGCTCCGGT CCAAATGAGT 
TCGTCCCCAC TGGGTTCTCT GTCAGAAGCA GCTAGCAAAG CCATGTCTCC CACTTGTACC 
TCACCTGTAT CCCCAGGCAA TGAAATGTCT CCATGTAAGG AATCACCTCT TCCTCAGTCT 
CCCAAGGTCC TTAATATTCC ACAGAATGTC AAGGACTACA TTCAAGAAGC CAAAGCTCAC 
ATGAGTCAAA CCTACCAGGA TATGGAGGCG GGCCTCAGCC TGTCTTCTCA TTATGTAGAT 
GTTCAAGTGA GCCAAAGAGA GGTAGTTCGC TCTGGGAAAA ATACAAACAA ATGCCTGGAC 
AAGGAGCTAG TCATCAAGGG AGACACAGAT AGGCAAAAAA CCATGCTGGC ACTGAGTCAG 
ATCTTTGATG GTTCAAATGG AGAAAAATCC AGACGGTACA TTTTGCTGCT TGGCAATGCC 
GGCATGGGAA AAACCACTCT GATCAAGAAG CTGTGTATTG ATTGGTCCAG AGACTGCATC 
CCTCAGTTTG ACTTTGTATT CCTATTAGAT GGCAAAAAGC TCAGTGTGAC AGAGCCGGTC 
TACAGTCTTC AGACACTCCT GCTCAACCTC TCCTCCTCTG CCCCATCCTG TGTGGACCCA 
GAAGCAGTGT ATGCTCAAAT CCTGGCAGCC CCTAAGCGTG TGCTCATCAT TTTTGATGGT 
TTTGATGAAT TGCGGAACTA TGAAACTCTA CTTCAAGCTC AGGAAAAAGA CCTAACAGCT 
TCACTGCAAA AAGACAGCAA GGCAAAGACT TTCACAGTGA GGCAGTTGTA TTCTGCCATT 
CTTCAAAGGG TCCTGCTTCC AGGCTGCACT CTTCTACTCT CCACCCGGCC ACGGGGAACT 
GCCAGCCAGC TGCTCAGGCG TACAGACAGC CTTCTGGAGA TGTGTGGGTT TACCCCAGCA 
AATGTGGAAA CATATTTGTC CCAGTACTTC TCTGATCCTG GCCTCAGAGA ATCAGCTTTG 
GAGAGTCTAA AAAGCATGAG CTACCTAAAT CTTCTTTGCT GGAACCCCGG ACTATGCCGG 
CTGGTGTGCT TGATTTTAGA GCAGTCTAGA AGTGTGGATG TCCTACCAAG AACTTTAACT 
GGGCTCTGTC ATCAGGTGCT GTGTTTAAAA ATGGATAAAG ACGGCAGGAG TACTCCCACG 
CACACCGAAG CTCAAGCACA ATCCATAAGA GACACTGAGA CACAAATTTC AAATACCTCT 
CAGGCGAAGA AGTGTTCGAA AAATAATCAG GCGAAGTCCA GAACGCAGGC ACGCACTTCC 
TCTCGCACCC AAAGGGCAAA AAAGGCACAA AAACAGGAGG CGCAAGTAGA CAAAGTGGAT 
CAGGATCTCA GGAGCAGTGG CGGAGAAGTC GTAACGGAGG ACTTTGACTT GTTGTCCCAG 
CTGAGCTCTT TGGCCTGGGA AGGGGTCAAA GCCAACTCTT CCATCCTTCC CACAGGACGG 
GACATATCTG GCAAAGTCAA GGCATTTGGT CTGAGAACAG GCCTCTTTCT CTCTCATCAG 
CTGAGAGCGA GTCCATGCCT CTCAAATAGT ACCAAGGAGG AAGGAGAAAA TGAGACAGAA 
GCTGGAGAGA CAGAACAGAG GACTGAAAAC AGTGAAAGGA CCACCAATGA TTTAACTGAT 
CACCAAAATG ACCAGATCCT CTTGTGGGCC AACCCTTTCC TTCAGAGTTA CATTGCAGGA 
GTACATCTGG CTTTGTCAAG GACTTTAACA GACCGGTCCT TTCTCCAGAC TCTCCCTTTC 
CAGTCTGGAG GGAAAGGTCG TCGGCGACCT CAAAGGGAGG AACTTGAGCT CACTCAGCGA 
TTTGCAGTTG GCCTCTTGTT CCACAATAGG ACAGAACTGC AGCGATTCCA CACGCATACA 
GAGACAGCCT TTAGAGATAT GGTGGCTAAC AAGCAGGGGT TGGTAACAAA ACACCTGGAA 
GGGCTTTCTT ACGCTGACCT TACTCCCTCC CAAATCTTGG AGGCATGCCA CTACGTCTAC 
GAGGCGAGTT TTACGTACAG TGATGGTGGC CGAGAAGCTG GCAGGACTCG GCTGGGGACA 
CACCTGGCAG CAAATCTTCC AGAGTTCCTG ACGTTTCATG GAGTTCAACT AAGCCCGCCA 
GATGTGTTCA CTGTTCAGAA AGCACTTGAA CAGGGGGGAA CTGAAGGCAG AAGTTTCTGT 
TTGGACCTGG AGGACTCTGG CATCCAGATC TGTGGACTTC AAGCTCTGGT TGGCCTCAAC 
AACATCAACA CATACAGGTC ATGCATTGCT GACGCCATCA CCCTCTGGGA GCTGCTGGAG 
CAGAGTGACG AAGAAAGTCT CCTCCAGAGG GCAGTGTCCA AGTTCACAAT CCATCCTTTG 
AAAGCTAAAC AGGTGTGTCA TATAGAGCAC CTGGAAAAGC TGGTGAACAT ACACATTCAC 
AAGAGGCTAT CAGACAGCTC CAGCGAGTCT CACTCCATCC TGTCTGAGGG CGTGCCAGCA 
GTTAAAGAGC TACACAAGCT GGAGTTTGAA CTTGGTCCAG ATAATGGTCC TCTGGTTCTT 
CCGAAGCTGT GGGATCTCCT GCCAGGGCTG CATAACCTAC AGCACTTGGA CTTAGAGAAC 
AGCAAGATCG GGGACGAAGG AGCAGAGAAG CTGGCCAGTG CTTTAGTCTC ACTCCCTTCT 
TTGGAGATAC TTAATCTATC ACAGAACTGC ATAGGAGACG AGGGTGTGAA GACGTTAGCA 
GCCACACTGA AGGACCTGCC TAATCTGCAC TGTTTAAGTG TCTACAGCAA CATGATTTCT 
GATGAAGGGG CAGAGAGTTT AGCAGCTGTT CTCCCACACA TGGCTTCCCT CACTGACCTT 
GACGTAAAGT TTAACAAACT AACAGATGTC GGCGCACAGA GCTTAGGAGC CAGCCTAAGA 
AACTGTACAA AAGTTAAGAC TTTAAGGATG TGGAACCAGT GCATCCCCTT CGGTGTGCTT 
GAGAGACTCA TTCAGCAGGA CAGCCGCATC CTATTGCACT AA