The following Vps16 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Vps16 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OMu19693 | |
| Clone ID Related Accession (Same CDS sequence) | NM_030559.3 | |
| Accession Version | NM_030559.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2520bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-09-21 | |
| Organism | Mus musculus(house mouse) | |
| Product | vacuolar protein sorting-associated protein 16 homolog isoform 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY123989.1, AK049872.1, BX890605.4 and AK032558.1. On Jul 31, 2009 this sequence version replaced NM_030559.2. Transcript Variant: This variant (1) encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: SRR1660813.7769.1, AK049872.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGGACTGTT ACACTGCGAA CTGGAATCCA CTCGGGGACT CTGCCTTTTA CAGGAAGTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_085036.3 |
| CDS | 76..2595 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_030559.3 |
1 | ATGGACTGTT ACACTGCGAA CTGGAATCCA CTCGGGGACT CTGCCTTTTA CAGGAAGTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu31038 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006500430.3 | |
| Accession Version | XM_006500430.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2511bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-08-07 | |
| Organism | Mus musculus(house mouse) | |
| Product | vacuolar protein sorting-associated protein 16 homolog isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006500430.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACTGTT ACACTGCGAA CTGGAATCCA CTCGGGGACT CTGCCTTTTA CAGGAAGTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006500493.1 |
| CDS | 76..2586 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006500430.3 |
1 | ATGGACTGTT ACACTGCGAA CTGGAATCCA CTCGGGGACT CTGCCTTTTA CAGGAAGTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu80474 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017319344.1 , NM_001362651.1 | |
| Accession Version | NM_001362651.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1644bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-23 | |
| Organism | Mus musculus(house mouse) | |
| Product | vacuolar protein sorting-associated protein 16 homolog isoform 2 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX890605.4. On Apr 24, 2018 this sequence version replaced XM_017319344.1. Transcript Variant: This variant (2) lacks an alternate exon compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660821.150717.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGGTGGTGG GCAATGCGCC TGAAAGCATC CAGTTTGTGC TCGATGAGGA CTCCTACTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001349580.1 |
| CDS | 887..2530 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001362651.1 |
1 | ATGGTGGTGG GCAATGCGCC TGAAAGCATC CAGTTTGTGC TCGATGAGGA CTCCTACTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu80473 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017319343.1 | |
| Accession Version | XM_017319343.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2736bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-21 | |
| Organism | Mus musculus(house mouse) | |
| Product | vacuolar protein sorting-associated protein 16 homolog isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACTGTT ACACTGCGAA CTGGAATCCA CTCGGGGACT CTGCCTTTTA CAGGAAGTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017174832.1 |
| CDS | 76..2811 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017319343.1 |
1 | ATGGACTGTT ACACTGCGAA CTGGAATCCA CTCGGGGACT CTGCCTTTTA CAGGAAGTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu80474 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017319344.1 , NM_001362651.1 | |
| Accession Version | XM_017319344.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1644bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-21 | |
| Organism | Mus musculus(house mouse) | |
| Product | vacuolar protein sorting-associated protein 16 homolog isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTGGTGG GCAATGCGCC TGAAAGCATC CAGTTTGTGC TCGATGAGGA CTCCTACTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017174833.1 |
| CDS | 818..2461 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017319344.1 |
1 | ATGGTGGTGG GCAATGCGCC TGAAAGCATC CAGTTTGTGC TCGATGAGGA CTCCTACTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Homozygous mutation of VPS16 gene is responsible for an autosomal recessive adolescent-onset primary dystonia. |
Mammalian CORVET is required for fusion and conversion of distinct early endosome subpopulations. |
UVRAG is required for virus entry through combinatorial interaction with the class C-Vps complex and SNAREs. |
Clathrin-dependent mechanisms modulate the subcellular distribution of class C Vps/HOPS tether subunits in polarized and nonpolarized cells. |
SPE-39 family proteins interact with the HOPS complex and function in lysosomal delivery. |
