Ssu72 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ssu72
Entrez Gene ID	68991
Full Name	Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
Synonyms	1190002E22Rik,1500011L16Rik,2610101M12Rik
General protein information	Preferred Names Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) Names RNA polymerase II subunit A C-terminal domain phosphatase SSU72 CTD phosphatase SSU72
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 4 Map Location: 4\|4 E2

mRNA and Protein(s)

mRNA	Protein	Name
NM_026899.3	NP_081175.2	RNA polymerase II subunit A C-terminal domain phosphatase SSU72
XM_011250329.1	XP_011248631.1	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	ssu72	NP_957022.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP011470	XP_317836.3
Schizosaccharomyces pombe (fission yeast)	ssu72	NP_594076.1
Oryza sativa (rice)	Os12g0168200	NP_001066253.1
Xenopus tropicalis (tropical clawed frog)	ssu72	NP_001016264.1
	SSU72	XP_001094964.1
Mus musculus (house mouse)	Ssu72	NP_081175.2
Gallus gallus (chicken)	SSU72	NP_001007876.1
Drosophila melanogaster (fruit fly)	Ssu72	NP_608342.1
Caenorhabditis elegans (roundworm)	ssup-72	NP_495386.3
Kluyveromyces lactis	KLLA0D19514g	XP_453928.1
Bos taurus (cattle)	SSU72	NP_001069817.1
Homo sapiens (human)	SSU72	NP_054907.1
Canis lupus familiaris (dog)	SSU72	NP_001239254.1
Eremothecium gossypii	AGOS_ABL190W	NP_982757.1
Magnaporthe oryzae (rice blast fungus)	MGG_03704	XP_003716177.1
Neurospora crassa	NCU03114	XP_964973.1
Arabidopsis thaliana (thale cress)	AT1G73820	NP_177523.1
Pan troglodytes (chimpanzee)	SSU72	XP_001147261.1
Rattus norvegicus (Norway rat)	Ssu72	NP_001020828.1
Saccharomyces cerevisiae (baker's yeast)	SSU72	NP_014177.1

Gene Ontology
Bibliography

Related articles in PubMed

The essential N terminus of the Pta1 scaffold protein is required for snoRNA transcription termination and Ssu72 function but is dispensable for pre-mRNA 3'-end processing.
Ghazy MA, He X, Singh BN, Hampsey M, Moore C
Molecular and cellular biology29(8)2296-307(2009 Apr)

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

the amino terminus of Pta1 has an inhibitory effect and that this effect can be neutralized through the interaction with Ssu72.
Title: The essential N terminus of the Pta1 scaffold protein is required for snoRNA transcription termination and Ssu72 function but is dispensable for pre-mRNA 3'-end processing.

The following Ssu72 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ssu72 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu03242	NM_026899.3 Latest version!	Mus musculus Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
OMu70364	XM_011250329.1 Latest version!	Mus musculus Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ssu72 ( NM_026899.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_081175.2 Mus musculus Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), mRNA.

Price & Availability↑

CloneID	OMu03242
Clone ID Related Accession (Same CDS sequence)	NM_026899.3
Accession Version	NM_026899.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 585bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-18
Organism	Mus musculus(house mouse)
Product	RNA polymerase II subunit A C-terminal domain phosphatase SSU72
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY237911.1, BB867926.1, AK019168.1 and BU842478.1. On Apr 5, 2008 this sequence version replaced NM_026899.2. ##Evidence-Data-START## Transcript exon combination :: AK005220.1, BY705398.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END##

ATGCCGTCAT CGCCGCTGCG GGTGGCGGTG GTGTGCTCGA GTAACCAGAA TCGGAGCATG 
GAAGCACACA ACATCCTCAG CAAGCGAGGT TTCAGTGTCC GCTCCTTTGG AACAGGAACT 
CATGTGAAGC TCCCAGGACC AGCACCTGAC AAGCCCAATG TTTATGACTT CAAAACCACA 
TATGACCAGA TGTACAATGA CCTCCTCAGG AAAGACAAAG AACTCTATAC ACAAAATGGA 
ATTTTACATA TGTTGGACAG AAATAAAAGG ATCAAGCCCC GTCCAGAAAG GTTCCAGAAC 
TGCACGGACC TGTTTGACTT GATCCTCACT TGTGAAGAGA GAGTCTATGA CCAGGTTGTA 
GAAGATCTGA ACTCCAGAGA ACAGGAGACC TGCCAGCCAG TGCATGTGGT CAATGTGGAC 
ATCCAGGACA ACCATGAAGA GGCCACTCTG GGAGCATTCC TTATCTGCGA GCTCTGCCAG 
TGTATCCAGC ACACTGAGGA CATGGAGAAT GAAATCGACG AGCTGCTGCA GGAGTTCGAG 
GAGAAGAGTG GCCGGGCCTT TCTGCATACT GTCTGCTTCT ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_081175.2
CDS	568..1152
Translation	MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCTDLFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY

Target ORF information:

RefSeq Version	NM_026899.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_026899.3

ORF Insert Sequence:

ATGCCGTCAT CGCCGCTGCG GGTGGCGGTG GTGTGCTCGA GTAACCAGAA TCGGAGCATG 
GAAGCACACA ACATCCTCAG CAAGCGAGGT TTCAGTGTCC GCTCCTTTGG AACAGGAACT 
CATGTGAAGC TCCCAGGACC AGCACCTGAC AAGCCCAATG TTTATGACTT CAAAACCACA 
TATGACCAGA TGTACAATGA CCTCCTCAGG AAAGACAAAG AACTCTATAC ACAAAATGGA 
ATTTTACATA TGTTGGACAG AAATAAAAGG ATCAAGCCCC GTCCAGAAAG GTTCCAGAAC 
TGCACGGACC TGTTTGACTT GATCCTCACT TGTGAAGAGA GAGTCTATGA CCAGGTTGTA 
GAAGATCTGA ACTCCAGAGA ACAGGAGACC TGCCAGCCAG TGCATGTGGT CAATGTGGAC 
ATCCAGGACA ACCATGAAGA GGCCACTCTG GGAGCATTCC TTATCTGCGA GCTCTGCCAG 
TGTATCCAGC ACACTGAGGA CATGGAGAAT GAAATCGACG AGCTGCTGCA GGAGTTCGAG 
GAGAAGAGTG GCCGGGCCTT TCTGCATACT GTCTGCTTCT ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ssu72 ( XM_011250329.1 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_011248631.1 Mus musculus Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMu70364
Clone ID Related Accession (Same CDS sequence)	XM_011250329.1
Accession Version	XM_011250329.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Mus musculus(house mouse)
Product	RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCGTCAT CGCCGCTGCG GGTGGCGGTG GTGTGCTCGA GTAACCAGAA TCGGAGCATG 
GAAGCACACA ACATCCTCAG CAAGCGAGGT TTCAGTGTCC GCTCCTTTGG AACAGGAACT 
CATGTGAAGC TCCCAGGACC AGCACCTGAC AAGCCCAATG TTTATGACTT CAAAACCACA 
TATGACCAGA TGTACAATGA CCTCCTCAGG AAAGACAAAG AACTCTCCTT GACTCTGGTG 
TTCAGCTATA CACAAAATGG AATTTTACAT ATGTTGGACA GAAATAAAAG GATCAAGCCC 
CGTCCAGAAA GGTTCCAGAA CTGCACGGAC CTGTTTGACT TGATCCTCAC TTGTGAAGAG 
AGAGTCTATG ACCAGGTTGT AGAAGATCTG AACTCCAGAG AACAGGAGAC CTGCCAGCCA 
GTGCATGTGG TCAATGTGGA CATCCAGGAC AACCATGAAG AGGCCACTCT GGGAGCATTC 
CTTATCTGCG AGCTCTGCCA GTGTATCCAG CACACTGAGG ACATGGAGAA TGAAATCGAC 
GAGCTGCTGC AGGAGTTCGA GGAGAAGAGT GGCCGGGCCT TTCTGCATAC TGTCTGCTTC 
TACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011248631.1
CDS	578..1183
Translation	MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELSLTLVFSYTQNGILHMLDRNKRIKPRPERFQNCTDLFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY

Target ORF information:

RefSeq Version	XM_011250329.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011250329.1

ORF Insert Sequence:

ATGCCGTCAT CGCCGCTGCG GGTGGCGGTG GTGTGCTCGA GTAACCAGAA TCGGAGCATG 
GAAGCACACA ACATCCTCAG CAAGCGAGGT TTCAGTGTCC GCTCCTTTGG AACAGGAACT 
CATGTGAAGC TCCCAGGACC AGCACCTGAC AAGCCCAATG TTTATGACTT CAAAACCACA 
TATGACCAGA TGTACAATGA CCTCCTCAGG AAAGACAAAG AACTCTCCTT GACTCTGGTG 
TTCAGCTATA CACAAAATGG AATTTTACAT ATGTTGGACA GAAATAAAAG GATCAAGCCC 
CGTCCAGAAA GGTTCCAGAA CTGCACGGAC CTGTTTGACT TGATCCTCAC TTGTGAAGAG 
AGAGTCTATG ACCAGGTTGT AGAAGATCTG AACTCCAGAG AACAGGAGAC CTGCCAGCCA 
GTGCATGTGG TCAATGTGGA CATCCAGGAC AACCATGAAG AGGCCACTCT GGGAGCATTC 
CTTATCTGCG AGCTCTGCCA GTGTATCCAG CACACTGAGG ACATGGAGAA TGAAATCGAC 
GAGCTGCTGC AGGAGTTCGA GGAGAAGAGT GGCCGGGCCT TTCTGCATAC TGTCTGCTTC 
TACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The essential N terminus of the Pta1 scaffold protein is required for snoRNA transcription termination and Ssu72 function but is dispensable for pre-mRNA 3'-end processing.
Molecular and cellular biology29(8)2296-307(2009 Apr)
Ghazy MA,He X,Singh BN,Hampsey M,Moore C

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Nucleic acids research31(1)278-81(2003 Jan)
Stryke D,Kawamoto M,Huang CC,Johns SJ,King LA,Harper CA,Meng EC,Lee RE,Yee A,L'Italien L,Chuang PT,Young SG,Skarnes WC,Babbitt PC,Ferrin TE

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Ssu72 cDNA ORF clone, Mus musculus(house mouse)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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