Pudp cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pudp
Entrez Gene ID	67365
Full Name	pseudouridine 5-phosphatase
Synonyms	1700121L12Rik,GS1,Hdhd1,Hdhd1a
General protein information	Preferred Names pseudouridine 5-phosphatase Names pseudouridine-5'-phosphatase 5'-PsiMPase haloacid dehalogenase-like hydrolase domain containing 1A haloacid dehalogenase-like hydrolase domain-containing protein 1 haloacid dehalogenase-like hydrolase domain-containing protein 1A pseudouridine-5'-monophosphatase
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 18 Map Location: 18\|18 D1

mRNA and Protein(s)

mRNA	Protein	Name
NM_026108.3	NP_080384.2	pseudouridine-5'-phosphatase

Pathways from BioSystems

Homologies

	LOC693664	XP_001082121.2
Drosophila melanogaster (fruit fly)	Gs1l	NP_477228.1
Arabidopsis thaliana (thale cress)	GPP1	NP_567731.1
Danio rerio (zebrafish)	hdhd1	NP_001018451.1
Oryza sativa (rice)	Os08g0243600	NP_001061347.1
Mus musculus (house mouse)	Hdhd1a	NP_080384.2
Rattus norvegicus (Norway rat)	Hdhd1	NP_001099616.1
Arabidopsis thaliana (thale cress)	GS1	NP_568858.1
Xenopus tropicalis (tropical clawed frog)	hdhd1	NP_001011342.1
Homo sapiens (human)	HDHD1	NP_036212.3
	HDHD1	XP_001089095.1
Canis lupus familiaris (dog)	HDHD1	XP_853313.1
Bos taurus (cattle)	HDHD1	NP_001040060.1
Gallus gallus (chicken)	HDHD1	XP_416851.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003372	XP_314275.5

Gene Ontology
Bibliography

Related articles in PubMed

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pudp gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pudp cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu58426	NM_026108.3 Latest version!	Mus musculus pseudouridine 5'-phosphatase (Pudp), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$188.30 $269.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pudp ( NM_026108.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_080384.2 Mus musculus pseudouridine 5'-phosphatase (Pudp), mRNA.

Price & Availability↑

CloneID	OMu58426
Clone ID Related Accession (Same CDS sequence)	NM_026108.3
Accession Version	NM_026108.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 705bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-26
Organism	Mus musculus(house mouse)
Product	pseudouridine-5'-phosphatase
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CN834894.1 and AK014922.1. On Jan 19, 2008 this sequence version replaced NM_026108.2.

ATGGCGGCGG CAGTTCCTGT GCCCCAATTT CGACCAGTTA CACACCTGAT ATTTGACCTG 
GACGGACTTA TTCTGAATAC TGAAGATTTA TATACCGATG TGTTTGAAGA AATATGCAAT 
CGCTATGGGA AGAAATACAA CTGGGATGTT AAGTCCCTGG TCATGGGGAA GAAGGCTCTA 
GAAACCGCAC AGACCATAGT AGAGTTCCTC AATTTACCCA TATCCAAAGA AGAACTATTG 
AAAGAAAGTC AGGAGAAGCT GCAGATGGTG TTGCACACAG CTGGATTCAT GCCAGGAGCT 
GAGGAATTGA TCCACCACCT GAAGAAACAC CGCTTACCCT TTGCCCTGGC CACCAGCTCC 
GAGACCGTTA CCTTCCAAAC AAAGACCAGT AGACACACAG GATTCTTTGG TCTATTTCAC 
CACATCGTTC TGGGGGATGA TCCTGAAGTA AAGAATGGCA AGCCAGGCAT GGACATATTT 
CTAACCTGTG CCAAGAGGTT CTCTCCTCCC CCTGATCCAA AAGACTGCCT CGTCTTTGAA 
GATTCTCCAA ATGGAGTGGA GGCAGCCATC CACTGTGGGA TGCAGGTCGT CATGGTACCT 
CATGAAAACC TGAGCGCAGA CCTAACACGA AAAGCCACCC TGGTGCTGAG TTCCCTCCAC 
GACTTCAAGC CTGAACTGTT TGGTCTACCT GCCTTTACGG AATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_080384.2
CDS	40..744
Translation	MAAAVPVPQFRPVTHLIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPISKEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFTE

Target ORF information:

RefSeq Version	NM_026108.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus pseudouridine 5'-phosphatase (Pudp), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_026108.3

ORF Insert Sequence:

ATGGCGGCGG CAGTTCCTGT GCCCCAATTT CGACCAGTTA CACACCTGAT ATTTGACCTG 
GACGGACTTA TTCTGAATAC TGAAGATTTA TATACCGATG TGTTTGAAGA AATATGCAAT 
CGCTATGGGA AGAAATACAA CTGGGATGTT AAGTCCCTGG TCATGGGGAA GAAGGCTCTA 
GAAACCGCAC AGACCATAGT AGAGTTCCTC AATTTACCCA TATCCAAAGA AGAACTATTG 
AAAGAAAGTC AGGAGAAGCT GCAGATGGTG TTGCACACAG CTGGATTCAT GCCAGGAGCT 
GAGGAATTGA TCCACCACCT GAAGAAACAC CGCTTACCCT TTGCCCTGGC CACCAGCTCC 
GAGACCGTTA CCTTCCAAAC AAAGACCAGT AGACACACAG GATTCTTTGG TCTATTTCAC 
CACATCGTTC TGGGGGATGA TCCTGAAGTA AAGAATGGCA AGCCAGGCAT GGACATATTT 
CTAACCTGTG CCAAGAGGTT CTCTCCTCCC CCTGATCCAA AAGACTGCCT CGTCTTTGAA 
GATTCTCCAA ATGGAGTGGA GGCAGCCATC CACTGTGGGA TGCAGGTCGT CATGGTACCT 
CATGAAAACC TGAGCGCAGA CCTAACACGA AAAGCCACCC TGGTGCTGAG TTCCCTCCAC 
GACTTCAAGC CTGAACTGTT TGGTCTACCT GCCTTTACGG AATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Briefings in bioinformatics12(5)449-62(2011 Sep)
Gaudet P,Livstone MS,Lewis SE,Thomas PD