Hif3a cDNA ORF clone, Mus musculus(house mouse)

The following Hif3a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hif3a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu08627 NM_001162950.1
Latest version!
Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $391.30
$559.00
OMu10699 NM_016868.3
Latest version!
Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $391.30
$559.00
OMu69486 XM_011250628.3
Latest version!
Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OMu69486 XM_011250628.2 Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $307.30
$439.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OMu69486
    Clone ID Related Accession (Same CDS sequence) XM_011250628.2 , XM_011250628.3
    Accession Version XM_011250628.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1827bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-21
    Organism Mus musculus(house mouse)
    Product hypoxia-inducible factor 3-alpha isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011250628.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCGCCTCA CAATCAGCTA CCTGCGCATG CACCGCCTCT GCGCAGCAGG GGAGTGGAAC 
    CAGGTGGAAA AAGGGGGAGA GCCACTGGAC GCCTGCTACC TGAAGGCCCT GGAGGGTTTC
    GTCATGGTAC TCACCGCCGA GGGAGACATG GCTTACCTGT CGGAAAATGT CAGCAAGCAC
    CTGGGCCTCA GTCAGCTGGA GCTCATTGGA CACAGTATCT TTGATTTTAT CCATCCCTGT
    GACCAAGAGG AACTTCAAGA CGCCCTGACC CCCAGGCCGA ACCTGTCAAA GAAGAAGCTG
    GAAGCCCCAA CAGAGCGCCA CTTTTCCCTG CGAATGAAGA GCACGCTCAC CAGCAGAGGG
    CGCACGCTCA ACCTCAAAGC GGCCACCTGG AAGGTGCTGC ACTGCTCAGG ACATATGAGG
    GCCTACAAGC CCCCTGCACA GACTTCCCCT GCCGGGAGCC CTCGCTCCGA GCCTCCCCTG
    CAATGCCTGG TGCTTATCTG TGAAGCCATC CCCCACCCAG CCAGTCTGGA GCCCCCGCTG
    GGCCGAGGGG CCTTTCTCAG TCGCCACAGC CTGGACATGA AGTTCACATA CTGCGACGAG
    AGGATTGCAG AAGTTGCTGG CTACAGTCCT GATGACCTGA TTGGCTGTTC TGCCTATGAA
    TACATCCACG CTTTGGACTC TGATGCGGTC AGCAGGAGCA TCCACACTTT GTTGAGCAAG
    GGCCAGGCAG TAACGGGGCA GTATCGCTTC CTGGCCCGGA CTGGAGGCTA TCTGTGGACT
    CAGACTCAGG CTACAGTGGT GTCAGGGGGG CGGGGCCCCC AGTCGGAAAG TATCATCTGC
    GTCCACTTCC TGATCAGCCG TGTAGAAGAG ACCGGAGTGG TGCTGTCTCT GGAACAAACG
    GAGCAACATA CTCGCAGACC CCCTCGGCTG AGTGCCTCCT CGCAGAAGGG TATCCCTGGC
    AACAGTGTAG ACTCTCCTGC TCCGCGGATC CTGGCCTTCC TGCACCCTCC GGCCCTGAGT
    GAGGCCTCCC TGGCTGCTGA CCCTCGCCGT TTCTGTAGTC CAGACCTGCG CCGCCTCATG
    GCACCCATCC TGGATGGACC TCCCCCAGCT GCCACGCCCA GCACCCCACA AGCTACACGG
    AGACCCCAAA GTCCTCTTCC GGCTGATCTC CCAGATAAGT TGACAGTGGG CTTGGAAAAT
    GCGCACAGAC TCTCCACTGC CCAGAAAAAC AAGACCGTGG AGACAGATCT AGATATAGCT
    CAGGACCCTG ACACTCTGGA CTTGGAGATG CTGGCCCCCT ACATCTCCAT GGATGATGAC
    TTCCAGCTCA ACTCCAGCGA GCAATTGCCC AAAGTCCACC GCAGACCTCC CAGGGTGGCC
    CGCAGGCCCC GTGCTCGGAG CTTCCATGGC CTGTCGCCTC CTATCCCTGA GCCCTCCCTA
    CTACCCCGCT GGGGGAGTGA TCCACGACTG AACTGTTCCA GTCCTTCCAG GGGCGATCGC
    CCCACAGCCT CCCTGATGCC TGGAACTCGG AAGAGGGCCT TGGCCCAGAG CTCAGAGGAC
    AAAGGGTTGG AGCTGCTGGA AACTAAGCCG CCCAAGCGGT CCCCAAGACT AGAACCTGGA
    AGCTTCCTGC TGCCTCCGCT CAGCCTGAGT TTCCTTCTGC AAGGTCGACA ACTCCCGGGG
    AACCAGCAGG ATCCCAGAGC CCCCCTCGTG CATTCTCATG AGCCCTTGGG CCTAGCTCCC
    TCGCTGCTCT CTCTCTGCCA GCATGAGGAA ACTGTCCAGC CCAGGAACCG CTTCCCGCCA
    GCAGCAGGCT TGGGCCAGAC CCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_011248930.1
    CDS1001..2827
    Translation

    Target ORF information:

    RefSeq Version XM_011250628.2
    Organism Mus musculus(house mouse)
    Definition Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_011250628.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCGCCTCA CAATCAGCTA CCTGCGCATG CACCGCCTCT GCGCAGCAGG GGAGTGGAAC 
    CAGGTGGAAA AAGGGGGAGA GCCACTGGAC GCCTGCTACC TGAAGGCCCT GGAGGGTTTC
    GTCATGGTAC TCACCGCCGA GGGAGACATG GCTTACCTGT CGGAAAATGT CAGCAAGCAC
    CTGGGCCTCA GTCAGCTGGA GCTCATTGGA CACAGTATCT TTGATTTTAT CCATCCCTGT
    GACCAAGAGG AACTTCAAGA CGCCCTGACC CCCAGGCCGA ACCTGTCAAA GAAGAAGCTG
    GAAGCCCCAA CAGAGCGCCA CTTTTCCCTG CGAATGAAGA GCACGCTCAC CAGCAGAGGG
    CGCACGCTCA ACCTCAAAGC GGCCACCTGG AAGGTGCTGC ACTGCTCAGG ACATATGAGG
    GCCTACAAGC CCCCTGCACA GACTTCCCCT GCCGGGAGCC CTCGCTCCGA GCCTCCCCTG
    CAATGCCTGG TGCTTATCTG TGAAGCCATC CCCCACCCAG CCAGTCTGGA GCCCCCGCTG
    GGCCGAGGGG CCTTTCTCAG TCGCCACAGC CTGGACATGA AGTTCACATA CTGCGACGAG
    AGGATTGCAG AAGTTGCTGG CTACAGTCCT GATGACCTGA TTGGCTGTTC TGCCTATGAA
    TACATCCACG CTTTGGACTC TGATGCGGTC AGCAGGAGCA TCCACACTTT GTTGAGCAAG
    GGCCAGGCAG TAACGGGGCA GTATCGCTTC CTGGCCCGGA CTGGAGGCTA TCTGTGGACT
    CAGACTCAGG CTACAGTGGT GTCAGGGGGG CGGGGCCCCC AGTCGGAAAG TATCATCTGC
    GTCCACTTCC TGATCAGCCG TGTAGAAGAG ACCGGAGTGG TGCTGTCTCT GGAACAAACG
    GAGCAACATA CTCGCAGACC CCCTCGGCTG AGTGCCTCCT CGCAGAAGGG TATCCCTGGC
    AACAGTGTAG ACTCTCCTGC TCCGCGGATC CTGGCCTTCC TGCACCCTCC GGCCCTGAGT
    GAGGCCTCCC TGGCTGCTGA CCCTCGCCGT TTCTGTAGTC CAGACCTGCG CCGCCTCATG
    GCACCCATCC TGGATGGACC TCCCCCAGCT GCCACGCCCA GCACCCCACA AGCTACACGG
    AGACCCCAAA GTCCTCTTCC GGCTGATCTC CCAGATAAGT TGACAGTGGG CTTGGAAAAT
    GCGCACAGAC TCTCCACTGC CCAGAAAAAC AAGACCGTGG AGACAGATCT AGATATAGCT
    CAGGACCCTG ACACTCTGGA CTTGGAGATG CTGGCCCCCT ACATCTCCAT GGATGATGAC
    TTCCAGCTCA ACTCCAGCGA GCAATTGCCC AAAGTCCACC GCAGACCTCC CAGGGTGGCC
    CGCAGGCCCC GTGCTCGGAG CTTCCATGGC CTGTCGCCTC CTATCCCTGA GCCCTCCCTA
    CTACCCCGCT GGGGGAGTGA TCCACGACTG AACTGTTCCA GTCCTTCCAG GGGCGATCGC
    CCCACAGCCT CCCTGATGCC TGGAACTCGG AAGAGGGCCT TGGCCCAGAG CTCAGAGGAC
    AAAGGGTTGG AGCTGCTGGA AACTAAGCCG CCCAAGCGGT CCCCAAGACT AGAACCTGGA
    AGCTTCCTGC TGCCTCCGCT CAGCCTGAGT TTCCTTCTGC AAGGTCGACA ACTCCCGGGG
    AACCAGCAGG ATCCCAGAGC CCCCCTCGTG CATTCTCATG AGCCCTTGGG CCTAGCTCCC
    TCGCTGCTCT CTCTCTGCCA GCATGAGGAA ACTGTCCAGC CCAGGAACCG CTTCCCGCCA
    GCAGCAGGCT TGGGCCAGAC CCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu08627
    Clone ID Related Accession (Same CDS sequence) NM_001162950.1
    Accession Version NM_001162950.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1995bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-04-15
    Organism Mus musculus(house mouse)
    Product hypoxia-inducible factor 3-alpha isoform 1
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC148976.3. Transcript Variant: This variant (1) encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AB289606.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164135 [ECO:0000348] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGGCGTTGG GGCTGCAGCG CGTGAGGTCG AACACCGAGC TGCGGAAGGA GAAGTCGCGG 
    GACGCGGCCC GCAGCCGGCG CAGCCAGGAG ACGGAGGTGC TGTACCAGCT GGCGCACACT
    CTGCCCTTTG CGCGCGGCGT CAGCGCGCAC CTGGACAAGG CCTCCATCAT GCGCCTCACA
    ATCAGCTACC TGCGCATGCA CCGCCTCTGC GCAGCAGGGG AGTGGAACCA GGTGGAAAAA
    GGGGGAGAGC CACTGGACGC CTGCTACCTG AAGGCCCTGG AGGGTTTCGT CATGGTACTC
    ACCGCCGAGG GAGACATGGC TTACCTGTCG GAAAATGTCA GCAAGCACCT GGGCCTCAGT
    CAGCTGGAGC TCATTGGACA CAGTATCTTT GATTTTATCC ATCCCTGTGA CCAAGAGGAA
    CTTCAAGACG CCCTGACCCC CAGGCCGAAC CTGTCAAAGA AGAAGCTGGA AGCCCCAACA
    GAGCGCCACT TTTCCCTGCG AATGAAGAGC ACGCTCACCA GCAGAGGGCG CACGCTCAAC
    CTCAAAGCGG CCACCTGGAA GGTGCTGCAC TGCTCAGGAC ATATGAGGGC CTACAAGCCC
    CCTGCACAGA CTTCCCCTGC CGGGAGCCCT CGCTCCGAGC CTCCCCTGCA ATGCCTGGTG
    CTTATCTGTG AAGCCATCCC CCACCCAGCC AGTCTGGAGC CCCCGCTGGG CCGAGGGGCC
    TTTCTCAGTC GCCACAGCCT GGACATGAAG TTCACATACT GCGACGAGAG GATTGCAGAA
    GTTGCTGGCT ACAGTCCTGA TGACCTGATT GGCTGTTCTG CCTATGAATA CATCCACGCT
    TTGGACTCTG ATGCGGTCAG CAGGAGCATC CACACTTTGT TGAGCAAGGG CCAGGCAGTA
    ACGGGGCAGT ATCGCTTCCT GGCCCGGACT GGAGGCTATC TGTGGACTCA GACTCAGGCT
    ACAGTGGTGT CAGGGGGGCG GGGCCCCCAG TCGGAAAGTA TCATCTGCGT CCACTTCCTG
    ATCAGCCGTG TAGAAGAGAC CGGAGTGGTG CTGTCTCTGG AACAAACGGA GCAACATACT
    CGCAGACCCC CTCGGCTGAG TGCCTCCTCG CAGAAGGGTA TCCCTGGCAA CAGTGTAGAC
    TCTCCTGCTC CGCGGATCCT GGCCTTCCTG CACCCTCCGG CCCTGAGTGA GGCCTCCCTG
    GCTGCTGACC CTCGCCGTTT CTGTAGTCCA GACCTGCGCC GCCTCATGGC ACCCATCCTG
    GATGGACCTC CCCCAGCTGC CACGCCCAGC ACCCCACAAG CTACACGGAG ACCCCAAAGT
    CCTCTTCCGG CTGATCTCCC AGATAAGTTG ACAGTGGGCT TGGAAAATGC GCACAGACTC
    TCCACTGCCC AGAAAAACAA GACCGTGGAG ACAGATCTAG ATATAGCTCA GGACCCTGAC
    ACTCTGGACT TGGAGATGCT GGCCCCCTAC ATCTCCATGG ATGATGACTT CCAGCTCAAC
    TCCAGCGAGC AATTGCCCAA AGTCCACCGC AGACCTCCCA GGGTGGCCCG CAGGCCCCGT
    GCTCGGAGCT TCCATGGCCT GTCGCCTCCT ATCCCTGAGC CCTCCCTACT ACCCCGCTGG
    GGGAGTGATC CACGACTGAA CTGTTCCAGT CCTTCCAGGG GCGATCGCCC CACAGCCTCC
    CTGATGCCTG GAACTCGGAA GAGGGCCTTG GCCCAGAGCT CAGAGGACAA AGGGTTGGAG
    CTGCTGGAAA CTAAGCCGCC CAAGCGGTCC CCAAGACTAG AACCTGGAAG CTTCCTGCTG
    CCTCCGCTCA GCCTGAGTTT CCTTCTGCAA GGTCGACAAC TCCCGGGGAA CCAGCAGGAT
    CCCAGAGCCC CCCTCGTGCA TTCTCATGAG CCCTTGGGCC TAGCTCCCTC GCTGCTCTCT
    CTCTGCCAGC ATGAGGAAAC TGTCCAGCCC AGGAACCGCT TCCCGCCAGC AGCAGGCTTG
    GGCCAGACCC ACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001156422.1
    CDS47..2041
    Translation

    Target ORF information:

    RefSeq Version NM_001162950.1
    Organism Mus musculus(house mouse)
    Definition Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001162950.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGGCGTTGG GGCTGCAGCG CGTGAGGTCG AACACCGAGC TGCGGAAGGA GAAGTCGCGG 
    GACGCGGCCC GCAGCCGGCG CAGCCAGGAG ACGGAGGTGC TGTACCAGCT GGCGCACACT
    CTGCCCTTTG CGCGCGGCGT CAGCGCGCAC CTGGACAAGG CCTCCATCAT GCGCCTCACA
    ATCAGCTACC TGCGCATGCA CCGCCTCTGC GCAGCAGGGG AGTGGAACCA GGTGGAAAAA
    GGGGGAGAGC CACTGGACGC CTGCTACCTG AAGGCCCTGG AGGGTTTCGT CATGGTACTC
    ACCGCCGAGG GAGACATGGC TTACCTGTCG GAAAATGTCA GCAAGCACCT GGGCCTCAGT
    CAGCTGGAGC TCATTGGACA CAGTATCTTT GATTTTATCC ATCCCTGTGA CCAAGAGGAA
    CTTCAAGACG CCCTGACCCC CAGGCCGAAC CTGTCAAAGA AGAAGCTGGA AGCCCCAACA
    GAGCGCCACT TTTCCCTGCG AATGAAGAGC ACGCTCACCA GCAGAGGGCG CACGCTCAAC
    CTCAAAGCGG CCACCTGGAA GGTGCTGCAC TGCTCAGGAC ATATGAGGGC CTACAAGCCC
    CCTGCACAGA CTTCCCCTGC CGGGAGCCCT CGCTCCGAGC CTCCCCTGCA ATGCCTGGTG
    CTTATCTGTG AAGCCATCCC CCACCCAGCC AGTCTGGAGC CCCCGCTGGG CCGAGGGGCC
    TTTCTCAGTC GCCACAGCCT GGACATGAAG TTCACATACT GCGACGAGAG GATTGCAGAA
    GTTGCTGGCT ACAGTCCTGA TGACCTGATT GGCTGTTCTG CCTATGAATA CATCCACGCT
    TTGGACTCTG ATGCGGTCAG CAGGAGCATC CACACTTTGT TGAGCAAGGG CCAGGCAGTA
    ACGGGGCAGT ATCGCTTCCT GGCCCGGACT GGAGGCTATC TGTGGACTCA GACTCAGGCT
    ACAGTGGTGT CAGGGGGGCG GGGCCCCCAG TCGGAAAGTA TCATCTGCGT CCACTTCCTG
    ATCAGCCGTG TAGAAGAGAC CGGAGTGGTG CTGTCTCTGG AACAAACGGA GCAACATACT
    CGCAGACCCC CTCGGCTGAG TGCCTCCTCG CAGAAGGGTA TCCCTGGCAA CAGTGTAGAC
    TCTCCTGCTC CGCGGATCCT GGCCTTCCTG CACCCTCCGG CCCTGAGTGA GGCCTCCCTG
    GCTGCTGACC CTCGCCGTTT CTGTAGTCCA GACCTGCGCC GCCTCATGGC ACCCATCCTG
    GATGGACCTC CCCCAGCTGC CACGCCCAGC ACCCCACAAG CTACACGGAG ACCCCAAAGT
    CCTCTTCCGG CTGATCTCCC AGATAAGTTG ACAGTGGGCT TGGAAAATGC GCACAGACTC
    TCCACTGCCC AGAAAAACAA GACCGTGGAG ACAGATCTAG ATATAGCTCA GGACCCTGAC
    ACTCTGGACT TGGAGATGCT GGCCCCCTAC ATCTCCATGG ATGATGACTT CCAGCTCAAC
    TCCAGCGAGC AATTGCCCAA AGTCCACCGC AGACCTCCCA GGGTGGCCCG CAGGCCCCGT
    GCTCGGAGCT TCCATGGCCT GTCGCCTCCT ATCCCTGAGC CCTCCCTACT ACCCCGCTGG
    GGGAGTGATC CACGACTGAA CTGTTCCAGT CCTTCCAGGG GCGATCGCCC CACAGCCTCC
    CTGATGCCTG GAACTCGGAA GAGGGCCTTG GCCCAGAGCT CAGAGGACAA AGGGTTGGAG
    CTGCTGGAAA CTAAGCCGCC CAAGCGGTCC CCAAGACTAG AACCTGGAAG CTTCCTGCTG
    CCTCCGCTCA GCCTGAGTTT CCTTCTGCAA GGTCGACAAC TCCCGGGGAA CCAGCAGGAT
    CCCAGAGCCC CCCTCGTGCA TTCTCATGAG CCCTTGGGCC TAGCTCCCTC GCTGCTCTCT
    CTCTGCCAGC ATGAGGAAAC TGTCCAGCCC AGGAACCGCT TCCCGCCAGC AGCAGGCTTG
    GGCCAGACCC ACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu10699
    Clone ID Related Accession (Same CDS sequence) NM_016868.3
    Accession Version NM_016868.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1989bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-27
    Organism Mus musculus(house mouse)
    Product hypoxia-inducible factor 3-alpha isoform 2
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC148976.3. On Jul 8, 2009 this sequence version replaced NM_016868.2. Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) has a shorter and distinct N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF060194.1, BC120587.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164135 [ECO:0000348] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGGACTGGG ACCAAGACAG GTCGAACACC GAGCTGCGGA AGGAGAAGTC GCGGGACGCG 
    GCCCGCAGCC GGCGCAGCCA GGAGACGGAG GTGCTGTACC AGCTGGCGCA CACTCTGCCC
    TTTGCGCGCG GCGTCAGCGC GCACCTGGAC AAGGCCTCCA TCATGCGCCT CACAATCAGC
    TACCTGCGCA TGCACCGCCT CTGCGCAGCA GGGGAGTGGA ACCAGGTGGA AAAAGGGGGA
    GAGCCACTGG ACGCCTGCTA CCTGAAGGCC CTGGAGGGTT TCGTCATGGT ACTCACCGCC
    GAGGGAGACA TGGCTTACCT GTCGGAAAAT GTCAGCAAGC ACCTGGGCCT CAGTCAGCTG
    GAGCTCATTG GACACAGTAT CTTTGATTTT ATCCATCCCT GTGACCAAGA GGAACTTCAA
    GACGCCCTGA CCCCCAGGCC GAACCTGTCA AAGAAGAAGC TGGAAGCCCC AACAGAGCGC
    CACTTTTCCC TGCGAATGAA GAGCACGCTC ACCAGCAGAG GGCGCACGCT CAACCTCAAA
    GCGGCCACCT GGAAGGTGCT GCACTGCTCA GGACATATGA GGGCCTACAA GCCCCCTGCA
    CAGACTTCCC CTGCCGGGAG CCCTCGCTCC GAGCCTCCCC TGCAATGCCT GGTGCTTATC
    TGTGAAGCCA TCCCCCACCC AGCCAGTCTG GAGCCCCCGC TGGGCCGAGG GGCCTTTCTC
    AGTCGCCACA GCCTGGACAT GAAGTTCACA TACTGCGACG AGAGGATTGC AGAAGTTGCT
    GGCTACAGTC CTGATGACCT GATTGGCTGT TCTGCCTATG AATACATCCA CGCTTTGGAC
    TCTGATGCGG TCAGCAGGAG CATCCACACT TTGTTGAGCA AGGGCCAGGC AGTAACGGGG
    CAGTATCGCT TCCTGGCCCG GACTGGAGGC TATCTGTGGA CTCAGACTCA GGCTACAGTG
    GTGTCAGGGG GGCGGGGCCC CCAGTCGGAA AGTATCATCT GCGTCCACTT CCTGATCAGC
    CGTGTAGAAG AGACCGGAGT GGTGCTGTCT CTGGAACAAA CGGAGCAACA TACTCGCAGA
    CCCCCTCGGC TGAGTGCCTC CTCGCAGAAG GGTATCCCTG GCAACAGTGT AGACTCTCCT
    GCTCCGCGGA TCCTGGCCTT CCTGCACCCT CCGGCCCTGA GTGAGGCCTC CCTGGCTGCT
    GACCCTCGCC GTTTCTGTAG TCCAGACCTG CGCCGCCTCA TGGCACCCAT CCTGGATGGA
    CCTCCCCCAG CTGCCACGCC CAGCACCCCA CAAGCTACAC GGAGACCCCA AAGTCCTCTT
    CCGGCTGATC TCCCAGATAA GTTGACAGTG GGCTTGGAAA ATGCGCACAG ACTCTCCACT
    GCCCAGAAAA ACAAGACCGT GGAGACAGAT CTAGATATAG CTCAGGACCC TGACACTCTG
    GACTTGGAGA TGCTGGCCCC CTACATCTCC ATGGATGATG ACTTCCAGCT CAACTCCAGC
    GAGCAATTGC CCAAAGTCCA CCGCAGACCT CCCAGGGTGG CCCGCAGGCC CCGTGCTCGG
    AGCTTCCATG GCCTGTCGCC TCCTATCCCT GAGCCCTCCC TACTACCCCG CTGGGGGAGT
    GATCCACGAC TGAACTGTTC CAGTCCTTCC AGGGGCGATC GCCCCACAGC CTCCCTGATG
    CCTGGAACTC GGAAGAGGGC CTTGGCCCAG AGCTCAGAGG ACAAAGGGTT GGAGCTGCTG
    GAAACTAAGC CGCCCAAGCG GTCCCCAAGA CTAGAACCTG GAAGCTTCCT GCTGCCTCCG
    CTCAGCCTGA GTTTCCTTCT GCAAGGTCGA CAACTCCCGG GGAACCAGCA GGATCCCAGA
    GCCCCCCTCG TGCATTCTCA TGAGCCCTTG GGCCTAGCTC CCTCGCTGCT CTCTCTCTGC
    CAGCATGAGG AAACTGTCCA GCCCAGGAAC CGCTTCCCGC CAGCAGCAGG CTTGGGCCAG
    ACCCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_058564.2
    CDS84..2072
    Translation

    Target ORF information:

    RefSeq Version NM_016868.3
    Organism Mus musculus(house mouse)
    Definition Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_016868.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGGACTGGG ACCAAGACAG GTCGAACACC GAGCTGCGGA AGGAGAAGTC GCGGGACGCG 
    GCCCGCAGCC GGCGCAGCCA GGAGACGGAG GTGCTGTACC AGCTGGCGCA CACTCTGCCC
    TTTGCGCGCG GCGTCAGCGC GCACCTGGAC AAGGCCTCCA TCATGCGCCT CACAATCAGC
    TACCTGCGCA TGCACCGCCT CTGCGCAGCA GGGGAGTGGA ACCAGGTGGA AAAAGGGGGA
    GAGCCACTGG ACGCCTGCTA CCTGAAGGCC CTGGAGGGTT TCGTCATGGT ACTCACCGCC
    GAGGGAGACA TGGCTTACCT GTCGGAAAAT GTCAGCAAGC ACCTGGGCCT CAGTCAGCTG
    GAGCTCATTG GACACAGTAT CTTTGATTTT ATCCATCCCT GTGACCAAGA GGAACTTCAA
    GACGCCCTGA CCCCCAGGCC GAACCTGTCA AAGAAGAAGC TGGAAGCCCC AACAGAGCGC
    CACTTTTCCC TGCGAATGAA GAGCACGCTC ACCAGCAGAG GGCGCACGCT CAACCTCAAA
    GCGGCCACCT GGAAGGTGCT GCACTGCTCA GGACATATGA GGGCCTACAA GCCCCCTGCA
    CAGACTTCCC CTGCCGGGAG CCCTCGCTCC GAGCCTCCCC TGCAATGCCT GGTGCTTATC
    TGTGAAGCCA TCCCCCACCC AGCCAGTCTG GAGCCCCCGC TGGGCCGAGG GGCCTTTCTC
    AGTCGCCACA GCCTGGACAT GAAGTTCACA TACTGCGACG AGAGGATTGC AGAAGTTGCT
    GGCTACAGTC CTGATGACCT GATTGGCTGT TCTGCCTATG AATACATCCA CGCTTTGGAC
    TCTGATGCGG TCAGCAGGAG CATCCACACT TTGTTGAGCA AGGGCCAGGC AGTAACGGGG
    CAGTATCGCT TCCTGGCCCG GACTGGAGGC TATCTGTGGA CTCAGACTCA GGCTACAGTG
    GTGTCAGGGG GGCGGGGCCC CCAGTCGGAA AGTATCATCT GCGTCCACTT CCTGATCAGC
    CGTGTAGAAG AGACCGGAGT GGTGCTGTCT CTGGAACAAA CGGAGCAACA TACTCGCAGA
    CCCCCTCGGC TGAGTGCCTC CTCGCAGAAG GGTATCCCTG GCAACAGTGT AGACTCTCCT
    GCTCCGCGGA TCCTGGCCTT CCTGCACCCT CCGGCCCTGA GTGAGGCCTC CCTGGCTGCT
    GACCCTCGCC GTTTCTGTAG TCCAGACCTG CGCCGCCTCA TGGCACCCAT CCTGGATGGA
    CCTCCCCCAG CTGCCACGCC CAGCACCCCA CAAGCTACAC GGAGACCCCA AAGTCCTCTT
    CCGGCTGATC TCCCAGATAA GTTGACAGTG GGCTTGGAAA ATGCGCACAG ACTCTCCACT
    GCCCAGAAAA ACAAGACCGT GGAGACAGAT CTAGATATAG CTCAGGACCC TGACACTCTG
    GACTTGGAGA TGCTGGCCCC CTACATCTCC ATGGATGATG ACTTCCAGCT CAACTCCAGC
    GAGCAATTGC CCAAAGTCCA CCGCAGACCT CCCAGGGTGG CCCGCAGGCC CCGTGCTCGG
    AGCTTCCATG GCCTGTCGCC TCCTATCCCT GAGCCCTCCC TACTACCCCG CTGGGGGAGT
    GATCCACGAC TGAACTGTTC CAGTCCTTCC AGGGGCGATC GCCCCACAGC CTCCCTGATG
    CCTGGAACTC GGAAGAGGGC CTTGGCCCAG AGCTCAGAGG ACAAAGGGTT GGAGCTGCTG
    GAAACTAAGC CGCCCAAGCG GTCCCCAAGA CTAGAACCTG GAAGCTTCCT GCTGCCTCCG
    CTCAGCCTGA GTTTCCTTCT GCAAGGTCGA CAACTCCCGG GGAACCAGCA GGATCCCAGA
    GCCCCCCTCG TGCATTCTCA TGAGCCCTTG GGCCTAGCTC CCTCGCTGCT CTCTCTCTGC
    CAGCATGAGG AAACTGTCCA GCCCAGGAAC CGCTTCCCGC CAGCAGCAGG CTTGGGCCAG
    ACCCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu69486
    Clone ID Related Accession (Same CDS sequence) XM_011250628.2 , XM_011250628.3
    Accession Version XM_011250628.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1827bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-08-07
    Organism Mus musculus(house mouse)
    Product hypoxia-inducible factor 3-alpha isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011250628.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCGCCTCA CAATCAGCTA CCTGCGCATG CACCGCCTCT GCGCAGCAGG GGAGTGGAAC 
    CAGGTGGAAA AAGGGGGAGA GCCACTGGAC GCCTGCTACC TGAAGGCCCT GGAGGGTTTC
    GTCATGGTAC TCACCGCCGA GGGAGACATG GCTTACCTGT CGGAAAATGT CAGCAAGCAC
    CTGGGCCTCA GTCAGCTGGA GCTCATTGGA CACAGTATCT TTGATTTTAT CCATCCCTGT
    GACCAAGAGG AACTTCAAGA CGCCCTGACC CCCAGGCCGA ACCTGTCAAA GAAGAAGCTG
    GAAGCCCCAA CAGAGCGCCA CTTTTCCCTG CGAATGAAGA GCACGCTCAC CAGCAGAGGG
    CGCACGCTCA ACCTCAAAGC GGCCACCTGG AAGGTGCTGC ACTGCTCAGG ACATATGAGG
    GCCTACAAGC CCCCTGCACA GACTTCCCCT GCCGGGAGCC CTCGCTCCGA GCCTCCCCTG
    CAATGCCTGG TGCTTATCTG TGAAGCCATC CCCCACCCAG CCAGTCTGGA GCCCCCGCTG
    GGCCGAGGGG CCTTTCTCAG TCGCCACAGC CTGGACATGA AGTTCACATA CTGCGACGAG
    AGGATTGCAG AAGTTGCTGG CTACAGTCCT GATGACCTGA TTGGCTGTTC TGCCTATGAA
    TACATCCACG CTTTGGACTC TGATGCGGTC AGCAGGAGCA TCCACACTTT GTTGAGCAAG
    GGCCAGGCAG TAACGGGGCA GTATCGCTTC CTGGCCCGGA CTGGAGGCTA TCTGTGGACT
    CAGACTCAGG CTACAGTGGT GTCAGGGGGG CGGGGCCCCC AGTCGGAAAG TATCATCTGC
    GTCCACTTCC TGATCAGCCG TGTAGAAGAG ACCGGAGTGG TGCTGTCTCT GGAACAAACG
    GAGCAACATA CTCGCAGACC CCCTCGGCTG AGTGCCTCCT CGCAGAAGGG TATCCCTGGC
    AACAGTGTAG ACTCTCCTGC TCCGCGGATC CTGGCCTTCC TGCACCCTCC GGCCCTGAGT
    GAGGCCTCCC TGGCTGCTGA CCCTCGCCGT TTCTGTAGTC CAGACCTGCG CCGCCTCATG
    GCACCCATCC TGGATGGACC TCCCCCAGCT GCCACGCCCA GCACCCCACA AGCTACACGG
    AGACCCCAAA GTCCTCTTCC GGCTGATCTC CCAGATAAGT TGACAGTGGG CTTGGAAAAT
    GCGCACAGAC TCTCCACTGC CCAGAAAAAC AAGACCGTGG AGACAGATCT AGATATAGCT
    CAGGACCCTG ACACTCTGGA CTTGGAGATG CTGGCCCCCT ACATCTCCAT GGATGATGAC
    TTCCAGCTCA ACTCCAGCGA GCAATTGCCC AAAGTCCACC GCAGACCTCC CAGGGTGGCC
    CGCAGGCCCC GTGCTCGGAG CTTCCATGGC CTGTCGCCTC CTATCCCTGA GCCCTCCCTA
    CTACCCCGCT GGGGGAGTGA TCCACGACTG AACTGTTCCA GTCCTTCCAG GGGCGATCGC
    CCCACAGCCT CCCTGATGCC TGGAACTCGG AAGAGGGCCT TGGCCCAGAG CTCAGAGGAC
    AAAGGGTTGG AGCTGCTGGA AACTAAGCCG CCCAAGCGGT CCCCAAGACT AGAACCTGGA
    AGCTTCCTGC TGCCTCCGCT CAGCCTGAGT TTCCTTCTGC AAGGTCGACA ACTCCCGGGG
    AACCAGCAGG ATCCCAGAGC CCCCCTCGTG CATTCTCATG AGCCCTTGGG CCTAGCTCCC
    TCGCTGCTCT CTCTCTGCCA GCATGAGGAA ACTGTCCAGC CCAGGAACCG CTTCCCGCCA
    GCAGCAGGCT TGGGCCAGAC CCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_011248930.1
    CDS485..2311
    Translation

    Target ORF information:

    RefSeq Version XM_011250628.3
    Organism Mus musculus(house mouse)
    Definition Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_011250628.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCGCCTCA CAATCAGCTA CCTGCGCATG CACCGCCTCT GCGCAGCAGG GGAGTGGAAC 
    CAGGTGGAAA AAGGGGGAGA GCCACTGGAC GCCTGCTACC TGAAGGCCCT GGAGGGTTTC
    GTCATGGTAC TCACCGCCGA GGGAGACATG GCTTACCTGT CGGAAAATGT CAGCAAGCAC
    CTGGGCCTCA GTCAGCTGGA GCTCATTGGA CACAGTATCT TTGATTTTAT CCATCCCTGT
    GACCAAGAGG AACTTCAAGA CGCCCTGACC CCCAGGCCGA ACCTGTCAAA GAAGAAGCTG
    GAAGCCCCAA CAGAGCGCCA CTTTTCCCTG CGAATGAAGA GCACGCTCAC CAGCAGAGGG
    CGCACGCTCA ACCTCAAAGC GGCCACCTGG AAGGTGCTGC ACTGCTCAGG ACATATGAGG
    GCCTACAAGC CCCCTGCACA GACTTCCCCT GCCGGGAGCC CTCGCTCCGA GCCTCCCCTG
    CAATGCCTGG TGCTTATCTG TGAAGCCATC CCCCACCCAG CCAGTCTGGA GCCCCCGCTG
    GGCCGAGGGG CCTTTCTCAG TCGCCACAGC CTGGACATGA AGTTCACATA CTGCGACGAG
    AGGATTGCAG AAGTTGCTGG CTACAGTCCT GATGACCTGA TTGGCTGTTC TGCCTATGAA
    TACATCCACG CTTTGGACTC TGATGCGGTC AGCAGGAGCA TCCACACTTT GTTGAGCAAG
    GGCCAGGCAG TAACGGGGCA GTATCGCTTC CTGGCCCGGA CTGGAGGCTA TCTGTGGACT
    CAGACTCAGG CTACAGTGGT GTCAGGGGGG CGGGGCCCCC AGTCGGAAAG TATCATCTGC
    GTCCACTTCC TGATCAGCCG TGTAGAAGAG ACCGGAGTGG TGCTGTCTCT GGAACAAACG
    GAGCAACATA CTCGCAGACC CCCTCGGCTG AGTGCCTCCT CGCAGAAGGG TATCCCTGGC
    AACAGTGTAG ACTCTCCTGC TCCGCGGATC CTGGCCTTCC TGCACCCTCC GGCCCTGAGT
    GAGGCCTCCC TGGCTGCTGA CCCTCGCCGT TTCTGTAGTC CAGACCTGCG CCGCCTCATG
    GCACCCATCC TGGATGGACC TCCCCCAGCT GCCACGCCCA GCACCCCACA AGCTACACGG
    AGACCCCAAA GTCCTCTTCC GGCTGATCTC CCAGATAAGT TGACAGTGGG CTTGGAAAAT
    GCGCACAGAC TCTCCACTGC CCAGAAAAAC AAGACCGTGG AGACAGATCT AGATATAGCT
    CAGGACCCTG ACACTCTGGA CTTGGAGATG CTGGCCCCCT ACATCTCCAT GGATGATGAC
    TTCCAGCTCA ACTCCAGCGA GCAATTGCCC AAAGTCCACC GCAGACCTCC CAGGGTGGCC
    CGCAGGCCCC GTGCTCGGAG CTTCCATGGC CTGTCGCCTC CTATCCCTGA GCCCTCCCTA
    CTACCCCGCT GGGGGAGTGA TCCACGACTG AACTGTTCCA GTCCTTCCAG GGGCGATCGC
    CCCACAGCCT CCCTGATGCC TGGAACTCGG AAGAGGGCCT TGGCCCAGAG CTCAGAGGAC
    AAAGGGTTGG AGCTGCTGGA AACTAAGCCG CCCAAGCGGT CCCCAAGACT AGAACCTGGA
    AGCTTCCTGC TGCCTCCGCT CAGCCTGAGT TTCCTTCTGC AAGGTCGACA ACTCCCGGGG
    AACCAGCAGG ATCCCAGAGC CCCCCTCGTG CATTCTCATG AGCCCTTGGG CCTAGCTCCC
    TCGCTGCTCT CTCTCTGCCA GCATGAGGAA ACTGTCCAGC CCAGGAACCG CTTCCCGCCA
    GCAGCAGGCT TGGGCCAGAC CCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.