Rrp9 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rrp9
Entrez Gene ID	27966
Full Name	RRP9, small subunit (SSU) processome component, homolog (yeast)
Synonyms	55kDa,D19435,D9Wsu10e,Rnu3ip2,U3-55k
General protein information	Preferred Names RRP9, small subunit (SSU) processome component, homolog (yeast) Names U3 small nucleolar RNA-interacting protein 2 RNA, U3 small nucleolar interacting protein 2 RRP9 homolog U3 small nucleolar ribonucleoprotein-associated 55 kDa protein U3 snoRNP-associated 55-kDa protein U3 snoRNP-associated protein
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 9 Map Location: 9 F1\|9 57.59 cM

mRNA and Protein(s)

mRNA	Protein	Name
NM_145620.4	NP_663595.1	U3 small nucleolar RNA-interacting protein 2

Pathways from BioSystems

Homologies

Homo sapiens (human)	RRP9	NP_004695.1
Rattus norvegicus (Norway rat)	Rrp9	NP_001102248.1
Gallus gallus (chicken)	RRP9	XP_414243.4
Danio rerio (zebrafish)	rrp9	NP_001112367.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005320	XP_315334.4
Xenopus tropicalis (tropical clawed frog)	rrp9	XP_002935676.2
Bos taurus (cattle)	RRP9	NP_001095743.1
Magnaporthe oryzae (rice blast fungus)	MGG_07030	XP_003715212.1
Canis lupus familiaris (dog)	RRP9	XP_003432867.2
Saccharomyces cerevisiae (baker's yeast)	RRP9	NP_015463.1
Arabidopsis thaliana (thale cress)	YAO	NP_192450.1
Caenorhabditis elegans (roundworm)	T02H6.1	NP_872030.2
Schizosaccharomyces pombe (fission yeast)	SPAC2E1P5.05	NP_594143.1
Oryza sativa (rice)	Os03g0625900	NP_001050698.1
Pan troglodytes (chimpanzee)	RRP9	XP_001170125.1
Mus musculus (house mouse)	Rrp9	NP_663595.1
Drosophila melanogaster (fruit fly)	U3-55K	NP_001014529.1
Kluyveromyces lactis	KLLA0B11077g	XP_452022.1
Eremothecium gossypii	AGOS_AAR102C	NP_982643.1
Neurospora crassa	NCU01367	XP_960719.1
Arabidopsis thaliana (thale cress)	EMB2271	NP_193845.2

Gene Ontology
Bibliography

Related articles in PubMed

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)

Cloning and expression of PARP-3 (Adprt3) and U3-55k, two genes closely linked on mouse chromosome 9.
Urb?nek P, Paces J, Kr?lov? J, Dvor?k M, Paces V
Folia biologica48(5)182-91(2002)

Ducky mouse phenotype of epilepsy and ataxia is associated with mutations in the Cacna2d2 gene and decreased calcium channel current in cerebellar Purkinje cells.
Barclay J, Balaguero N, Mione M, Ackerman SL, Letts VA, Brodbeck J, Canti C, Meir A, Page KM, Kusumi K, Perez-Reyes E, Lander ES, Frankel WN, Gardiner RM, Dolphin AC, Rees M
The Journal of neuroscience : the official journal of the Society for Neuroscience21(16)6095-104(2001 Aug)

Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome.
Ko MS, Threat TA, Wang X, Horton JH, Cui Y, Wang X, Pryor E, Paris J, Wells-Smith J, Kitchen JR, Rowe LB, Eppig J, Satoh T, Brant L, Fujiwara H, Yotsumoto S, Nakashima H
Human molecular genetics7(12)1967-78(1998 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

We cloned and sequenced the cDNAs of the mouse PARP-3 (Adprt3) gene encoding poly(ADP-ribose) polymerase 3 and of the closely linked U3-55k gene coding for the U3 small nucleolar ribonucleoprotein complex-associated 55-kilodalton protein.
Title: Cloning and expression of PARP-3 (Adprt3) and U3-55k, two genes closely linked on mouse chromosome 9.

The following Rrp9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rrp9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu11901	NM_145620.4 Latest version!	Mus musculus RRP9, small subunit (SSU) processome component, homolog (yeast) (Rrp9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rrp9 ( NM_145620.4 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_663595.1 Mus musculus RRP9, small subunit (SSU) processome component, homolog (yeast) (Rrp9), mRNA.

Price & Availability↑

CloneID	OMu11901
Clone ID Related Accession (Same CDS sequence)	NM_145620.4
Accession Version	NM_145620.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1428bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-23
Organism	Mus musculus(house mouse)
Product	U3 small nucleolar RNA-interacting protein 2
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC151729.6. On Mar 21, 2007 this sequence version replaced NM_145620.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC014703.1, AK076113.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END##

ATGTCGACCG CCGTGGCAAC TCGTAAGCGG GCAAAGCCAG CTCCCGGGCC CGGGGCGGCT 
CCGGTGGCCG GCAAGCGGCG GCGAAAGGTA GACTCTGCTG CGGACAGGGG CAAGTCCAAG 
GGTGGCGGCA AAATGAATGA AGAGATTTCC AGCGATTCTG AGAGCGAGAG CTTGGCTCCA 
AGGAAAACAG AGGAAGAGGA GGAGGAAGAG CTGGAAGAGA CCGCACAGGA AAAGAAGCTA 
CGCTTGGCCA AACTCTACCT TGAACAACTC AGGCAGCAAG AGGAGGAGAA GGCTGAAGCC 
CGTGCATTCG AGGAGGATCA GGTGGCCGGG CGCTTGAAGG AGGATGTGCT GGAGCAGAGA 
GGCAGGTTGC AGAAGTCGGT GGCCAAGGAG ATCCAGGCCC CAGCTCCCAC CGACATTCGA 
GTTTTGCGGG GCCACCAGCT CTCCATTACG TGCTTGGTCA TCACTCCTGA TGACCTGGCC 
ATCTTCTCCG CCGCCAAAGA CTGCACCATC ATCAAGTGGA GTGTAGAGAC TGGGCGGAAG 
CTGCATGTGA TCCCTCGAGC CAAGAAGGGT GCTCAGGGCC AGCCCGCAGG CCACAGCAGC 
CACGTCCTCT GCATGGCCAT CTCCTCTGAT GGCAAGTACC TCGCCTCTGG CGACCGCAGC 
AAGCTCATTC TCATTTGGGA GGCCCAGAGC TGCCAGCACC TGTACACCTT CACGGGACAC 
CGGGACGCTG TGTCGGGACT AGCCTTCCGA AAAGGTACCC ACCAGCTCTA CAGCACTTCC 
CACGACCGCT CTGTGAAGGT GTGGAATGCA GCCGAGAACT CCTACGTGGA GACGCTGTTC 
GGGCACCAGG ATGCTGTGGC TGCATTGGAT GCCCTGAGCC GAGAGTGCTG TGTGACAGCT 
GGGGGCCGGG ATGGGACCGT GCGTGTGTGG AAGATCCCCG AGGAGTCCCA GCTTGTCTTC 
TATGGCCACC AGGGTTCCAT TGACTGTATC CATCTCATCA ACGAGGAGCA CATGGTGTCG 
GGCGCAGATG ATGGCTCTGT GGCCTTGTGG GGCCTCTCCA AGAAACGGCC ACTCGCCCTC 
CAGCGCGAAG CTCATGGGCT TCACGGGGAG CCAGGCCTGG AGCAACCCTT CTGGGTGTCA 
TCCGTAGCCG CCCTGCTCAA TACAGACCTG GTGGCCACAG GCTCCCATAA TGCCCGTGTG 
CGACTTTGGC AGTGTGGAGA GGGCTTCCGG CAGCTTGACC CTCTCTGTGA CATCCCCCTG 
GTTGGTTTTA TCAACAGCCT CAAGTTCTCC AGTGCTGGGG ACTTCTTGGT GGCAGGCGTG 
GGACAGGAGC ACAGGCTTGG CCGGTGGTGG AGGATCAAAG AGGCCCGGAA CTCAGTCTGC 
ATCATCCCAC TCCGCAGGCT CCCTGTGTCC CCTGTTGCCG GCTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_663595.1
CDS	40..1467
Translation	MSTAVATRKRAKPAPGPGAAPVAGKRRRKVDSAADRGKSKGGGKMNEEISSDSESESLAPRKTEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRLQKSVAKEIQAPAPTDIRVLRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKGAQGQPAGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLHGEPGLEQPFWVSSVAALLNTDLVATGSHNARVRLWQCGEGFRQLDPLCDIPLVGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRLPVSPVAGS

Target ORF information:

RefSeq Version	NM_145620.4
Organism	Mus musculus(house mouse)
Definition	Mus musculus RRP9, small subunit (SSU) processome component, homolog (yeast) (Rrp9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_145620.4

ORF Insert Sequence:

ATGTCGACCG CCGTGGCAAC TCGTAAGCGG GCAAAGCCAG CTCCCGGGCC CGGGGCGGCT 
CCGGTGGCCG GCAAGCGGCG GCGAAAGGTA GACTCTGCTG CGGACAGGGG CAAGTCCAAG 
GGTGGCGGCA AAATGAATGA AGAGATTTCC AGCGATTCTG AGAGCGAGAG CTTGGCTCCA 
AGGAAAACAG AGGAAGAGGA GGAGGAAGAG CTGGAAGAGA CCGCACAGGA AAAGAAGCTA 
CGCTTGGCCA AACTCTACCT TGAACAACTC AGGCAGCAAG AGGAGGAGAA GGCTGAAGCC 
CGTGCATTCG AGGAGGATCA GGTGGCCGGG CGCTTGAAGG AGGATGTGCT GGAGCAGAGA 
GGCAGGTTGC AGAAGTCGGT GGCCAAGGAG ATCCAGGCCC CAGCTCCCAC CGACATTCGA 
GTTTTGCGGG GCCACCAGCT CTCCATTACG TGCTTGGTCA TCACTCCTGA TGACCTGGCC 
ATCTTCTCCG CCGCCAAAGA CTGCACCATC ATCAAGTGGA GTGTAGAGAC TGGGCGGAAG 
CTGCATGTGA TCCCTCGAGC CAAGAAGGGT GCTCAGGGCC AGCCCGCAGG CCACAGCAGC 
CACGTCCTCT GCATGGCCAT CTCCTCTGAT GGCAAGTACC TCGCCTCTGG CGACCGCAGC 
AAGCTCATTC TCATTTGGGA GGCCCAGAGC TGCCAGCACC TGTACACCTT CACGGGACAC 
CGGGACGCTG TGTCGGGACT AGCCTTCCGA AAAGGTACCC ACCAGCTCTA CAGCACTTCC 
CACGACCGCT CTGTGAAGGT GTGGAATGCA GCCGAGAACT CCTACGTGGA GACGCTGTTC 
GGGCACCAGG ATGCTGTGGC TGCATTGGAT GCCCTGAGCC GAGAGTGCTG TGTGACAGCT 
GGGGGCCGGG ATGGGACCGT GCGTGTGTGG AAGATCCCCG AGGAGTCCCA GCTTGTCTTC 
TATGGCCACC AGGGTTCCAT TGACTGTATC CATCTCATCA ACGAGGAGCA CATGGTGTCG 
GGCGCAGATG ATGGCTCTGT GGCCTTGTGG GGCCTCTCCA AGAAACGGCC ACTCGCCCTC 
CAGCGCGAAG CTCATGGGCT TCACGGGGAG CCAGGCCTGG AGCAACCCTT CTGGGTGTCA 
TCCGTAGCCG CCCTGCTCAA TACAGACCTG GTGGCCACAG GCTCCCATAA TGCCCGTGTG 
CGACTTTGGC AGTGTGGAGA GGGCTTCCGG CAGCTTGACC CTCTCTGTGA CATCCCCCTG 
GTTGGTTTTA TCAACAGCCT CAAGTTCTCC AGTGCTGGGG ACTTCTTGGT GGCAGGCGTG 
GGACAGGAGC ACAGGCTTGG CCGGTGGTGG AGGATCAAAG AGGCCCGGAA CTCAGTCTGC 
ATCATCCCAC TCCGCAGGCT CCCTGTGTCC CCTGTTGCCG GCTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Nucleic acids research31(1)278-81(2003 Jan)
Stryke D,Kawamoto M,Huang CC,Johns SJ,King LA,Harper CA,Meng EC,Lee RE,Yee A,L'Italien L,Chuang PT,Young SG,Skarnes WC,Babbitt PC,Ferrin TE

Cloning and expression of PARP-3 (Adprt3) and U3-55k, two genes closely linked on mouse chromosome 9.
Folia biologica48(5)182-91(2002)
Urb?nek P,Paces J,Kr?lov? J,Dvor?k M,Paces V

Ducky mouse phenotype of epilepsy and ataxia is associated with mutations in the Cacna2d2 gene and decreased calcium channel current in cerebellar Purkinje cells.
The Journal of neuroscience : the official journal of the Society for Neuroscience21(16)6095-104(2001 Aug)
Barclay J,Balaguero N,Mione M,Ackerman SL,Letts VA,Brodbeck J,Canti C,Meir A,Page KM,Kusumi K,Perez-Reyes E,Lander ES,Frankel WN,Gardiner RM,Dolphin AC,Rees M

Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome.
Human molecular genetics7(12)1967-78(1998 Nov)
Ko MS,Threat TA,Wang X,Horton JH,Cui Y,Wang X,Pryor E,Paris J,Wells-Smith J,Kitchen JR,Rowe LB,Eppig J,Satoh T,Brant L,Fujiwara H,Yotsumoto S,Nakashima H

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Rrp9 cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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