Ptpdc1 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ptpdc1
Entrez Gene ID	218232
Full Name	protein tyrosine phosphatase domain containing 1
Synonyms	AI843923,AW456874,Naa-1,Ptpcd1
General protein information	Preferred Names protein tyrosine phosphatase domain containing 1 Names protein tyrosine phosphatase domain-containing protein 1
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 13 Map Location: 13\|13 A5
Summary	The protein encoded by this gene is a centrosomal mitotic phosphatase. This protein has been implicated in centrosomal duplication and cytokinesis. In addition, knockdown of expression levels in non-cycling cells results in extra long cilia, suggesting that this protein may function in regulating cilia length independent of a function in cell cycle control. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2014].

mRNA and Protein(s)

mRNA	Protein	Name
XM_006516922.2	XP_006516985.1	protein tyrosine phosphatase domain-containing protein 1 isoform X1
NM_001374755.1	NP_001361684.1	protein tyrosine phosphatase domain-containing protein 1 isoform 3
NM_207232.2	NP_997115.1	protein tyrosine phosphatase domain-containing protein 1 isoform 2
NM_001301781.1	NP_001288710.1	protein tyrosine phosphatase domain-containing protein 1 isoform 1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	PTPDC1	XP_520702.2
Mus musculus (house mouse)	Ptpdc1	NP_997115.1
Gallus gallus (chicken)	PTPDC1	XP_004944600.1
Xenopus tropicalis (tropical clawed frog)	LOC100490857	XP_002943618.2
	PTPDC1	XP_001104435.2
Canis lupus familiaris (dog)	PTPDC1	XP_005616037.1
Rattus norvegicus (Norway rat)	Ptpdc1	NP_001099574.1
Bos taurus (cattle)	PTPDC1	NP_001193525.1
Danio rerio (zebrafish)	ptpdc1	NP_001074065.2
Homo sapiens (human)	PTPDC1	NP_001240758.1

Gene Ontology
Bibliography

Related articles in PubMed

High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)

Non-synonymous FGD3 Variant as Positional Candidate for Disproportional Tall Stature Accounting for a Carcass Weight QTL (CW-3) and Skeletal Dysplasia in Japanese Black Cattle.
Takasuga A, Sato K, Nakamura R, Saito Y, Sasaki S, Tsuji T, Suzuki A, Kobayashi H, Matsuhashi T, Setoguchi K, Okabe H, Ootsubo T, Tabuchi I, Fujita T, Watanabe N, Hirano T, Nishimura S, Watanabe T, Hayakawa M, Sugimoto Y, Kojima T
PLoS genetics11(8)e1005433(2015 Aug)

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H
Nucleic acids research42(Database issue)D802-9(2014 Jan)

Functional characterization of putative cilia genes by high-content analysis.
Lai CK, Gupta N, Wen X, Rangell L, Chih B, Peterson AS, Bazan JF, Li L, Scales SJ
Molecular biology of the cell22(7)1104-19(2011 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

These results suggested that Ptpcd1 is involved in centrosomal duplication and cytokinesis.
Title: Ptpcd-1 is a novel cell cycle related phosphatase that regulates centriole duplication and cytokinesis.

AW456874 is most abundantly expressed in tissues rich in highly ciliated cells, such as olfactory sensory neurons, and is predicted to be important to cilia.
Title: Tissue expression patterns identify mouse cilia genes.

The following Ptpdc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ptpdc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMu73050	NM_001301781.1 Latest version!	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
OMu48545	XM_006516922.2 Latest version!	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
OMu09864	NM_207232.2 Latest version!	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$440.30 $629.00
OMu48545	NM_001374755.1 Latest version!	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ptpdc1 ( NM_001301781.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001288710.1 Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 1, mRNA.

Price & Availability↑

CloneID	OMu73050
Clone ID Related Accession (Same CDS sequence)	NM_001301781.1
Accession Version	NM_001301781.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2427bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2020-01-01
Organism	Mus musculus(house mouse)
Product	protein tyrosine phosphatase domain-containing protein 1 isoform 1
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from CJ169499.1, AK132781.1, AK030415.1 and AI843923.1. On Sep 13, 2014 this sequence version replaced XM_006516921.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK132781.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCCGCAG GAGTCTTGCC ACAGAATGAA GATCCATATT CCACGTTGGT GAATAGCAGT 
GGGCATGCTG CACACATGGA TGGTGAGGAG AAAATGCTTA TCTTGAGACA TCTTACGGAC 
CCAGTCTGGA TGTGGAGCCG TGTGTTTTGC CGCCTAGAGC TCGCTGAGCC CCTCAGAGAG 
TCCATCCTGC TCGTCACTGC ATCTGCGATG CTGAAGCTGC GGTTTCTCAC TCGGCTGTCT 
TCTGGGCTCT CCTGCTGCAT TCTTGAAAAT TCAGGACGCC CAGCACCAAA ATACACGAAA 
GTGGGAGAAC GTTTGCGGCA TGTCATCCCT GGGCACATGG CATGTTCCAT GGCGTGTGGT 
GGGAGAGCGT GTAAGTATGA GAACCCAGCC CGCTGGAGTG AGCAGGAGCA AGCCATTAAG 
GGAGTATACT CATCCTGGGT CACTGACAAT ATCCTGGCCA TGGCTCGTCC GTCCTCCGAG 
CTGCTGGAGA AGTATCGCAT CATCGAGCAG TTCCTCGGTC AAGGCATAAA AACAATAATC 
AACCTGCAGC GCCCTGGAGA GCATGCCAGC TGTGGGAGCG CTCTGGAACA AGAAAGTGGT 
TTCACCTACC TTCCTGAGGC ATTCATGGAG GCTGGCATTT ATTTCTACAA CTTTGGGTGG 
AAGGATTATG GCGTGGCTTC CCTCACTGCC ATCTTGGACA TGGTAAAGGT GATGACATTT 
GCCTTACAGG AAGGGAAAGT GGCTGTCCAC TGCCACGCGG GGCTCGGCCG CACAGGTGTG 
CTAATAGCAT GTTATTTAGT TTTTGCAACA AGAATGACTG CTGACCAAGC AATTATATTT 
GTTCGGGCAA AACGCCCCAA TTCCATACAA ACAAGAGGAC AACTGCTCTG TGTACGGGAA 
TTCACGCAGT TCCTGGCTCC ACTCCGTAAT ATTTTCTCTT GCTGTGACCC CAAAGCACAT 
GCTGTTACCT TAGCCCAGTA CCTGATTCGC CAGCGACATC TGCTTCATGG CTACGAGGCA 
CGACTTCTGA AGTACGTGCC GAAGATCATC CACCTGGTTT GCAAACTGCT GCTTGACTTG 
GCTGAGAACC GGCCAGTGGT GATGAAGAGC ATGCTAGAAG GACCTGTGCT CTCTGCTGAA 
ATCGAAAAGA CCGTGTCTGA GATGGTCACG CTGCAGCTAG ATCAAGAGTT ACTCAGGCAA 
AACAGTGATG TGCCCGACCC GTTTAACCCC ACTGCAGAGG TGGCCGAGTT CGAGAATCAG 
GATGTGATTC TCTCTACTGA GCAGGAGTTT GACCCCCTCT GGAAGAGGAG GGATATTGAG 
TGCCTTCAGC CCCTGACACA TCTGAAAAGA CAGCTCAGCT ACAGCGACTC AGACTTAAAG 
AGGGCCAAAG CCATCCTGGA ACAAGGGGAG ACACCTTGGA CAGTGCCTGC CCAGGAGTTG 
CTAGACCACA GTCTCCAGCA TCAGAAGCCC ACGAGCCATT GCTACATGCC ACCAACTCCA 
GAGCTGGGTT TTAATAAGGA GGCACTGGTC CAAAATACCT TTTCTTTCTG GACTCCGTCA 
AAGTGTGGAG GCTTAGAAGG ACTGAAGGAT GAGGGATCGC TGCTTTTGTG CAGGAAGGAC 
ATTCCAAAGG AAGTACAGCG GAGCAGAACC TTCTCTGTGG GTGTTTCTTG TTCACACAAT 
CCTGGAGAGC CAGTGCCGCC CAACTTCACA AGTATCCATA AGGATCCAGA GCAGGTCACC 
CATTGCCGGT GTGAGGCTCC TGGTGGCTGG GTCCCGGGCC CTGTTCACGA GATGGTCAGG 
AGCCCCTGTA GCCCTCTGAA CTGTGGCTCC AGTCCTAAGG CGCAGTTCCC ACACGGACAG 
GAAACCCAAG ACAGCACAGA CCTGTCTGAG GCAGTGCCGC ATGCTGGTCT GCAGCCTGAA 
CTGAGTGCTG AAGCAAGGAG AATACTGGCG GCCAAAGCCC TGGCAAACTT AAATGAGTTT 
GTTGAAAAGG AGGAAGTGAA AAGGAAAGTG GAGATGTGGC AGAAAGAACT AAATTCCCGG 
GAGGAAGCCT GGGAACGAAT ATGCGGCGAG AGAGACCCTT TCATCTTGTG CAGTTTGATG 
TGGTCTTGGG TTGAGCAACT GAAAGAGCCT GTAATCACCA AAGAGGATGT GGACATGCTG 
GTCGACAGAC AAGCAGATGC TGCCGAAGCC CTGTTTTTAC TAGAGAAGGG GCAGTACCAG 
ACCATCCTCT GTGTGCTGCA CTGCATAGTG AGCCTGCAGA CGCTTCCCAT GGAGGTGGAG 
GAAGCTTGCC TTTTACATGC CATTAAAGCT TTCACCAAGG TTAATTTTGA TTCTGAAAAC 
GGACCAATAG TTTACGACAC CTTGAAAAAA ATATTTAAGC ACACGTTGGA AGAAAAGAGG 
AAAATGGCAA AAGACAGCCT CTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001288710.1
CDS	303..2729
Translation	MAAGVLPQNEDPYSTLVNSSGHAAHMDGEEKMLILRHLTDPVWMWSRVFCRLELAEPLRESILLVTASAMLKLRFLTRLSSGLSCCILENSGRPAPKYTKVGERLRHVIPGHMACSMACGGRACKYENPARWSEQEQAIKGVYSSWVTDNILAMARPSSELLEKYRIIEQFLGQGIKTIINLQRPGEHASCGSALEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTAILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLAPLRNIFSCCDPKAHAVTLAQYLIRQRHLLHGYEARLLKYVPKIIHLVCKLLLDLAENRPVVMKSMLEGPVLSAEIEKTVSEMVTLQLDQELLRQNSDVPDPFNPTAEVAEFENQDVILSTEQEFDPLWKRRDIECLQPLTHLKRQLSYSDSDLKRAKAILEQGETPWTVPAQELLDHSLQHQKPTSHCYMPPTPELGFNKEALVQNTFSFWTPSKCGGLEGLKDEGSLLLCRKDIPKEVQRSRTFSVGVSCSHNPGEPVPPNFTSIHKDPEQVTHCRCEAPGGWVPGPVHEMVRSPCSPLNCGSSPKAQFPHGQETQDSTDLSEAVPHAGLQPELSAEARRILAAKALANLNEFVEKEEVKRKVEMWQKELNSREEAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRQADAAEALFLLEKGQYQTILCVLHCIVSLQTLPMEVEEACLLHAIKAFTKVNFDSENGPIVYDTLKKIFKHTLEEKRKMAKDSLS

Target ORF information:

RefSeq Version	NM_001301781.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001301781.1

ORF Insert Sequence:

ATGGCCGCAG GAGTCTTGCC ACAGAATGAA GATCCATATT CCACGTTGGT GAATAGCAGT 
GGGCATGCTG CACACATGGA TGGTGAGGAG AAAATGCTTA TCTTGAGACA TCTTACGGAC 
CCAGTCTGGA TGTGGAGCCG TGTGTTTTGC CGCCTAGAGC TCGCTGAGCC CCTCAGAGAG 
TCCATCCTGC TCGTCACTGC ATCTGCGATG CTGAAGCTGC GGTTTCTCAC TCGGCTGTCT 
TCTGGGCTCT CCTGCTGCAT TCTTGAAAAT TCAGGACGCC CAGCACCAAA ATACACGAAA 
GTGGGAGAAC GTTTGCGGCA TGTCATCCCT GGGCACATGG CATGTTCCAT GGCGTGTGGT 
GGGAGAGCGT GTAAGTATGA GAACCCAGCC CGCTGGAGTG AGCAGGAGCA AGCCATTAAG 
GGAGTATACT CATCCTGGGT CACTGACAAT ATCCTGGCCA TGGCTCGTCC GTCCTCCGAG 
CTGCTGGAGA AGTATCGCAT CATCGAGCAG TTCCTCGGTC AAGGCATAAA AACAATAATC 
AACCTGCAGC GCCCTGGAGA GCATGCCAGC TGTGGGAGCG CTCTGGAACA AGAAAGTGGT 
TTCACCTACC TTCCTGAGGC ATTCATGGAG GCTGGCATTT ATTTCTACAA CTTTGGGTGG 
AAGGATTATG GCGTGGCTTC CCTCACTGCC ATCTTGGACA TGGTAAAGGT GATGACATTT 
GCCTTACAGG AAGGGAAAGT GGCTGTCCAC TGCCACGCGG GGCTCGGCCG CACAGGTGTG 
CTAATAGCAT GTTATTTAGT TTTTGCAACA AGAATGACTG CTGACCAAGC AATTATATTT 
GTTCGGGCAA AACGCCCCAA TTCCATACAA ACAAGAGGAC AACTGCTCTG TGTACGGGAA 
TTCACGCAGT TCCTGGCTCC ACTCCGTAAT ATTTTCTCTT GCTGTGACCC CAAAGCACAT 
GCTGTTACCT TAGCCCAGTA CCTGATTCGC CAGCGACATC TGCTTCATGG CTACGAGGCA 
CGACTTCTGA AGTACGTGCC GAAGATCATC CACCTGGTTT GCAAACTGCT GCTTGACTTG 
GCTGAGAACC GGCCAGTGGT GATGAAGAGC ATGCTAGAAG GACCTGTGCT CTCTGCTGAA 
ATCGAAAAGA CCGTGTCTGA GATGGTCACG CTGCAGCTAG ATCAAGAGTT ACTCAGGCAA 
AACAGTGATG TGCCCGACCC GTTTAACCCC ACTGCAGAGG TGGCCGAGTT CGAGAATCAG 
GATGTGATTC TCTCTACTGA GCAGGAGTTT GACCCCCTCT GGAAGAGGAG GGATATTGAG 
TGCCTTCAGC CCCTGACACA TCTGAAAAGA CAGCTCAGCT ACAGCGACTC AGACTTAAAG 
AGGGCCAAAG CCATCCTGGA ACAAGGGGAG ACACCTTGGA CAGTGCCTGC CCAGGAGTTG 
CTAGACCACA GTCTCCAGCA TCAGAAGCCC ACGAGCCATT GCTACATGCC ACCAACTCCA 
GAGCTGGGTT TTAATAAGGA GGCACTGGTC CAAAATACCT TTTCTTTCTG GACTCCGTCA 
AAGTGTGGAG GCTTAGAAGG ACTGAAGGAT GAGGGATCGC TGCTTTTGTG CAGGAAGGAC 
ATTCCAAAGG AAGTACAGCG GAGCAGAACC TTCTCTGTGG GTGTTTCTTG TTCACACAAT 
CCTGGAGAGC CAGTGCCGCC CAACTTCACA AGTATCCATA AGGATCCAGA GCAGGTCACC 
CATTGCCGGT GTGAGGCTCC TGGTGGCTGG GTCCCGGGCC CTGTTCACGA GATGGTCAGG 
AGCCCCTGTA GCCCTCTGAA CTGTGGCTCC AGTCCTAAGG CGCAGTTCCC ACACGGACAG 
GAAACCCAAG ACAGCACAGA CCTGTCTGAG GCAGTGCCGC ATGCTGGTCT GCAGCCTGAA 
CTGAGTGCTG AAGCAAGGAG AATACTGGCG GCCAAAGCCC TGGCAAACTT AAATGAGTTT 
GTTGAAAAGG AGGAAGTGAA AAGGAAAGTG GAGATGTGGC AGAAAGAACT AAATTCCCGG 
GAGGAAGCCT GGGAACGAAT ATGCGGCGAG AGAGACCCTT TCATCTTGTG CAGTTTGATG 
TGGTCTTGGG TTGAGCAACT GAAAGAGCCT GTAATCACCA AAGAGGATGT GGACATGCTG 
GTCGACAGAC AAGCAGATGC TGCCGAAGCC CTGTTTTTAC TAGAGAAGGG GCAGTACCAG 
ACCATCCTCT GTGTGCTGCA CTGCATAGTG AGCCTGCAGA CGCTTCCCAT GGAGGTGGAG 
GAAGCTTGCC TTTTACATGC CATTAAAGCT TTCACCAAGG TTAATTTTGA TTCTGAAAAC 
GGACCAATAG TTTACGACAC CTTGAAAAAA ATATTTAAGC ACACGTTGGA AGAAAAGAGG 
AAAATGGCAA AAGACAGCCT CTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ptpdc1 ( XM_006516922.2 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006516985.1 Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMu48545
Clone ID Related Accession (Same CDS sequence)	XM_006516922.2 , NM_001374755.1
Accession Version	XM_006516922.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2388bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Mus musculus(house mouse)
Product	protein tyrosine phosphatase domain-containing protein 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000079.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006516922.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAGATGC AGGACCCATC CCGGAGGCCC TCGGCCGTGC ACTTCCTCAG TGCCTTTCTG 
CAGGGCCGCC GGCACTCCAC TTCTGACCCA GTCCTGAGGC TACAGCAAGC CCGGCGTGGC 
TCTGGCTCTG CCACCAAACT GCTGTCCTCA TCTTCTCTCC AGGTGATGGT GGCTGTGTCT 
TCTGTCAGCC GGACAGAGGG GACTCCAACT TTCCCGGAGA GAAAAAAAAA TTCAGGACGC 
CCAGCACCAA AATACACGAA AGTGGGAGAA CGTTTGCGGC ATGTCATCCC TGGGCACATG 
GCATGTTCCA TGGCGTGTGG TGGGAGAGCG TGTAAGTATG AGAACCCAGC CCGCTGGAGT 
GAGCAGGAGC AAGCCATTAA GGGAGTATAC TCATCCTGGG TCACTGACAA TATCCTGGCC 
ATGGCTCGTC CGTCCTCCGA GCTGCTGGAG AAGTATCGCA TCATCGAGCA GTTCCTCGGT 
CAAGGCATAA AAACAATAAT CAACCTGCAG CGCCCTGGAG AGCATGCCAG CTGTGGGAGC 
GCTCTGGAAC AAGAAAGTGG TTTCACCTAC CTTCCTGAGG CATTCATGGA GGCTGGCATT 
TATTTCTACA ACTTTGGGTG GAAGGATTAT GGCGTGGCTT CCCTCACTGC CATCTTGGAC 
ATGGTAAAGG TGATGACATT TGCCTTACAG GAAGGGAAAG TGGCTGTCCA CTGCCACGCG 
GGGCTCGGCC GCACAGGTGT GCTAATAGCA TGTTATTTAG TTTTTGCAAC AAGAATGACT 
GCTGACCAAG CAATTATATT TGTTCGGGCA AAACGCCCCA ATTCCATACA AACAAGAGGA 
CAACTGCTCT GTGTACGGGA ATTCACGCAG TTCCTGGCTC CACTCCGTAA TATTTTCTCT 
TGCTGTGACC CCAAAGCACA TGCTGTTACC TTAGCCCAGT ACCTGATTCG CCAGCGACAT 
CTGCTTCATG GCTACGAGGC ACGACTTCTG AAGTACGTGC CGAAGATCAT CCACCTGGTT 
TGCAAACTGC TGCTTGACTT GGCTGAGAAC CGGCCAGTGG TGATGAAGAG CATGCTAGAA 
GGACCTGTGC TCTCTGCTGA AATCGAAAAG ACCGTGTCTG AGATGGTCAC GCTGCAGCTA 
GATCAAGAGT TACTCAGGCA AAACAGTGAT GTGCCCGACC CGTTTAACCC CACTGCAGAG 
GTGGCCGAGT TCGAGAATCA GGATGTGATT CTCTCTACTG AGCAGGAGTT TGACCCCCTC 
TGGAAGAGGA GGGATATTGA GTGCCTTCAG CCCCTGACAC ATCTGAAAAG ACAGCTCAGC 
TACAGCGACT CAGACTTAAA GAGGGCCAAA GCCATCCTGG AACAAGGGGA GACACCTTGG 
ACAGTGCCTG CCCAGGAGTT GCTAGACCAC AGTCTCCAGC ATCAGAAGCC CACGAGCCAT 
TGCTACATGC CACCAACTCC AGAGCTGGGT TTTAATAAGG AGGCACTGGT CCAAAATACC 
TTTTCTTTCT GGACTCCGTC AAAGTGTGGA GGCTTAGAAG GACTGAAGGA TGAGGGATCG 
CTGCTTTTGT GCAGGAAGGA CATTCCAAAG GAAGTACAGC GGAGCAGAAC CTTCTCTGTG 
GGTGTTTCTT GTTCACACAA TCCTGGAGAG CCAGTGCCGC CCAACTTCAC AAGTATCCAT 
AAGGATCCAG AGCAGGTCAC CCATTGCCGG TGTGAGGCTC CTGGTGGCTG GGTCCCGGGC 
CCTGTTCACG AGATGGTCAG GAGCCCCTGT AGCCCTCTGA ACTGTGGCTC CAGTCCTAAG 
GCGCAGTTCC CACACGGACA GGAAACCCAA GACAGCACAG ACCTGTCTGA GGCAGTGCCG 
CATGCTGGTC TGCAGCCTGA ACTGAGTGCT GAAGCAAGGA GAATACTGGC GGCCAAAGCC 
CTGGCAAACT TAAATGAGTT TGTTGAAAAG GAGGAAGTGA AAAGGAAAGT GGAGATGTGG 
CAGAAAGAAC TAAATTCCCG GGAGGAAGCC TGGGAACGAA TATGCGGCGA GAGAGACCCT 
TTCATCTTGT GCAGTTTGAT GTGGTCTTGG GTTGAGCAAC TGAAAGAGCC TGTAATCACC 
AAAGAGGATG TGGACATGCT GGTCGACAGA CAAGCAGATG CTGCCGAAGC CCTGTTTTTA 
CTAGAGAAGG GGCAGTACCA GACCATCCTC TGTGTGCTGC ACTGCATAGT GAGCCTGCAG 
ACGCTTCCCA TGGAGGTGGA GGAAGCTTGC CTTTTACATG CCATTAAAGC TTTCACCAAG 
GTTAATTTTG ATTCTGAAAA CGGACCAATA GTTTACGACA CCTTGAAAAA AATATTTAAG 
CACACGTTGG AAGAAAAGAG GAAAATGGCA AAAGACAGCC TCTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006516985.1
CDS	90..2477
Translation	MQMQDPSRRPSAVHFLSAFLQGRRHSTSDPVLRLQQARRGSGSATKLLSSSSLQVMVAVSSVSRTEGTPTFPERKKNSGRPAPKYTKVGERLRHVIPGHMACSMACGGRACKYENPARWSEQEQAIKGVYSSWVTDNILAMARPSSELLEKYRIIEQFLGQGIKTIINLQRPGEHASCGSALEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTAILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLAPLRNIFSCCDPKAHAVTLAQYLIRQRHLLHGYEARLLKYVPKIIHLVCKLLLDLAENRPVVMKSMLEGPVLSAEIEKTVSEMVTLQLDQELLRQNSDVPDPFNPTAEVAEFENQDVILSTEQEFDPLWKRRDIECLQPLTHLKRQLSYSDSDLKRAKAILEQGETPWTVPAQELLDHSLQHQKPTSHCYMPPTPELGFNKEALVQNTFSFWTPSKCGGLEGLKDEGSLLLCRKDIPKEVQRSRTFSVGVSCSHNPGEPVPPNFTSIHKDPEQVTHCRCEAPGGWVPGPVHEMVRSPCSPLNCGSSPKAQFPHGQETQDSTDLSEAVPHAGLQPELSAEARRILAAKALANLNEFVEKEEVKRKVEMWQKELNSREEAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRQADAAEALFLLEKGQYQTILCVLHCIVSLQTLPMEVEEACLLHAIKAFTKVNFDSENGPIVYDTLKKIFKHTLEEKRKMAKDSLS

Target ORF information:

RefSeq Version	XM_006516922.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006516922.2

ORF Insert Sequence:

ATGCAGATGC AGGACCCATC CCGGAGGCCC TCGGCCGTGC ACTTCCTCAG TGCCTTTCTG 
CAGGGCCGCC GGCACTCCAC TTCTGACCCA GTCCTGAGGC TACAGCAAGC CCGGCGTGGC 
TCTGGCTCTG CCACCAAACT GCTGTCCTCA TCTTCTCTCC AGGTGATGGT GGCTGTGTCT 
TCTGTCAGCC GGACAGAGGG GACTCCAACT TTCCCGGAGA GAAAAAAAAA TTCAGGACGC 
CCAGCACCAA AATACACGAA AGTGGGAGAA CGTTTGCGGC ATGTCATCCC TGGGCACATG 
GCATGTTCCA TGGCGTGTGG TGGGAGAGCG TGTAAGTATG AGAACCCAGC CCGCTGGAGT 
GAGCAGGAGC AAGCCATTAA GGGAGTATAC TCATCCTGGG TCACTGACAA TATCCTGGCC 
ATGGCTCGTC CGTCCTCCGA GCTGCTGGAG AAGTATCGCA TCATCGAGCA GTTCCTCGGT 
CAAGGCATAA AAACAATAAT CAACCTGCAG CGCCCTGGAG AGCATGCCAG CTGTGGGAGC 
GCTCTGGAAC AAGAAAGTGG TTTCACCTAC CTTCCTGAGG CATTCATGGA GGCTGGCATT 
TATTTCTACA ACTTTGGGTG GAAGGATTAT GGCGTGGCTT CCCTCACTGC CATCTTGGAC 
ATGGTAAAGG TGATGACATT TGCCTTACAG GAAGGGAAAG TGGCTGTCCA CTGCCACGCG 
GGGCTCGGCC GCACAGGTGT GCTAATAGCA TGTTATTTAG TTTTTGCAAC AAGAATGACT 
GCTGACCAAG CAATTATATT TGTTCGGGCA AAACGCCCCA ATTCCATACA AACAAGAGGA 
CAACTGCTCT GTGTACGGGA ATTCACGCAG TTCCTGGCTC CACTCCGTAA TATTTTCTCT 
TGCTGTGACC CCAAAGCACA TGCTGTTACC TTAGCCCAGT ACCTGATTCG CCAGCGACAT 
CTGCTTCATG GCTACGAGGC ACGACTTCTG AAGTACGTGC CGAAGATCAT CCACCTGGTT 
TGCAAACTGC TGCTTGACTT GGCTGAGAAC CGGCCAGTGG TGATGAAGAG CATGCTAGAA 
GGACCTGTGC TCTCTGCTGA AATCGAAAAG ACCGTGTCTG AGATGGTCAC GCTGCAGCTA 
GATCAAGAGT TACTCAGGCA AAACAGTGAT GTGCCCGACC CGTTTAACCC CACTGCAGAG 
GTGGCCGAGT TCGAGAATCA GGATGTGATT CTCTCTACTG AGCAGGAGTT TGACCCCCTC 
TGGAAGAGGA GGGATATTGA GTGCCTTCAG CCCCTGACAC ATCTGAAAAG ACAGCTCAGC 
TACAGCGACT CAGACTTAAA GAGGGCCAAA GCCATCCTGG AACAAGGGGA GACACCTTGG 
ACAGTGCCTG CCCAGGAGTT GCTAGACCAC AGTCTCCAGC ATCAGAAGCC CACGAGCCAT 
TGCTACATGC CACCAACTCC AGAGCTGGGT TTTAATAAGG AGGCACTGGT CCAAAATACC 
TTTTCTTTCT GGACTCCGTC AAAGTGTGGA GGCTTAGAAG GACTGAAGGA TGAGGGATCG 
CTGCTTTTGT GCAGGAAGGA CATTCCAAAG GAAGTACAGC GGAGCAGAAC CTTCTCTGTG 
GGTGTTTCTT GTTCACACAA TCCTGGAGAG CCAGTGCCGC CCAACTTCAC AAGTATCCAT 
AAGGATCCAG AGCAGGTCAC CCATTGCCGG TGTGAGGCTC CTGGTGGCTG GGTCCCGGGC 
CCTGTTCACG AGATGGTCAG GAGCCCCTGT AGCCCTCTGA ACTGTGGCTC CAGTCCTAAG 
GCGCAGTTCC CACACGGACA GGAAACCCAA GACAGCACAG ACCTGTCTGA GGCAGTGCCG 
CATGCTGGTC TGCAGCCTGA ACTGAGTGCT GAAGCAAGGA GAATACTGGC GGCCAAAGCC 
CTGGCAAACT TAAATGAGTT TGTTGAAAAG GAGGAAGTGA AAAGGAAAGT GGAGATGTGG 
CAGAAAGAAC TAAATTCCCG GGAGGAAGCC TGGGAACGAA TATGCGGCGA GAGAGACCCT 
TTCATCTTGT GCAGTTTGAT GTGGTCTTGG GTTGAGCAAC TGAAAGAGCC TGTAATCACC 
AAAGAGGATG TGGACATGCT GGTCGACAGA CAAGCAGATG CTGCCGAAGC CCTGTTTTTA 
CTAGAGAAGG GGCAGTACCA GACCATCCTC TGTGTGCTGC ACTGCATAGT GAGCCTGCAG 
ACGCTTCCCA TGGAGGTGGA GGAAGCTTGC CTTTTACATG CCATTAAAGC TTTCACCAAG 
GTTAATTTTG ATTCTGAAAA CGGACCAATA GTTTACGACA CCTTGAAAAA AATATTTAAG 
CACACGTTGG AAGAAAAGAG GAAAATGGCA AAAGACAGCC TCTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ptpdc1 ( NM_207232.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_997115.1 Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 2, mRNA.

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CloneID	OMu09864
Clone ID Related Accession (Same CDS sequence)	NM_207232.2
Accession Version	NM_207232.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2244bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2020-01-01
Organism	Mus musculus(house mouse)
Product	protein tyrosine phosphatase domain-containing protein 1 isoform 2
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from CJ169499.1, AK030415.1 and AI843923.1. On Sep 13, 2014 this sequence version replaced NM_207232.1. Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The encoded isoform (2) is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK030415.1, BC066081.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCCGCAG GAGTCTTGCC ACAGAATGAA GATCCATATT CCACGTTGGT GAATAGCAGT 
GGGCATGCTG CACACATGGA TGAAAATTCA GGACGCCCAG CACCAAAATA CACGAAAGTG 
GGAGAACGTT TGCGGCATGT CATCCCTGGG CACATGGCAT GTTCCATGGC GTGTGGTGGG 
AGAGCGTGTA AGTATGAGAA CCCAGCCCGC TGGAGTGAGC AGGAGCAAGC CATTAAGGGA 
GTATACTCAT CCTGGGTCAC TGACAATATC CTGGCCATGG CTCGTCCGTC CTCCGAGCTG 
CTGGAGAAGT ATCGCATCAT CGAGCAGTTC CTCGGTCAAG GCATAAAAAC AATAATCAAC 
CTGCAGCGCC CTGGAGAGCA TGCCAGCTGT GGGAGCGCTC TGGAACAAGA AAGTGGTTTC 
ACCTACCTTC CTGAGGCATT CATGGAGGCT GGCATTTATT TCTACAACTT TGGGTGGAAG 
GATTATGGCG TGGCTTCCCT CACTGCCATC TTGGACATGG TAAAGGTGAT GACATTTGCC 
TTACAGGAAG GGAAAGTGGC TGTCCACTGC CACGCGGGGC TCGGCCGCAC AGGTGTGCTA 
ATAGCATGTT ATTTAGTTTT TGCAACAAGA ATGACTGCTG ACCAAGCAAT TATATTTGTT 
CGGGCAAAAC GCCCCAATTC CATACAAACA AGAGGACAAC TGCTCTGTGT ACGGGAATTC 
ACGCAGTTCC TGGCTCCACT CCGTAATATT TTCTCTTGCT GTGACCCCAA AGCACATGCT 
GTTACCTTAG CCCAGTACCT GATTCGCCAG CGACATCTGC TTCATGGCTA CGAGGCACGA 
CTTCTGAAGT ACGTGCCGAA GATCATCCAC CTGGTTTGCA AACTGCTGCT TGACTTGGCT 
GAGAACCGGC CAGTGGTGAT GAAGAGCATG CTAGAAGGAC CTGTGCTCTC TGCTGAAATC 
GAAAAGACCG TGTCTGAGAT GGTCACGCTG CAGCTAGATC AAGAGTTACT CAGGCAAAAC 
AGTGATGTGC CCGACCCGTT TAACCCCACT GCAGAGGTGG CCGAGTTCGA GAATCAGGAT 
GTGATTCTCT CTACTGAGCA GGAGTTTGAC CCCCTCTGGA AGAGGAGGGA TATTGAGTGC 
CTTCAGCCCC TGACACATCT GAAAAGACAG CTCAGCTACA GCGACTCAGA CTTAAAGAGG 
GCCAAAGCCA TCCTGGAACA AGGGGAGACA CCTTGGACAG TGCCTGCCCA GGAGTTGCTA 
GACCACAGTC TCCAGCATCA GAAGCCCACG AGCCATTGCT ACATGCCACC AACTCCAGAG 
CTGGGTTTTA ATAAGGAGGC ACTGGTCCAA AATACCTTTT CTTTCTGGAC TCCGTCAAAG 
TGTGGAGGCT TAGAAGGACT GAAGGATGAG GGATCGCTGC TTTTGTGCAG GAAGGACATT 
CCAAAGGAAG TACAGCGGAG CAGAACCTTC TCTGTGGGTG TTTCTTGTTC ACACAATCCT 
GGAGAGCCAG TGCCGCCCAA CTTCACAAGT ATCCATAAGG ATCCAGAGCA GGTCACCCAT 
TGCCGGTGTG AGGCTCCTGG TGGCTGGGTC CCGGGCCCTG TTCACGAGAT GGTCAGGAGC 
CCCTGTAGCC CTCTGAACTG TGGCTCCAGT CCTAAGGCGC AGTTCCCACA CGGACAGGAA 
ACCCAAGACA GCACAGACCT GTCTGAGGCA GTGCCGCATG CTGGTCTGCA GCCTGAACTG 
AGTGCTGAAG CAAGGAGAAT ACTGGCGGCC AAAGCCCTGG CAAACTTAAA TGAGTTTGTT 
GAAAAGGAGG AAGTGAAAAG GAAAGTGGAG ATGTGGCAGA AAGAACTAAA TTCCCGGGAG 
GAAGCCTGGG AACGAATATG CGGCGAGAGA GACCCTTTCA TCTTGTGCAG TTTGATGTGG 
TCTTGGGTTG AGCAACTGAA AGAGCCTGTA ATCACCAAAG AGGATGTGGA CATGCTGGTC 
GACAGACAAG CAGATGCTGC CGAAGCCCTG TTTTTACTAG AGAAGGGGCA GTACCAGACC 
ATCCTCTGTG TGCTGCACTG CATAGTGAGC CTGCAGACGC TTCCCATGGA GGTGGAGGAA 
GCTTGCCTTT TACATGCCAT TAAAGCTTTC ACCAAGGTTA ATTTTGATTC TGAAAACGGA 
CCAATAGTTT ACGACACCTT GAAAAAAATA TTTAAGCACA CGTTGGAAGA AAAGAGGAAA 
ATGGCAAAAG ACAGCCTCTC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_997115.1
CDS	303..2546
Translation	MAAGVLPQNEDPYSTLVNSSGHAAHMDENSGRPAPKYTKVGERLRHVIPGHMACSMACGGRACKYENPARWSEQEQAIKGVYSSWVTDNILAMARPSSELLEKYRIIEQFLGQGIKTIINLQRPGEHASCGSALEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTAILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLAPLRNIFSCCDPKAHAVTLAQYLIRQRHLLHGYEARLLKYVPKIIHLVCKLLLDLAENRPVVMKSMLEGPVLSAEIEKTVSEMVTLQLDQELLRQNSDVPDPFNPTAEVAEFENQDVILSTEQEFDPLWKRRDIECLQPLTHLKRQLSYSDSDLKRAKAILEQGETPWTVPAQELLDHSLQHQKPTSHCYMPPTPELGFNKEALVQNTFSFWTPSKCGGLEGLKDEGSLLLCRKDIPKEVQRSRTFSVGVSCSHNPGEPVPPNFTSIHKDPEQVTHCRCEAPGGWVPGPVHEMVRSPCSPLNCGSSPKAQFPHGQETQDSTDLSEAVPHAGLQPELSAEARRILAAKALANLNEFVEKEEVKRKVEMWQKELNSREEAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRQADAAEALFLLEKGQYQTILCVLHCIVSLQTLPMEVEEACLLHAIKAFTKVNFDSENGPIVYDTLKKIFKHTLEEKRKMAKDSLS

Target ORF information:

RefSeq Version	NM_207232.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_207232.2

ORF Insert Sequence:

ATGGCCGCAG GAGTCTTGCC ACAGAATGAA GATCCATATT CCACGTTGGT GAATAGCAGT 
GGGCATGCTG CACACATGGA TGAAAATTCA GGACGCCCAG CACCAAAATA CACGAAAGTG 
GGAGAACGTT TGCGGCATGT CATCCCTGGG CACATGGCAT GTTCCATGGC GTGTGGTGGG 
AGAGCGTGTA AGTATGAGAA CCCAGCCCGC TGGAGTGAGC AGGAGCAAGC CATTAAGGGA 
GTATACTCAT CCTGGGTCAC TGACAATATC CTGGCCATGG CTCGTCCGTC CTCCGAGCTG 
CTGGAGAAGT ATCGCATCAT CGAGCAGTTC CTCGGTCAAG GCATAAAAAC AATAATCAAC 
CTGCAGCGCC CTGGAGAGCA TGCCAGCTGT GGGAGCGCTC TGGAACAAGA AAGTGGTTTC 
ACCTACCTTC CTGAGGCATT CATGGAGGCT GGCATTTATT TCTACAACTT TGGGTGGAAG 
GATTATGGCG TGGCTTCCCT CACTGCCATC TTGGACATGG TAAAGGTGAT GACATTTGCC 
TTACAGGAAG GGAAAGTGGC TGTCCACTGC CACGCGGGGC TCGGCCGCAC AGGTGTGCTA 
ATAGCATGTT ATTTAGTTTT TGCAACAAGA ATGACTGCTG ACCAAGCAAT TATATTTGTT 
CGGGCAAAAC GCCCCAATTC CATACAAACA AGAGGACAAC TGCTCTGTGT ACGGGAATTC 
ACGCAGTTCC TGGCTCCACT CCGTAATATT TTCTCTTGCT GTGACCCCAA AGCACATGCT 
GTTACCTTAG CCCAGTACCT GATTCGCCAG CGACATCTGC TTCATGGCTA CGAGGCACGA 
CTTCTGAAGT ACGTGCCGAA GATCATCCAC CTGGTTTGCA AACTGCTGCT TGACTTGGCT 
GAGAACCGGC CAGTGGTGAT GAAGAGCATG CTAGAAGGAC CTGTGCTCTC TGCTGAAATC 
GAAAAGACCG TGTCTGAGAT GGTCACGCTG CAGCTAGATC AAGAGTTACT CAGGCAAAAC 
AGTGATGTGC CCGACCCGTT TAACCCCACT GCAGAGGTGG CCGAGTTCGA GAATCAGGAT 
GTGATTCTCT CTACTGAGCA GGAGTTTGAC CCCCTCTGGA AGAGGAGGGA TATTGAGTGC 
CTTCAGCCCC TGACACATCT GAAAAGACAG CTCAGCTACA GCGACTCAGA CTTAAAGAGG 
GCCAAAGCCA TCCTGGAACA AGGGGAGACA CCTTGGACAG TGCCTGCCCA GGAGTTGCTA 
GACCACAGTC TCCAGCATCA GAAGCCCACG AGCCATTGCT ACATGCCACC AACTCCAGAG 
CTGGGTTTTA ATAAGGAGGC ACTGGTCCAA AATACCTTTT CTTTCTGGAC TCCGTCAAAG 
TGTGGAGGCT TAGAAGGACT GAAGGATGAG GGATCGCTGC TTTTGTGCAG GAAGGACATT 
CCAAAGGAAG TACAGCGGAG CAGAACCTTC TCTGTGGGTG TTTCTTGTTC ACACAATCCT 
GGAGAGCCAG TGCCGCCCAA CTTCACAAGT ATCCATAAGG ATCCAGAGCA GGTCACCCAT 
TGCCGGTGTG AGGCTCCTGG TGGCTGGGTC CCGGGCCCTG TTCACGAGAT GGTCAGGAGC 
CCCTGTAGCC CTCTGAACTG TGGCTCCAGT CCTAAGGCGC AGTTCCCACA CGGACAGGAA 
ACCCAAGACA GCACAGACCT GTCTGAGGCA GTGCCGCATG CTGGTCTGCA GCCTGAACTG 
AGTGCTGAAG CAAGGAGAAT ACTGGCGGCC AAAGCCCTGG CAAACTTAAA TGAGTTTGTT 
GAAAAGGAGG AAGTGAAAAG GAAAGTGGAG ATGTGGCAGA AAGAACTAAA TTCCCGGGAG 
GAAGCCTGGG AACGAATATG CGGCGAGAGA GACCCTTTCA TCTTGTGCAG TTTGATGTGG 
TCTTGGGTTG AGCAACTGAA AGAGCCTGTA ATCACCAAAG AGGATGTGGA CATGCTGGTC 
GACAGACAAG CAGATGCTGC CGAAGCCCTG TTTTTACTAG AGAAGGGGCA GTACCAGACC 
ATCCTCTGTG TGCTGCACTG CATAGTGAGC CTGCAGACGC TTCCCATGGA GGTGGAGGAA 
GCTTGCCTTT TACATGCCAT TAAAGCTTTC ACCAAGGTTA ATTTTGATTC TGAAAACGGA 
CCAATAGTTT ACGACACCTT GAAAAAAATA TTTAAGCACA CGTTGGAAGA AAAGAGGAAA 
ATGGCAAAAG ACAGCCTCTC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ptpdc1 ( NM_001374755.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001361684.1 Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 3, mRNA.

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CloneID	OMu48545
Clone ID Related Accession (Same CDS sequence)	XM_006516922.2 , NM_001374755.1
Accession Version	NM_001374755.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2388bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2020-01-04
Organism	Mus musculus(house mouse)
Product	protein tyrosine phosphatase domain-containing protein 1 isoform 3
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC147162.2. On Oct 11, 2019 this sequence version replaced XM_006516922.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: ERR3363657.32972.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END##

ATGCAGATGC AGGACCCATC CCGGAGGCCC TCGGCCGTGC ACTTCCTCAG TGCCTTTCTG 
CAGGGCCGCC GGCACTCCAC TTCTGACCCA GTCCTGAGGC TACAGCAAGC CCGGCGTGGC 
TCTGGCTCTG CCACCAAACT GCTGTCCTCA TCTTCTCTCC AGGTGATGGT GGCTGTGTCT 
TCTGTCAGCC GGACAGAGGG GACTCCAACT TTCCCGGAGA GAAAAAAAAA TTCAGGACGC 
CCAGCACCAA AATACACGAA AGTGGGAGAA CGTTTGCGGC ATGTCATCCC TGGGCACATG 
GCATGTTCCA TGGCGTGTGG TGGGAGAGCG TGTAAGTATG AGAACCCAGC CCGCTGGAGT 
GAGCAGGAGC AAGCCATTAA GGGAGTATAC TCATCCTGGG TCACTGACAA TATCCTGGCC 
ATGGCTCGTC CGTCCTCCGA GCTGCTGGAG AAGTATCGCA TCATCGAGCA GTTCCTCGGT 
CAAGGCATAA AAACAATAAT CAACCTGCAG CGCCCTGGAG AGCATGCCAG CTGTGGGAGC 
GCTCTGGAAC AAGAAAGTGG TTTCACCTAC CTTCCTGAGG CATTCATGGA GGCTGGCATT 
TATTTCTACA ACTTTGGGTG GAAGGATTAT GGCGTGGCTT CCCTCACTGC CATCTTGGAC 
ATGGTAAAGG TGATGACATT TGCCTTACAG GAAGGGAAAG TGGCTGTCCA CTGCCACGCG 
GGGCTCGGCC GCACAGGTGT GCTAATAGCA TGTTATTTAG TTTTTGCAAC AAGAATGACT 
GCTGACCAAG CAATTATATT TGTTCGGGCA AAACGCCCCA ATTCCATACA AACAAGAGGA 
CAACTGCTCT GTGTACGGGA ATTCACGCAG TTCCTGGCTC CACTCCGTAA TATTTTCTCT 
TGCTGTGACC CCAAAGCACA TGCTGTTACC TTAGCCCAGT ACCTGATTCG CCAGCGACAT 
CTGCTTCATG GCTACGAGGC ACGACTTCTG AAGTACGTGC CGAAGATCAT CCACCTGGTT 
TGCAAACTGC TGCTTGACTT GGCTGAGAAC CGGCCAGTGG TGATGAAGAG CATGCTAGAA 
GGACCTGTGC TCTCTGCTGA AATCGAAAAG ACCGTGTCTG AGATGGTCAC GCTGCAGCTA 
GATCAAGAGT TACTCAGGCA AAACAGTGAT GTGCCCGACC CGTTTAACCC CACTGCAGAG 
GTGGCCGAGT TCGAGAATCA GGATGTGATT CTCTCTACTG AGCAGGAGTT TGACCCCCTC 
TGGAAGAGGA GGGATATTGA GTGCCTTCAG CCCCTGACAC ATCTGAAAAG ACAGCTCAGC 
TACAGCGACT CAGACTTAAA GAGGGCCAAA GCCATCCTGG AACAAGGGGA GACACCTTGG 
ACAGTGCCTG CCCAGGAGTT GCTAGACCAC AGTCTCCAGC ATCAGAAGCC CACGAGCCAT 
TGCTACATGC CACCAACTCC AGAGCTGGGT TTTAATAAGG AGGCACTGGT CCAAAATACC 
TTTTCTTTCT GGACTCCGTC AAAGTGTGGA GGCTTAGAAG GACTGAAGGA TGAGGGATCG 
CTGCTTTTGT GCAGGAAGGA CATTCCAAAG GAAGTACAGC GGAGCAGAAC CTTCTCTGTG 
GGTGTTTCTT GTTCACACAA TCCTGGAGAG CCAGTGCCGC CCAACTTCAC AAGTATCCAT 
AAGGATCCAG AGCAGGTCAC CCATTGCCGG TGTGAGGCTC CTGGTGGCTG GGTCCCGGGC 
CCTGTTCACG AGATGGTCAG GAGCCCCTGT AGCCCTCTGA ACTGTGGCTC CAGTCCTAAG 
GCGCAGTTCC CACACGGACA GGAAACCCAA GACAGCACAG ACCTGTCTGA GGCAGTGCCG 
CATGCTGGTC TGCAGCCTGA ACTGAGTGCT GAAGCAAGGA GAATACTGGC GGCCAAAGCC 
CTGGCAAACT TAAATGAGTT TGTTGAAAAG GAGGAAGTGA AAAGGAAAGT GGAGATGTGG 
CAGAAAGAAC TAAATTCCCG GGAGGAAGCC TGGGAACGAA TATGCGGCGA GAGAGACCCT 
TTCATCTTGT GCAGTTTGAT GTGGTCTTGG GTTGAGCAAC TGAAAGAGCC TGTAATCACC 
AAAGAGGATG TGGACATGCT GGTCGACAGA CAAGCAGATG CTGCCGAAGC CCTGTTTTTA 
CTAGAGAAGG GGCAGTACCA GACCATCCTC TGTGTGCTGC ACTGCATAGT GAGCCTGCAG 
ACGCTTCCCA TGGAGGTGGA GGAAGCTTGC CTTTTACATG CCATTAAAGC TTTCACCAAG 
GTTAATTTTG ATTCTGAAAA CGGACCAATA GTTTACGACA CCTTGAAAAA AATATTTAAG 
CACACGTTGG AAGAAAAGAG GAAAATGGCA AAAGACAGCC TCTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001361684.1
CDS	80..2467
Translation	MQMQDPSRRPSAVHFLSAFLQGRRHSTSDPVLRLQQARRGSGSATKLLSSSSLQVMVAVSSVSRTEGTPTFPERKKNSGRPAPKYTKVGERLRHVIPGHMACSMACGGRACKYENPARWSEQEQAIKGVYSSWVTDNILAMARPSSELLEKYRIIEQFLGQGIKTIINLQRPGEHASCGSALEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTAILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLAPLRNIFSCCDPKAHAVTLAQYLIRQRHLLHGYEARLLKYVPKIIHLVCKLLLDLAENRPVVMKSMLEGPVLSAEIEKTVSEMVTLQLDQELLRQNSDVPDPFNPTAEVAEFENQDVILSTEQEFDPLWKRRDIECLQPLTHLKRQLSYSDSDLKRAKAILEQGETPWTVPAQELLDHSLQHQKPTSHCYMPPTPELGFNKEALVQNTFSFWTPSKCGGLEGLKDEGSLLLCRKDIPKEVQRSRTFSVGVSCSHNPGEPVPPNFTSIHKDPEQVTHCRCEAPGGWVPGPVHEMVRSPCSPLNCGSSPKAQFPHGQETQDSTDLSEAVPHAGLQPELSAEARRILAAKALANLNEFVEKEEVKRKVEMWQKELNSREEAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRQADAAEALFLLEKGQYQTILCVLHCIVSLQTLPMEVEEACLLHAIKAFTKVNFDSENGPIVYDTLKKIFKHTLEEKRKMAKDSLS

Target ORF information:

RefSeq Version	NM_001374755.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), transcript variant 3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001374755.1

ORF Insert Sequence:

ATGCAGATGC AGGACCCATC CCGGAGGCCC TCGGCCGTGC ACTTCCTCAG TGCCTTTCTG 
CAGGGCCGCC GGCACTCCAC TTCTGACCCA GTCCTGAGGC TACAGCAAGC CCGGCGTGGC 
TCTGGCTCTG CCACCAAACT GCTGTCCTCA TCTTCTCTCC AGGTGATGGT GGCTGTGTCT 
TCTGTCAGCC GGACAGAGGG GACTCCAACT TTCCCGGAGA GAAAAAAAAA TTCAGGACGC 
CCAGCACCAA AATACACGAA AGTGGGAGAA CGTTTGCGGC ATGTCATCCC TGGGCACATG 
GCATGTTCCA TGGCGTGTGG TGGGAGAGCG TGTAAGTATG AGAACCCAGC CCGCTGGAGT 
GAGCAGGAGC AAGCCATTAA GGGAGTATAC TCATCCTGGG TCACTGACAA TATCCTGGCC 
ATGGCTCGTC CGTCCTCCGA GCTGCTGGAG AAGTATCGCA TCATCGAGCA GTTCCTCGGT 
CAAGGCATAA AAACAATAAT CAACCTGCAG CGCCCTGGAG AGCATGCCAG CTGTGGGAGC 
GCTCTGGAAC AAGAAAGTGG TTTCACCTAC CTTCCTGAGG CATTCATGGA GGCTGGCATT 
TATTTCTACA ACTTTGGGTG GAAGGATTAT GGCGTGGCTT CCCTCACTGC CATCTTGGAC 
ATGGTAAAGG TGATGACATT TGCCTTACAG GAAGGGAAAG TGGCTGTCCA CTGCCACGCG 
GGGCTCGGCC GCACAGGTGT GCTAATAGCA TGTTATTTAG TTTTTGCAAC AAGAATGACT 
GCTGACCAAG CAATTATATT TGTTCGGGCA AAACGCCCCA ATTCCATACA AACAAGAGGA 
CAACTGCTCT GTGTACGGGA ATTCACGCAG TTCCTGGCTC CACTCCGTAA TATTTTCTCT 
TGCTGTGACC CCAAAGCACA TGCTGTTACC TTAGCCCAGT ACCTGATTCG CCAGCGACAT 
CTGCTTCATG GCTACGAGGC ACGACTTCTG AAGTACGTGC CGAAGATCAT CCACCTGGTT 
TGCAAACTGC TGCTTGACTT GGCTGAGAAC CGGCCAGTGG TGATGAAGAG CATGCTAGAA 
GGACCTGTGC TCTCTGCTGA AATCGAAAAG ACCGTGTCTG AGATGGTCAC GCTGCAGCTA 
GATCAAGAGT TACTCAGGCA AAACAGTGAT GTGCCCGACC CGTTTAACCC CACTGCAGAG 
GTGGCCGAGT TCGAGAATCA GGATGTGATT CTCTCTACTG AGCAGGAGTT TGACCCCCTC 
TGGAAGAGGA GGGATATTGA GTGCCTTCAG CCCCTGACAC ATCTGAAAAG ACAGCTCAGC 
TACAGCGACT CAGACTTAAA GAGGGCCAAA GCCATCCTGG AACAAGGGGA GACACCTTGG 
ACAGTGCCTG CCCAGGAGTT GCTAGACCAC AGTCTCCAGC ATCAGAAGCC CACGAGCCAT 
TGCTACATGC CACCAACTCC AGAGCTGGGT TTTAATAAGG AGGCACTGGT CCAAAATACC 
TTTTCTTTCT GGACTCCGTC AAAGTGTGGA GGCTTAGAAG GACTGAAGGA TGAGGGATCG 
CTGCTTTTGT GCAGGAAGGA CATTCCAAAG GAAGTACAGC GGAGCAGAAC CTTCTCTGTG 
GGTGTTTCTT GTTCACACAA TCCTGGAGAG CCAGTGCCGC CCAACTTCAC AAGTATCCAT 
AAGGATCCAG AGCAGGTCAC CCATTGCCGG TGTGAGGCTC CTGGTGGCTG GGTCCCGGGC 
CCTGTTCACG AGATGGTCAG GAGCCCCTGT AGCCCTCTGA ACTGTGGCTC CAGTCCTAAG 
GCGCAGTTCC CACACGGACA GGAAACCCAA GACAGCACAG ACCTGTCTGA GGCAGTGCCG 
CATGCTGGTC TGCAGCCTGA ACTGAGTGCT GAAGCAAGGA GAATACTGGC GGCCAAAGCC 
CTGGCAAACT TAAATGAGTT TGTTGAAAAG GAGGAAGTGA AAAGGAAAGT GGAGATGTGG 
CAGAAAGAAC TAAATTCCCG GGAGGAAGCC TGGGAACGAA TATGCGGCGA GAGAGACCCT 
TTCATCTTGT GCAGTTTGAT GTGGTCTTGG GTTGAGCAAC TGAAAGAGCC TGTAATCACC 
AAAGAGGATG TGGACATGCT GGTCGACAGA CAAGCAGATG CTGCCGAAGC CCTGTTTTTA 
CTAGAGAAGG GGCAGTACCA GACCATCCTC TGTGTGCTGC ACTGCATAGT GAGCCTGCAG 
ACGCTTCCCA TGGAGGTGGA GGAAGCTTGC CTTTTACATG CCATTAAAGC TTTCACCAAG 
GTTAATTTTG ATTCTGAAAA CGGACCAATA GTTTACGACA CCTTGAAAAA AATATTTAAG 
CACACGTTGG AAGAAAAGAG GAAAATGGCA AAAGACAGCC TCTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

High-throughput discovery of novel developmental phenotypes.
Nature537(7621)508-514(2016 09)
Dickinson ME,Flenniken AM,Ji X,Teboul L,Wong MD,White JK,Meehan TF,Weninger WJ,Westerberg H,Adissu H,Baker CN,Bower L,Brown JM,Caddle LB,Chiani F,Clary D,Cleak J,Daly MJ,Denegre JM,Doe B,Dolan ME,Edie SM,Fuchs H,Gailus-Durner V,Galli A,Gambadoro A,Gallegos J,Guo S,Horner NR,Hsu CW,Johnson SJ,Kalaga S,Keith LC,Lanoue L,Lawson TN,Lek M,Mark M,Marschall S,Mason J,McElwee ML,Newbigging S,Nutter LM,Peterson KA,Ramirez-Solis R,Rowland DJ,Ryder E,Samocha KE,Seavitt JR,Selloum M,Szoke-Kovacs Z,Tamura M,Trainor AG,Tudose I,Wakana S,Warren J,Wendling O,West DB,Wong L,Yoshiki A,,,,,,,,,MacArthur DG,Tocchini-Valentini GP,Gao X,Flicek P,Bradley A,Skarnes WC,Justice MJ,Parkinson HE,Moore M,Wells S,Braun RE,Svenson KL,de Angelis MH,Herault Y,Mohun T,Mallon AM,Henkelman RM,Brown SD,Adams DJ,Lloyd KC,McKerlie C,Beaudet AL,Bu?an M,Murray SA

Non-synonymous FGD3 Variant as Positional Candidate for Disproportional Tall Stature Accounting for a Carcass Weight QTL (CW-3) and Skeletal Dysplasia in Japanese Black Cattle.
PLoS genetics11(8)e1005433(2015 Aug)
Takasuga A,Sato K,Nakamura R,Saito Y,Sasaki S,Tsuji T,Suzuki A,Kobayashi H,Matsuhashi T,Setoguchi K,Okabe H,Ootsubo T,Tabuchi I,Fujita T,Watanabe N,Hirano T,Nishimura S,Watanabe T,Hayakawa M,Sugimoto Y,Kojima T

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Nucleic acids research42(Database issue)D802-9(2014 Jan)
Koscielny G,Yaikhom G,Iyer V,Meehan TF,Morgan H,Atienza-Herrero J,Blake A,Chen CK,Easty R,Di Fenza A,Fiegel T,Grifiths M,Horne A,Karp NA,Kurbatova N,Mason JC,Matthews P,Oakley DJ,Qazi A,Regnart J,Retha A,Santos LA,Sneddon DJ,Warren J,Westerberg H,Wilson RJ,Melvin DG,Smedley D,Brown SD,Flicek P,Skarnes WC,Mallon AM,Parkinson H

Functional characterization of putative cilia genes by high-content analysis.
Molecular biology of the cell22(7)1104-19(2011 Apr)
Lai CK,Gupta N,Wen X,Rangell L,Chih B,Peterson AS,Bazan JF,Li L,Scales SJ

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Ptpdc1 cDNA ORF clone, Mus musculus(house mouse)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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