gRNAs
The following Scn1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Scn1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OMu22430 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006499028.2 , XM_006499028.3 , XM_006499028.4 , NM_018733.2 | |
| Accession Version | NM_018733.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5997bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-11-11 | |
| Organism | Mus musculus(house mouse) | |
| Product | sodium channel protein type 1 subunit alpha isoform 2 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL928726.5 and AL844526.5. On or before Feb 24, 2007 this sequence version replaced XM_908529.2, XM_920923.2, XM_920907.2, XM_920899.2, XM_619757.3, XM_899631.2, XM_001001764.1, XM_001001742.1, XM_001001753.1, XM_001001733.1, NM_001080984.1, NM_018733.1. Transcript Variant: This variant (2) uses an alternate internal in-frame splice junction compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849376 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_061203.2 |
| CDS | 188..6184 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_018733.2 |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu22430 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006499028.2 , XM_006499028.3 , XM_006499028.4 , NM_018733.2 | |
| Accession Version | XM_006499028.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5997bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-02-08 | |
| Organism | Mus musculus(House mouse) | |
| Product | sodium channel protein type 1 subunit alpha isoform X1 | |
| Comment | ||
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006499091.1 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006499028.2 |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu22430 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006499028.2 , XM_006499028.3 , XM_006499028.4 , NM_018733.2 | |
| Accession Version | XM_006499028.3 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5997bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-21 | |
| Organism | Mus musculus(house mouse) | |
| Product | sodium channel protein type 1 subunit alpha isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006499028.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006499091.1 |
| CDS | 308..6304 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006499028.3 |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu22430 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006499028.2 , XM_006499028.3 , XM_006499028.4 , NM_018733.2 | |
| Accession Version | XM_006499028.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5997bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-08-07 | |
| Organism | Mus musculus(house mouse) | |
| Product | sodium channel protein type 1 subunit alpha isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006499028.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006499091.1 |
| CDS | 337..6333 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006499028.4 |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu30177 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006499027.4 , XM_006499027.3 , NM_001313997.1 | |
| Accession Version | XM_006499027.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6030bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-08-07 | |
| Organism | Mus musculus(house mouse) | |
| Product | sodium channel protein type 1 subunit alpha isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006499027.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006499090.1 |
| CDS | 337..6366 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006499027.4 |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu30177 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006499027.4 , XM_006499027.3 , NM_001313997.1 | |
| Accession Version | NM_001313997.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6030bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-11-11 | |
| Organism | Mus musculus(house mouse) | |
| Product | sodium channel protein type 1 subunit alpha isoform 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL928726.5 and AL844526.5. On Sep 22, 2015 this sequence version replaced XM_011239389.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849376 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001300926.1 |
| CDS | 188..6217 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001313997.1 |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OMu30177 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006499027.4 , XM_006499027.3 , NM_001313997.1 | |
| Accession Version | XM_006499027.3 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 6030bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-21 | |
| Organism | Mus musculus(house mouse) | |
| Product | sodium channel protein type 1 subunit alpha isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006499027.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006499090.1 |
| CDS | 288..6317 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006499027.3 |
1 | ATGGAGCAAA CAGTGCTTGT ACCACCAGGA CCTGACAGCT TCAACTTCTT CACCAGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
