Pcdha9 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pcdha9
Entrez Gene ID	192161
Full Name	protocadherin alpha 9
General protein information	Preferred Names protocadherin alpha 9 Names protocadherin alpha-9 PCDH-alpha-9
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 18 Map Location: 18\|18 B2-B3

mRNA and Protein(s)

mRNA	Protein	Name
NM_138661.1	NP_619602.1	protocadherin alpha-9 precursor

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	PCDHA10	XP_003310923.1
Rattus norvegicus (Norway rat)	Pcdha10	NP_446391.1
Homo sapiens (human)	PCDHA10	NP_061724.1
	PCDHA10	XP_002804601.1
Canis lupus familiaris (dog)	PCDHA10	XP_848955.2
Mus musculus (house mouse)	Pcdha9	NP_619602.1

Gene Ontology
Bibliography

Related articles in PubMed

The complex genetics of hypoplastic left heart syndrome.
Liu X, Yagi H, Saeed S, Bais AS, Gabriel GC, Chen Z, Peterson KA, Li Y, Schwartz MC, Reynolds WT, Saydmohammed M, Gibbs B, Wu Y, Devine W, Chatterjee B, Klena NT, Kostka D, de Mesy Bentley KL, Ganapathiraju MK, Dexheimer P, Leatherbury L, Khalifa O, Bhagat A, Zahid M, Pu W, Watkins S, Grossfeld P, Murray SA, Porter GA Jr, Tsang M, Martin LJ, Benson DW, Aronow BJ, Lo CW
Nature genetics49(7)1152-1159(2017 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pcdha9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdha9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu10835	NM_138661.1 Latest version!	Mus musculus protocadherin alpha 9 (Pcdha9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$580.30 $829.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pcdha9 ( NM_138661.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_619602.1 Mus musculus protocadherin alpha 9 (Pcdha9), mRNA.

Price & Availability↑

CloneID	OMu10835
Clone ID Related Accession (Same CDS sequence)	NM_138661.1
Accession Version	NM_138661.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2940bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-19
Organism	Mus musculus(house mouse)
Product	protocadherin alpha-9 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY013767.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AY013767.1, AB008183.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END##

ATGAGATTAG GAAATCGACC AGAAGATATT AGAACTTGTG TGCATCTCAG ATGGCACATT 
CATGGACTTT TAAGACAAGA GAATGCTTCA GTGGTGATCT CCAAATGTCT GAGGCATGGA 
GCTTGGCGCC TGCTACTTTG GCTTCTGCTC CTTGCAACAT GGGATGTAGG GAGCGGCCAG 
CTTCACTACT CTGTCCCAGA GGAGGCCAAA CACGGCACCT TCGTGGGCCG CATCGCGCAG 
GACTTGGGGC TGGAGCTGGC TGAACTGGTG CCCCGCCTGT TCAGGGTGGT GTCCAAGGAC 
CGCGGGGACC TTCTGGAGGT AAATCTTCAG AATGGCATTT TGTTTGTGAA TTCTCGGATC 
GACCGGGAGG AGCTGTGCGG GCAGAACGCG GAGTGTAGCA TCCACCTGGA GGTGATCGTG 
GACAGGCCGC TGCAGGTTTT CCACGTGGAG GTGGAGGTGA GGGACATTAA TGACAACCCT 
CCGATATTCT CCGTAGCGGA ACAAAAGATC TTGGTAGCTG AATCTAGACT GCTTGATTCT 
CGATTTCCAC TAGAAGGCGC CTCTGATGCA GATGTTGGAG AGAACTCTAT GCTTACTTAC 
AAACTCAGTT CAAATGAGTT TTTTATCCTT GATATTGTAA ACAAAAGAGG CAAAGGCAAA 
TTTCCAGTGC TTGTTCTTCG AAAACTGATA GATCGAGAAG AAAATCCTCA GCTAAAGTTG 
CTACTGACAG CAACCGATGG AGGCAAACCT GAATTTACGG GATCGGTTTC TCTGTTGATC 
CAGGTGTTGG ATGTTAATGA CAATGCTCCT GTGTTTGACA GATCTGTTTA CGAAGTTAAG 
ATGTATGAGA ATCAAGAGAA TAAAACCTTA GTAATATGGC TGAATGCTAC TGACTCAGAT 
GAAGGAATAA ACAAAGAAGT GGAGTATTCA TTTAGCTCTT TAGCCTCATC GATTATAAGA 
CAGAAATTTC TAATAAACGA AAAGACTGGA GAGATAAAAA TAAACGGCGC TATTGACTTT 
GAGGAGAGTA ACAATTATGA AATTCACGTG GATGCTACAG ATAAAGGATA CCCACCTATG 
GTTGCTCACT GCACCGTACT CGTGGAAATC TTGGATGAAA ATGATAACGC ACCGGAGATA 
GTCCTTACTT CTTTGTCTTT GCCGGTGAAA GAAGATGCTC CTTTGGGCTC TGTAATCGCC 
CTGATCAGCG TGTCAGACAA AGACTCTGGT GTCAATGGAC AGGTGACCTG CTCCTTGACT 
AACCATGTCC CCTTCAAGTT GGTGTCCACC TTCAAGAATT ACTATTCCCT CGTGCTGGAC 
AGCGCCCTGG ACCGAGAGAC CACAGCTGAC TATAAGGTGG TGGTGACAGC CCGCGACGGG 
GGCTCGCCCT CTCTGTGGGC CACGGCCAGC GTGTCCGTGG AGGTGGCTGA CGTGAACGAC 
AATGCTCCTG CATTCGCACA TCCCGAATAC ACGGTGTTCG TGAAGGAGAA CAACCCGCCT 
GGAGTGCACA TCTTCACAGT ATTGGCGGTG GATGCTGACG CACAGGAGAA CGCGCTGGTG 
TCCTACTCGC TGGTGGAGCG GAGGGTGGGC GAGCGCTTGC TGTCGAGCTA TGTGTCTGTG 
CACGCGGAGA GCGGCAAGGT GTTCGCGCTG CAGCCTCTGG ACCATGAGGA GCTGGAGCTG 
CTGCAGTTCC AGGTGAGCGC GCGGGATGCT GGTGTGCCTG CCCTGGGCAG CAATGTGACT 
CTGCAGGTGT TTGTGCAGGA TGAGAATGAC AATCCGCCCA CGCTGCTCGG ACATCAGTCA 
GGTGGACCTG CTGGCGAATT TAGCCAGCTT GTTTCGCGGT CAGTGGGTGC GGGACACGTG 
GTGTCAAAGG TGCGCGCGGT GGATGCGGAC TCCGGTTACA ACGCGTGGCT GTCTTATGAG 
CTCCACCCAA CTGTGGGCGC TCGCAGCCCT TTCCGTGTCG GTCTCTACAC GGGTGAGATC 
AGCATGACCC GAGCCCTGGA TGAATCTGAT TTACCGCGCC AGCGCCTATT GGTGTTGGTG 
AAGGACCACG GCGAACCTAT GTTGATCGCC ACTGCCACCG TTTTGGTGTC CCTGGTGGAG 
AACGGCCAGG TGCCAAAAGC TTCTTCCCAG GGGTTGCCCA ACTCCTCCCG CAGGGAGGCG 
TCGCTGATGG ATGTCAATGT ATACCTGATC ATTGCCATTT GCGCAGTGTC CAGCCTGTTG 
GTGCTCACGC TGCTGCTATA CACAGCCCTG CGCTGCTCAG CTGTGCCCAT GCAGGCTGGG 
TGCGGGCTTG GGAAGCCCAC TCTGGTGTGC TCAAGCGCTG TGGGGACCTG GTCATACTCA 
CAGCAGAGAC AGCAGCGAGT ATGCTCAGGA GAGGGTCCGC CCAAAACCGA CCTCATGGCT 
TTTAGCCCCA GTCTTACACC TTGCCCAGTG GCCGAAGTGG GAATGGAAAG TCATTCTGTT 
GGAGGAGACG TGCCCGGAAA GCCCCGGCAG CCCAACCCTG ACTGGCGCTA CTCTGCCTCG 
CTAAGAGCAG GCATGCACAG CTCTGTGCAC CTGGAGGAGG CTGGCATTCT ACGGGCTGGT 
CCAGGAGGGC CTGATCAGCA GTGGCCAACA GTATCCAGTG CAACACCAGA ACCTGAGGCA 
GGAGAGGTGT CCCCTCCGGT GGGCGCCGGT GTCAACAGCA ACAGCTGGAC CTTTAAATAC 
GGACCAGGCA ACCCCAAACA GTCCGGTCCC GGTGAGTTGC CAGACAAATT CATTATCCCA 
GGATCTCCTG CAATCATCTC CATCCGGCAG GAGCCTGCTA ACAACCAAAT TGACAAAAGC 
GATTTTATAA CCTTCGGCAA AAAGGAGGAG ACCAAGAAAA AGAAGAAAAA GAAGAAGGGT 
AACAAGACCC AGGAGAAAAA AGAGAAAGGG AACAGCACGA CGGACAACAG TGACCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_619602.1
CDS	1..2940
Translation	MRLGNRPEDIRTCVHLRWHIHGLLRQENASVVISKCLRHGAWRLLLWLLLLATWDVGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRVVSKDRGDLLEVNLQNGILFVNSRIDREELCGQNAECSIHLEVIVDRPLQVFHVEVEVRDINDNPPIFSVAEQKILVAESRLLDSRFPLEGASDADVGENSMLTYKLSSNEFFILDIVNKRGKGKFPVLVLRKLIDREENPQLKLLLTATDGGKPEFTGSVSLLIQVLDVNDNAPVFDRSVYEVKMYENQENKTLVIWLNATDSDEGINKEVEYSFSSLASSIIRQKFLINEKTGEIKINGAIDFEESNNYEIHVDATDKGYPPMVAHCTVLVEILDENDNAPEIVLTSLSLPVKEDAPLGSVIALISVSDKDSGVNGQVTCSLTNHVPFKLVSTFKNYYSLVLDSALDRETTADYKVVVTARDGGSPSLWATASVSVEVADVNDNAPAFAHPEYTVFVKENNPPGVHIFTVLAVDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVQDENDNPPTLLGHQSGGPAGEFSQLVSRSVGAGHVVSKVRAVDADSGYNAWLSYELHPTVGARSPFRVGLYTGEISMTRALDESDLPRQRLLVLVKDHGEPMLIATATVLVSLVENGQVPKASSQGLPNSSRREASLMDVNVYLIIAICAVSSLLVLTLLLYTALRCSAVPMQAGCGLGKPTLVCSSAVGTWSYSQQRQQRVCSGEGPPKTDLMAFSPSLTPCPVAEVGMESHSVGGDVPGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Target ORF information:

RefSeq Version	NM_138661.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus protocadherin alpha 9 (Pcdha9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_138661.1

ORF Insert Sequence:

ATGAGATTAG GAAATCGACC AGAAGATATT AGAACTTGTG TGCATCTCAG ATGGCACATT 
CATGGACTTT TAAGACAAGA GAATGCTTCA GTGGTGATCT CCAAATGTCT GAGGCATGGA 
GCTTGGCGCC TGCTACTTTG GCTTCTGCTC CTTGCAACAT GGGATGTAGG GAGCGGCCAG 
CTTCACTACT CTGTCCCAGA GGAGGCCAAA CACGGCACCT TCGTGGGCCG CATCGCGCAG 
GACTTGGGGC TGGAGCTGGC TGAACTGGTG CCCCGCCTGT TCAGGGTGGT GTCCAAGGAC 
CGCGGGGACC TTCTGGAGGT AAATCTTCAG AATGGCATTT TGTTTGTGAA TTCTCGGATC 
GACCGGGAGG AGCTGTGCGG GCAGAACGCG GAGTGTAGCA TCCACCTGGA GGTGATCGTG 
GACAGGCCGC TGCAGGTTTT CCACGTGGAG GTGGAGGTGA GGGACATTAA TGACAACCCT 
CCGATATTCT CCGTAGCGGA ACAAAAGATC TTGGTAGCTG AATCTAGACT GCTTGATTCT 
CGATTTCCAC TAGAAGGCGC CTCTGATGCA GATGTTGGAG AGAACTCTAT GCTTACTTAC 
AAACTCAGTT CAAATGAGTT TTTTATCCTT GATATTGTAA ACAAAAGAGG CAAAGGCAAA 
TTTCCAGTGC TTGTTCTTCG AAAACTGATA GATCGAGAAG AAAATCCTCA GCTAAAGTTG 
CTACTGACAG CAACCGATGG AGGCAAACCT GAATTTACGG GATCGGTTTC TCTGTTGATC 
CAGGTGTTGG ATGTTAATGA CAATGCTCCT GTGTTTGACA GATCTGTTTA CGAAGTTAAG 
ATGTATGAGA ATCAAGAGAA TAAAACCTTA GTAATATGGC TGAATGCTAC TGACTCAGAT 
GAAGGAATAA ACAAAGAAGT GGAGTATTCA TTTAGCTCTT TAGCCTCATC GATTATAAGA 
CAGAAATTTC TAATAAACGA AAAGACTGGA GAGATAAAAA TAAACGGCGC TATTGACTTT 
GAGGAGAGTA ACAATTATGA AATTCACGTG GATGCTACAG ATAAAGGATA CCCACCTATG 
GTTGCTCACT GCACCGTACT CGTGGAAATC TTGGATGAAA ATGATAACGC ACCGGAGATA 
GTCCTTACTT CTTTGTCTTT GCCGGTGAAA GAAGATGCTC CTTTGGGCTC TGTAATCGCC 
CTGATCAGCG TGTCAGACAA AGACTCTGGT GTCAATGGAC AGGTGACCTG CTCCTTGACT 
AACCATGTCC CCTTCAAGTT GGTGTCCACC TTCAAGAATT ACTATTCCCT CGTGCTGGAC 
AGCGCCCTGG ACCGAGAGAC CACAGCTGAC TATAAGGTGG TGGTGACAGC CCGCGACGGG 
GGCTCGCCCT CTCTGTGGGC CACGGCCAGC GTGTCCGTGG AGGTGGCTGA CGTGAACGAC 
AATGCTCCTG CATTCGCACA TCCCGAATAC ACGGTGTTCG TGAAGGAGAA CAACCCGCCT 
GGAGTGCACA TCTTCACAGT ATTGGCGGTG GATGCTGACG CACAGGAGAA CGCGCTGGTG 
TCCTACTCGC TGGTGGAGCG GAGGGTGGGC GAGCGCTTGC TGTCGAGCTA TGTGTCTGTG 
CACGCGGAGA GCGGCAAGGT GTTCGCGCTG CAGCCTCTGG ACCATGAGGA GCTGGAGCTG 
CTGCAGTTCC AGGTGAGCGC GCGGGATGCT GGTGTGCCTG CCCTGGGCAG CAATGTGACT 
CTGCAGGTGT TTGTGCAGGA TGAGAATGAC AATCCGCCCA CGCTGCTCGG ACATCAGTCA 
GGTGGACCTG CTGGCGAATT TAGCCAGCTT GTTTCGCGGT CAGTGGGTGC GGGACACGTG 
GTGTCAAAGG TGCGCGCGGT GGATGCGGAC TCCGGTTACA ACGCGTGGCT GTCTTATGAG 
CTCCACCCAA CTGTGGGCGC TCGCAGCCCT TTCCGTGTCG GTCTCTACAC GGGTGAGATC 
AGCATGACCC GAGCCCTGGA TGAATCTGAT TTACCGCGCC AGCGCCTATT GGTGTTGGTG 
AAGGACCACG GCGAACCTAT GTTGATCGCC ACTGCCACCG TTTTGGTGTC CCTGGTGGAG 
AACGGCCAGG TGCCAAAAGC TTCTTCCCAG GGGTTGCCCA ACTCCTCCCG CAGGGAGGCG 
TCGCTGATGG ATGTCAATGT ATACCTGATC ATTGCCATTT GCGCAGTGTC CAGCCTGTTG 
GTGCTCACGC TGCTGCTATA CACAGCCCTG CGCTGCTCAG CTGTGCCCAT GCAGGCTGGG 
TGCGGGCTTG GGAAGCCCAC TCTGGTGTGC TCAAGCGCTG TGGGGACCTG GTCATACTCA 
CAGCAGAGAC AGCAGCGAGT ATGCTCAGGA GAGGGTCCGC CCAAAACCGA CCTCATGGCT 
TTTAGCCCCA GTCTTACACC TTGCCCAGTG GCCGAAGTGG GAATGGAAAG TCATTCTGTT 
GGAGGAGACG TGCCCGGAAA GCCCCGGCAG CCCAACCCTG ACTGGCGCTA CTCTGCCTCG 
CTAAGAGCAG GCATGCACAG CTCTGTGCAC CTGGAGGAGG CTGGCATTCT ACGGGCTGGT 
CCAGGAGGGC CTGATCAGCA GTGGCCAACA GTATCCAGTG CAACACCAGA ACCTGAGGCA 
GGAGAGGTGT CCCCTCCGGT GGGCGCCGGT GTCAACAGCA ACAGCTGGAC CTTTAAATAC 
GGACCAGGCA ACCCCAAACA GTCCGGTCCC GGTGAGTTGC CAGACAAATT CATTATCCCA 
GGATCTCCTG CAATCATCTC CATCCGGCAG GAGCCTGCTA ACAACCAAAT TGACAAAAGC 
GATTTTATAA CCTTCGGCAA AAAGGAGGAG ACCAAGAAAA AGAAGAAAAA GAAGAAGGGT 
AACAAGACCC AGGAGAAAAA AGAGAAAGGG AACAGCACGA CGGACAACAG TGACCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The complex genetics of hypoplastic left heart syndrome.
Nature genetics49(7)1152-1159(2017 Jul)
Liu X,Yagi H,Saeed S,Bais AS,Gabriel GC,Chen Z,Peterson KA,Li Y,Schwartz MC,Reynolds WT,Saydmohammed M,Gibbs B,Wu Y,Devine W,Chatterjee B,Klena NT,Kostka D,de Mesy Bentley KL,Ganapathiraju MK,Dexheimer P,Leatherbury L,Khalifa O,Bhagat A,Zahid M,Pu W,Watkins S,Grossfeld P,Murray SA,Porter GA Jr,Tsang M,Martin LJ,Benson DW,Aronow BJ,Lo CW

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Pcdha9 cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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