Hoxd1 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Hoxd1
Entrez Gene ID	15429
Full Name	homeobox D1
Synonyms	Hox-4.9
General protein information	Preferred Names homeobox D1 Names homeobox protein Hox-D1 homeo box D1 homeobox protein Hox-4.9
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 2 Map Location: 2 C3\|2 44.13 cM

mRNA and Protein(s)

mRNA	Protein	Name
NM_010467.2	NP_034597.2	homeobox protein Hox-D1

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Hoxd1	NP_001099354.1
Mus musculus (house mouse)	Hoxd1	NP_034597.2
Pan troglodytes (chimpanzee)	HOXD1	XP_001144367.2
Canis lupus familiaris (dog)	HOXD1	XP_852467.3
Xenopus tropicalis (tropical clawed frog)	hoxd1	NP_001016678.1
Homo sapiens (human)	HOXD1	NP_078777.1
Bos taurus (cattle)	HOXD1	XP_002685353.1

Gene Ontology
Bibliography

Related articles in PubMed

Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System.
Memic F, Knoflach V, Morarach K, Sadler R, Laranjeira C, Hjerling-Leffler J, Sundstr?m E, Pachnis V, Marklund U
Gastroenterology(2017 Oct)

New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.
Naruse C, Shibata S, Tamura M, Kawaguchi T, Abe K, Sugihara K, Kato T, Nishiuchi T, Wakana S, Ikawa M, Asano M
FASEB journal : official publication of the Federation of American Societies for Experimental Biology31(6)2252-2266(2017 06)

Cdx is crucial for the timing mechanism driving colinear Hox activation and defines a trunk segment in the Hox cluster topology.
Neijts R, Amin S, van Rooijen C, Deschamps J
Developmental biology422(2)146-154(2017 02)

Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche.
Amin S, Neijts R, Simmini S, van Rooijen C, Tan SC, Kester L, van Oudenaarden A, Creyghton MP, Deschamps J
Cell reports17(12)3165-3177(2016 12)

BDNF and NT4 play interchangeable roles in gustatory development.
Huang T, Krimm RF
Developmental biology386(2)308-20(2014 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Mice lacking Hoxd1 displayed altered nociceptor circuitry that resembles that normally found in chicks.
Title: An evolving NGF-Hoxd1 signaling pathway mediates development of divergent neural circuits in vertebrates.

Hox1b contains the cis-acting elements sufficient to initiate ectopic local nuclear reorganisation and chromatin decondensation and to break Hoxd colinearity in the primitive streak region of the early embryo.
Title: Ectopic nuclear reorganisation driven by a Hoxb1 transgene transposed into Hoxd.

myelin oligodendrocyte glycoprotein may be a target of Hoxd1
Title: Hoxd1 is expressed by oligodendroglial cells and binds to a region of the human myelin oligodendrocyte glycoprotein promoter in vitro.

HOXD and Gli3 gene interactions control the limb apical ectodermal ridge via Fgf10
Title: Interactions between HOXD and Gli3 genes control the limb apical ectodermal ridge via Fgf10.

The following Hoxd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hoxd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu19984	NM_010467.2 Latest version!	Mus musculus homeobox D1 (Hoxd1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Hoxd1 ( NM_010467.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_034597.2 Mus musculus homeobox D1 (Hoxd1), mRNA.

Price & Availability↑

CloneID	OMu19984
Clone ID Related Accession (Same CDS sequence)	NM_010467.2
Accession Version	NM_010467.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 987bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-20
Organism	Mus musculus(house mouse)
Product	homeobox protein Hox-D1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL928733.14, BC120537.1 and BE956647.1. On Aug 23, 2006 this sequence version replaced NM_010467.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: X60034.1, BC120537.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849381, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGAGCTCTT ACCTGGAGTA CGTGTCGTGC GCCGCGGGCG GTGGCAGCGG AGGGGTAGGC 
GGCGACGTGC TCGGCTTCGC ACCCAAGTTC TGCCGCGCCG ACGCGCGCCC TGTGGCCCTG 
CAGCCGGCCT TCCCCCTGGG CAGCGGAGAC GGCGCCTTCG TGAGCTGCCT GCCCCTGGCC 
ACCGCTCGGC CCACGCCGTC GCCTCCCGCA GGCCCCGCTC AGTCCCCGGT CCCACAGCCC 
GCCGCGCCCC GGTACGCGCC CTGCACCCTG GAAGGCGCCT ACGAGCGGGG CGCCGCACCT 
GCCTCTGCCG CCGAGTATGG CTTCTTGGGG TCCGGGCCGG CGTTTGACTT CCCGGGCGCA 
CTTGGGAGAG CGGCGGACGA GGGCGGGGCG CACGTCCACT ATGCCACCTC GGCGGTCTTC 
TCCGGCGGGG GATCATTCCT GCTCAGCGGC CAGGTGGACT TCGCTGCCTT TGGCGAGCCT 
GGCCCCTTCC CCGCGTGTCT CAAGGAGCCC GCAGACGGCC ACCCCGGGCC CTTTCAGACT 
GTGTCCCCGG CCCCTGGAGC CTGCCCCAAG CCGGCCTCTC CCACCTCCAG CCTCCCGGCC 
GCCCACAGCA CTTTCGAGTG GATGAAAGTG AAGAGGAACG CCCCCAAGAA AAGCAAACTG 
TCCGAATATG GAGCCACAAG CCCTCCCAGT GCCATCCGCA CAAATTTCAG CACCAAGCAA 
CTGACAGAGC TAGAGAAAGA GTTTCATTTC AATAAGTACC TAACTAGAGC CCGACGCATC 
GAGATAGCCA ACTGTTTACA GCTGAATGAC ACCCAGGTCA AAATCTGGTT CCAGAACCGT 
AGGATGAAGC AGAAGAAGAG GGAACGAGAG GGGCTTCTGG CCACAGCTGC CTCTGTGGCC 
TCGATTAAGC TTCCCCGGTC AGAAACAAGT CCCATCAAAT CTGGCCGGAA TCTAGGAAGC 
CCTTCTCAGG CTCAAGAGCC TTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_034597.2
CDS	123..1109
Translation	MSSYLEYVSCAAGGGSGGVGGDVLGFAPKFCRADARPVALQPAFPLGSGDGAFVSCLPLATARPTPSPPAGPAQSPVPQPAAPRYAPCTLEGAYERGAAPASAAEYGFLGSGPAFDFPGALGRAADEGGAHVHYATSAVFSGGGSFLLSGQVDFAAFGEPGPFPACLKEPADGHPGPFQTVSPAPGACPKPASPTSSLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPPSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGLLATAASVASIKLPRSETSPIKSGRNLGSPSQAQEPS

Target ORF information:

RefSeq Version	NM_010467.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus homeobox D1 (Hoxd1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_010467.2

ORF Insert Sequence:

ATGAGCTCTT ACCTGGAGTA CGTGTCGTGC GCCGCGGGCG GTGGCAGCGG AGGGGTAGGC 
GGCGACGTGC TCGGCTTCGC ACCCAAGTTC TGCCGCGCCG ACGCGCGCCC TGTGGCCCTG 
CAGCCGGCCT TCCCCCTGGG CAGCGGAGAC GGCGCCTTCG TGAGCTGCCT GCCCCTGGCC 
ACCGCTCGGC CCACGCCGTC GCCTCCCGCA GGCCCCGCTC AGTCCCCGGT CCCACAGCCC 
GCCGCGCCCC GGTACGCGCC CTGCACCCTG GAAGGCGCCT ACGAGCGGGG CGCCGCACCT 
GCCTCTGCCG CCGAGTATGG CTTCTTGGGG TCCGGGCCGG CGTTTGACTT CCCGGGCGCA 
CTTGGGAGAG CGGCGGACGA GGGCGGGGCG CACGTCCACT ATGCCACCTC GGCGGTCTTC 
TCCGGCGGGG GATCATTCCT GCTCAGCGGC CAGGTGGACT TCGCTGCCTT TGGCGAGCCT 
GGCCCCTTCC CCGCGTGTCT CAAGGAGCCC GCAGACGGCC ACCCCGGGCC CTTTCAGACT 
GTGTCCCCGG CCCCTGGAGC CTGCCCCAAG CCGGCCTCTC CCACCTCCAG CCTCCCGGCC 
GCCCACAGCA CTTTCGAGTG GATGAAAGTG AAGAGGAACG CCCCCAAGAA AAGCAAACTG 
TCCGAATATG GAGCCACAAG CCCTCCCAGT GCCATCCGCA CAAATTTCAG CACCAAGCAA 
CTGACAGAGC TAGAGAAAGA GTTTCATTTC AATAAGTACC TAACTAGAGC CCGACGCATC 
GAGATAGCCA ACTGTTTACA GCTGAATGAC ACCCAGGTCA AAATCTGGTT CCAGAACCGT 
AGGATGAAGC AGAAGAAGAG GGAACGAGAG GGGCTTCTGG CCACAGCTGC CTCTGTGGCC 
TCGATTAAGC TTCCCCGGTC AGAAACAAGT CCCATCAAAT CTGGCCGGAA TCTAGGAAGC 
CCTTCTCAGG CTCAAGAGCC TTCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System.
Gastroenterology(2017 Oct)
Memic F,Knoflach V,Morarach K,Sadler R,Laranjeira C,Hjerling-Leffler J,Sundstr?m E,Pachnis V,Marklund U

New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology31(6)2252-2266(2017 06)
Naruse C,Shibata S,Tamura M,Kawaguchi T,Abe K,Sugihara K,Kato T,Nishiuchi T,Wakana S,Ikawa M,Asano M

Cdx is crucial for the timing mechanism driving colinear Hox activation and defines a trunk segment in the Hox cluster topology.
Developmental biology422(2)146-154(2017 02)
Neijts R,Amin S,van Rooijen C,Deschamps J

Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche.
Cell reports17(12)3165-3177(2016 12)
Amin S,Neijts R,Simmini S,van Rooijen C,Tan SC,Kester L,van Oudenaarden A,Creyghton MP,Deschamps J

BDNF and NT4 play interchangeable roles in gustatory development.
Developmental biology386(2)308-20(2014 Feb)
Huang T,Krimm RF

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Hoxd1 cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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