Cdyl cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Cdyl
Entrez Gene ID	12593
Full Name	chromodomain protein, Y chromosome-like
Synonyms	AI325931
General protein information	Preferred Names chromodomain protein, Y chromosome-like Names chromodomain Y-like protein CDY-like crotonyl-CoA hydratase putative histone acetyltransferase Cdyl
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 13 Map Location: 13 A3.3\|13 14.39 cM

mRNA and Protein(s)

mRNA	Protein	Name
NM_009881.3	NP_034011.1	chromodomain Y-like protein isoform 1
XM_006516536.3	XP_006516599.1	chromodomain Y-like protein isoform X1
XM_030247135.1	XP_030102995.1	chromodomain Y-like protein isoform X2
NM_001123386.1	NP_001116858.1	chromodomain Y-like protein isoform 2
XM_006516536.2	XP_006516599.1	chromodomain Y-like protein isoform X1

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	cdyl	XP_696879.5
Xenopus tropicalis (tropical clawed frog)	cdyl	XP_002936475.2
Homo sapiens (human)	CDYL	NP_004815.3
	CDYL	XP_001119034.2
Rattus norvegicus (Norway rat)	Cdyl	NP_001014167.1
Bos taurus (cattle)	CDYL	NP_001095693.1
Mus musculus (house mouse)	Cdyl	NP_034011.1
Gallus gallus (chicken)	CDYL	XP_418964.2
Pan troglodytes (chimpanzee)	CDYL	XP_518216.2
Canis lupus familiaris (dog)	CDYL	XP_848773.1

Gene Ontology
Bibliography

Related articles in PubMed

Chromodomain Protein CDYL Acts as a Crotonyl-CoA Hydratase to Regulate Histone Crotonylation and Spermatogenesis.
Liu S, Yu H, Liu Y, Liu X, Zhang Y, Bu C, Yuan S, Chen Z, Xie G, Li W, Xu B, Yang J, He L, Jin T, Xiong Y, Sun L, Liu X, Han C, Cheng Z, Liang J, Shang Y
Molecular cell67(5)853-866.e5(2017 Sep)

PRDM9 interactions with other proteins provide a link between recombination hotspots and the chromosomal axis in meiosis.
Parvanov ED, Tian H, Billings T, Saxl RL, Spruce C, Aithal R, Krejci L, Paigen K, Petkov PM
Molecular biology of the cell28(3)488-499(2017 Feb)

CDYL Deficiency Disrupts Neuronal Migration and Increases Susceptibility to Epilepsy.
Qin R, Cao S, Lyu T, Qi C, Zhang W, Wang Y
Cell reports18(2)380-390(2017 01)

Cdyl, a new partner of the inactive X chromosome and potential reader of H3K27me3 and H3K9me2.
Escamilla-Del-Arenal M, da Rocha ST, Spruijt CG, Masui O, Renaud O, Smits AH, Margueron R, Vermeulen M, Heard E
Molecular and cellular biology33(24)5005-20(2013 Dec)

Olig2 targets chromatin remodelers to enhancers to initiate oligodendrocyte differentiation.
Yu Y, Chen Y, Kim B, Wang H, Zhao C, He X, Liu L, Liu W, Wu LM, Mao M, Chan JR, Wu J, Lu QR
Cell152(1-2)248-61(2013 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

CDYL negatively regulates histone crotonylation by acting as a crotonyl-CoA hydratase to convert crotonyl-CoA to beta-hydroxybutyryl-CoA and suggest role in spermatogenesis.
Title: Chromodomain Protein CDYL Acts as a Crotonyl-CoA Hydratase to Regulate Histone Crotonylation and Spermatogenesis.

These results demonstrate that CDYL is a regulator of neuronal migration and shed light on the pathogenesis of seizure-related neurodevelopmental disorders.
Title: CDYL Deficiency Disrupts Neuronal Migration and Increases Susceptibility to Epilepsy.

A combination of H3K9me2 and H3K27me3 recruits Cdyl to the inactivated X chromosome, and this, in turn, may facilitate propagation of the H3K9me2 mark by anchoring G9a.
Title: Cdyl, a new partner of the inactive X chromosome and potential reader of H3K27me3 and H3K9me2.

The results of this study provided some insight into the molecular function of the Cdyl gene, showing that it inhibited the neuronal differentiation of iPS cells.
Title: Generation and neuronal differentiation of induced pluripotent stem cells in Cdyl-/- mice.

Cdyl may participate in the global chromatin remodelling that occurs in spermatogenesis.
Title: Cdyl: a new transcriptional co-repressor.

The following Cdyl gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cdyl cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMu21459	NM_009881.3 Latest version!	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00
OMu86215	XM_030247135.1 Latest version!	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
OMu21460	NM_001123386.1 Latest version!	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$307.30 $439.00
OMu48315	XM_006516536.3 Latest version!	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00
View Old Accession Versions >>
OMu48315	XM_006516536.2	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Cdyl ( NM_009881.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_034011.1 Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant 1, mRNA.

Price & Availability↑

CloneID	OMu21459
Clone ID Related Accession (Same CDS sequence)	NM_009881.3
Accession Version	NM_009881.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-26
Organism	Mus musculus(house mouse)
Product	chromodomain Y-like protein isoform 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY090531.1, BC055103.1, AK028162.1 and BG229669.1. On Apr 17, 2008 this sequence version replaced NM_009881.2. Transcript Variant: This variant (1) encodes the longer isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF081261.1, AF081260.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END##

ATGGGCATAG GCAATAGCCA GCCTAATTCA CAGGAAGCCC AGCTCTGCAC ACTTCCAGAG 
AAAGCTGAAC AACCTACTGA TGATAACACC TGCCAGCAAA ATAATGTGGT TCCTGCAACA 
GTCTCAGAAC CCGATCAAGC GTCCCCTGCA ATTCAAGACG CGGAGACTCA GGTGGAAAGT 
ATCGTTGACA AAAGGAAAAA CAAGAAAGGG AAGACAGAAT ATCTGGTGCG GTGGAAAGGC 
TATGACAGTG AGGATGACAC GTGGGAGCCT GAGCAGCACC TGGTGAACTG TGAGGAATAC 
ATCCATGACT TCAACCGGCG CCACAACGAG AGGCAAAAGG AAGGTAGCCT GGCTCGTGCC 
AGCAGAGCCT CCCCCAGCAA CGCCCGGAAG CAGATTTCCA GGTCCACCCA CAGCACTCTC 
TCCAAGACCA ACTCCAAAGC ACTTGTGGTA GGCAAAGATC ATGAGTCCAA AAGCAGCCAG 
CTGTTGGCTG CCAGCCAGAA GTTCAGGAAA AACCCAGCCC CATCTCTTGC AAACCGCAAG 
AACATGGACC TCGCCAAGTC AGGGATCAAA ATTCTCGTGC CTAAGAGCCC CGTTAAGGGC 
AGGACCTCGG TTGATGGCTT TCAGGGGGAG AGCCCCGAGA AGCTGGACCC TGTGGATCAG 
GGTGCCGAGG ACACTGTAGC CCCAGAGGTG ACTGCAGAGA AGCCCACTGG GGCTTTGCTG 
GGCCCTGGTG CGGAGCGAGC CAGGATGGGG AGCAGGCCCC GAATACATCC ACTAGTGCCT 
CAGGTTTCTG GCCCCGTGAC TGCTGCCATG GCCACAGGCT TAGCTGTTAA TGGAAAAGGT 
ACATCTCCAT TCATGGATGC GCTAGCAGCC AACGGAACAG TCACCATACA GACATCCGTA 
ACAGGAGTGA CAGCCGGGAA AAGGAAATTT ATTGACGACA GAAGAGACCA ACCTTTTGAC 
AAGCGGTTGC GTTTCAGTGT GAGGCAGACA GAGAGTGCCT ACAGATACAG AGATATTGTC 
GTCAGGAAGC AAGATGGCTT CACCCACATC TTGTTATCCA CAAAATCGTC AGAGAATAAC 
TCACTAAACC CAGAGGTGAT GAAAGAAGTG CAGAGCGCCC TGAGCACAGC TGCAGCCGAC 
GACAGCAAGC TGGTTCTGCT CAGCGCCGTG GGCAGCGTCT TCTGCTGTGG TCTGGACTTT 
ATTTATTTTA TTCGGCGCCT CACAGATGAC CGAAAGAGAG AAAGCACTAA AATGGCAGAC 
GCTATCAGAA ACTTCGTGAA TACTTTCATT CAGTTTAAGA AGCCTATTAT TGTAGCTGTT 
AATGGCCCAG CCATTGGACT AGGAGCATCC ATATTGCCTC TTTGTGATGT GGTTTGGGCT 
AACGAAAAGG CTTGGTTTCA AACACCCTAT ACCACCTTCG GACAGAGTCC AGATGGCTGC 
TCTACCGTTA TGTTTCCCAA GATTATGGGA GGAGCATCTG CGAATGAAAT GCTGTTCAGT 
GGGCGGAAGT TGACGGCACA GGAGGCCTGT GGCAAGGGTC TGGTCTCCCA GGTGTTTTGG 
CCAGGAACCT TCACACAGGA AGTCATGGTT CGAATCAAGG AGCTGGCTTC ATGTAACCCA 
GTTGTCCTGG AGGAATCCAA AGCCCTGGTG CGCTGCAATA TGAAGATGGA GCTAGAGCAG 
GCCAATGAGA GAGAATGTGA AGTGCTGAAG AAGATCTGGG GCTCCGCCCA GGGCATGGAC 
TCCATGTTAA AGTACTTACA GAGGAAAATC GATGAGTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_034011.1
CDS	267..2048
Translation	MGIGNSQPNSQEAQLCTLPEKAEQPTDDNTCQQNNVVPATVSEPDQASPAIQDAETQVESIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHNERQKEGSLARASRASPSNARKQISRSTHSTLSKTNSKALVVGKDHESKSSQLLAASQKFRKNPAPSLANRKNMDLAKSGIKILVPKSPVKGRTSVDGFQGESPEKLDPVDQGAEDTVAPEVTAEKPTGALLGPGAERARMGSRPRIHPLVPQVSGPVTAAMATGLAVNGKGTSPFMDALAANGTVTIQTSVTGVTAGKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMADAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLFSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF

Target ORF information:

RefSeq Version	NM_009881.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_009881.3

ORF Insert Sequence:

ATGGGCATAG GCAATAGCCA GCCTAATTCA CAGGAAGCCC AGCTCTGCAC ACTTCCAGAG 
AAAGCTGAAC AACCTACTGA TGATAACACC TGCCAGCAAA ATAATGTGGT TCCTGCAACA 
GTCTCAGAAC CCGATCAAGC GTCCCCTGCA ATTCAAGACG CGGAGACTCA GGTGGAAAGT 
ATCGTTGACA AAAGGAAAAA CAAGAAAGGG AAGACAGAAT ATCTGGTGCG GTGGAAAGGC 
TATGACAGTG AGGATGACAC GTGGGAGCCT GAGCAGCACC TGGTGAACTG TGAGGAATAC 
ATCCATGACT TCAACCGGCG CCACAACGAG AGGCAAAAGG AAGGTAGCCT GGCTCGTGCC 
AGCAGAGCCT CCCCCAGCAA CGCCCGGAAG CAGATTTCCA GGTCCACCCA CAGCACTCTC 
TCCAAGACCA ACTCCAAAGC ACTTGTGGTA GGCAAAGATC ATGAGTCCAA AAGCAGCCAG 
CTGTTGGCTG CCAGCCAGAA GTTCAGGAAA AACCCAGCCC CATCTCTTGC AAACCGCAAG 
AACATGGACC TCGCCAAGTC AGGGATCAAA ATTCTCGTGC CTAAGAGCCC CGTTAAGGGC 
AGGACCTCGG TTGATGGCTT TCAGGGGGAG AGCCCCGAGA AGCTGGACCC TGTGGATCAG 
GGTGCCGAGG ACACTGTAGC CCCAGAGGTG ACTGCAGAGA AGCCCACTGG GGCTTTGCTG 
GGCCCTGGTG CGGAGCGAGC CAGGATGGGG AGCAGGCCCC GAATACATCC ACTAGTGCCT 
CAGGTTTCTG GCCCCGTGAC TGCTGCCATG GCCACAGGCT TAGCTGTTAA TGGAAAAGGT 
ACATCTCCAT TCATGGATGC GCTAGCAGCC AACGGAACAG TCACCATACA GACATCCGTA 
ACAGGAGTGA CAGCCGGGAA AAGGAAATTT ATTGACGACA GAAGAGACCA ACCTTTTGAC 
AAGCGGTTGC GTTTCAGTGT GAGGCAGACA GAGAGTGCCT ACAGATACAG AGATATTGTC 
GTCAGGAAGC AAGATGGCTT CACCCACATC TTGTTATCCA CAAAATCGTC AGAGAATAAC 
TCACTAAACC CAGAGGTGAT GAAAGAAGTG CAGAGCGCCC TGAGCACAGC TGCAGCCGAC 
GACAGCAAGC TGGTTCTGCT CAGCGCCGTG GGCAGCGTCT TCTGCTGTGG TCTGGACTTT 
ATTTATTTTA TTCGGCGCCT CACAGATGAC CGAAAGAGAG AAAGCACTAA AATGGCAGAC 
GCTATCAGAA ACTTCGTGAA TACTTTCATT CAGTTTAAGA AGCCTATTAT TGTAGCTGTT 
AATGGCCCAG CCATTGGACT AGGAGCATCC ATATTGCCTC TTTGTGATGT GGTTTGGGCT 
AACGAAAAGG CTTGGTTTCA AACACCCTAT ACCACCTTCG GACAGAGTCC AGATGGCTGC 
TCTACCGTTA TGTTTCCCAA GATTATGGGA GGAGCATCTG CGAATGAAAT GCTGTTCAGT 
GGGCGGAAGT TGACGGCACA GGAGGCCTGT GGCAAGGGTC TGGTCTCCCA GGTGTTTTGG 
CCAGGAACCT TCACACAGGA AGTCATGGTT CGAATCAAGG AGCTGGCTTC ATGTAACCCA 
GTTGTCCTGG AGGAATCCAA AGCCCTGGTG CGCTGCAATA TGAAGATGGA GCTAGAGCAG 
GCCAATGAGA GAGAATGTGA AGTGCTGAAG AAGATCTGGG GCTCCGCCCA GGGCATGGAC 
TCCATGTTAA AGTACTTACA GAGGAAAATC GATGAGTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Cdyl ( XM_006516536.2 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006516599.1 Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMu48315
Clone ID Related Accession (Same CDS sequence)	XM_006516536.3 , XM_006516536.2
Accession Version	XM_006516536.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1710bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Mus musculus(house mouse)
Product	chromodomain Y-like protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000079.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006516536.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCTCCG AGGAGCTGTA CGAGCAAAAT AATGTGGTTC CTGCAACAGT CTCAGAACCC 
GATCAAGCGT CCCCTGCAAT TCAAGACGCG GAGACTCAGG TGGAAAGTAT CGTTGACAAA 
AGGAAAAACA AGAAAGGGAA GACAGAATAT CTGGTGCGGT GGAAAGGCTA TGACAGTGAG 
GATGACACGT GGGAGCCTGA GCAGCACCTG GTGAACTGTG AGGAATACAT CCATGACTTC 
AACCGGCGCC ACAACGAGAG GCAAAAGGAA GGTAGCCTGG CTCGTGCCAG CAGAGCCTCC 
CCCAGCAACG CCCGGAAGCA GATTTCCAGG TCCACCCACA GCACTCTCTC CAAGACCAAC 
TCCAAAGCAC TTGTGGTAGG CAAAGATCAT GAGTCCAAAA GCAGCCAGCT GTTGGCTGCC 
AGCCAGAAGT TCAGGAAAAA CCCAGCCCCA TCTCTTGCAA ACCGCAAGAA CATGGACCTC 
GCCAAGTCAG GGATCAAAAT TCTCGTGCCT AAGAGCCCCG TTAAGGGCAG GACCTCGGTT 
GATGGCTTTC AGGGGGAGAG CCCCGAGAAG CTGGACCCTG TGGATCAGGG TGCCGAGGAC 
ACTGTAGCCC CAGAGGTGAC TGCAGAGAAG CCCACTGGGG CTTTGCTGGG CCCTGGTGCG 
GAGCGAGCCA GGATGGGGAG CAGGCCCCGA ATACATCCAC TAGTGCCTCA GGTTTCTGGC 
CCCGTGACTG CTGCCATGGC CACAGGCTTA GCTGTTAATG GAAAAGGTAC ATCTCCATTC 
ATGGATGCGC TAGCAGCCAA CGGAACAGTC ACCATACAGA CATCCGTAAC AGGAGTGACA 
GCCGGGAAAA GGAAATTTAT TGACGACAGA AGAGACCAAC CTTTTGACAA GCGGTTGCGT 
TTCAGTGTGA GGCAGACAGA GAGTGCCTAC AGATACAGAG ATATTGTCGT CAGGAAGCAA 
GATGGCTTCA CCCACATCTT GTTATCCACA AAATCGTCAG AGAATAACTC ACTAAACCCA 
GAGGTGATGA AAGAAGTGCA GAGCGCCCTG AGCACAGCTG CAGCCGACGA CAGCAAGCTG 
GTTCTGCTCA GCGCCGTGGG CAGCGTCTTC TGCTGTGGTC TGGACTTTAT TTATTTTATT 
CGGCGCCTCA CAGATGACCG AAAGAGAGAA AGCACTAAAA TGGCAGACGC TATCAGAAAC 
TTCGTGAATA CTTTCATTCA GTTTAAGAAG CCTATTATTG TAGCTGTTAA TGGCCCAGCC 
ATTGGACTAG GAGCATCCAT ATTGCCTCTT TGTGATGTGG TTTGGGCTAA CGAAAAGGCT 
TGGTTTCAAA CACCCTATAC CACCTTCGGA CAGAGTCCAG ATGGCTGCTC TACCGTTATG 
TTTCCCAAGA TTATGGGAGG AGCATCTGCG AATGAAATGC TGTTCAGTGG GCGGAAGTTG 
ACGGCACAGG AGGCCTGTGG CAAGGGTCTG GTCTCCCAGG TGTTTTGGCC AGGAACCTTC 
ACACAGGAAG TCATGGTTCG AATCAAGGAG CTGGCTTCAT GTAACCCAGT TGTCCTGGAG 
GAATCCAAAG CCCTGGTGCG CTGCAATATG AAGATGGAGC TAGAGCAGGC CAATGAGAGA 
GAATGTGAAG TGCTGAAGAA GATCTGGGGC TCCGCCCAGG GCATGGACTC CATGTTAAAG 
TACTTACAGA GGAAAATCGA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006516599.1
CDS	559..2268
Translation	MASEELYEQNNVVPATVSEPDQASPAIQDAETQVESIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHNERQKEGSLARASRASPSNARKQISRSTHSTLSKTNSKALVVGKDHESKSSQLLAASQKFRKNPAPSLANRKNMDLAKSGIKILVPKSPVKGRTSVDGFQGESPEKLDPVDQGAEDTVAPEVTAEKPTGALLGPGAERARMGSRPRIHPLVPQVSGPVTAAMATGLAVNGKGTSPFMDALAANGTVTIQTSVTGVTAGKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMADAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLFSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF

Target ORF information:

RefSeq Version	XM_006516536.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006516536.2

ORF Insert Sequence:

ATGGCCTCCG AGGAGCTGTA CGAGCAAAAT AATGTGGTTC CTGCAACAGT CTCAGAACCC 
GATCAAGCGT CCCCTGCAAT TCAAGACGCG GAGACTCAGG TGGAAAGTAT CGTTGACAAA 
AGGAAAAACA AGAAAGGGAA GACAGAATAT CTGGTGCGGT GGAAAGGCTA TGACAGTGAG 
GATGACACGT GGGAGCCTGA GCAGCACCTG GTGAACTGTG AGGAATACAT CCATGACTTC 
AACCGGCGCC ACAACGAGAG GCAAAAGGAA GGTAGCCTGG CTCGTGCCAG CAGAGCCTCC 
CCCAGCAACG CCCGGAAGCA GATTTCCAGG TCCACCCACA GCACTCTCTC CAAGACCAAC 
TCCAAAGCAC TTGTGGTAGG CAAAGATCAT GAGTCCAAAA GCAGCCAGCT GTTGGCTGCC 
AGCCAGAAGT TCAGGAAAAA CCCAGCCCCA TCTCTTGCAA ACCGCAAGAA CATGGACCTC 
GCCAAGTCAG GGATCAAAAT TCTCGTGCCT AAGAGCCCCG TTAAGGGCAG GACCTCGGTT 
GATGGCTTTC AGGGGGAGAG CCCCGAGAAG CTGGACCCTG TGGATCAGGG TGCCGAGGAC 
ACTGTAGCCC CAGAGGTGAC TGCAGAGAAG CCCACTGGGG CTTTGCTGGG CCCTGGTGCG 
GAGCGAGCCA GGATGGGGAG CAGGCCCCGA ATACATCCAC TAGTGCCTCA GGTTTCTGGC 
CCCGTGACTG CTGCCATGGC CACAGGCTTA GCTGTTAATG GAAAAGGTAC ATCTCCATTC 
ATGGATGCGC TAGCAGCCAA CGGAACAGTC ACCATACAGA CATCCGTAAC AGGAGTGACA 
GCCGGGAAAA GGAAATTTAT TGACGACAGA AGAGACCAAC CTTTTGACAA GCGGTTGCGT 
TTCAGTGTGA GGCAGACAGA GAGTGCCTAC AGATACAGAG ATATTGTCGT CAGGAAGCAA 
GATGGCTTCA CCCACATCTT GTTATCCACA AAATCGTCAG AGAATAACTC ACTAAACCCA 
GAGGTGATGA AAGAAGTGCA GAGCGCCCTG AGCACAGCTG CAGCCGACGA CAGCAAGCTG 
GTTCTGCTCA GCGCCGTGGG CAGCGTCTTC TGCTGTGGTC TGGACTTTAT TTATTTTATT 
CGGCGCCTCA CAGATGACCG AAAGAGAGAA AGCACTAAAA TGGCAGACGC TATCAGAAAC 
TTCGTGAATA CTTTCATTCA GTTTAAGAAG CCTATTATTG TAGCTGTTAA TGGCCCAGCC 
ATTGGACTAG GAGCATCCAT ATTGCCTCTT TGTGATGTGG TTTGGGCTAA CGAAAAGGCT 
TGGTTTCAAA CACCCTATAC CACCTTCGGA CAGAGTCCAG ATGGCTGCTC TACCGTTATG 
TTTCCCAAGA TTATGGGAGG AGCATCTGCG AATGAAATGC TGTTCAGTGG GCGGAAGTTG 
ACGGCACAGG AGGCCTGTGG CAAGGGTCTG GTCTCCCAGG TGTTTTGGCC AGGAACCTTC 
ACACAGGAAG TCATGGTTCG AATCAAGGAG CTGGCTTCAT GTAACCCAGT TGTCCTGGAG 
GAATCCAAAG CCCTGGTGCG CTGCAATATG AAGATGGAGC TAGAGCAGGC CAATGAGAGA 
GAATGTGAAG TGCTGAAGAA GATCTGGGGC TCCGCCCAGG GCATGGACTC CATGTTAAAG 
TACTTACAGA GGAAAATCGA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Cdyl ( XM_030247135.1 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_030102995.1 Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X4, mRNA.

Price & Availability↑

CloneID	OMu86215
Clone ID Related Accession (Same CDS sequence)	XM_030247135.1
Accession Version	XM_030247135.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 930bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	chromodomain Y-like protein isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000079.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATGCGC TAGCAGCCAA CGGAACAGTC ACCATACAGA CATCCGTAAC AGGAGTGACA 
GCCGGGAAAA GGAAATTTAT TGACGACAGA AGAGACCAAC CTTTTGACAA GCGGTTGCGT 
TTCAGTGTGA GGCAGACAGA GAGTGCCTAC AGATACAGAG ATATTGTCGT CAGGAAGCAA 
GATGGCTTCA CCCACATCTT GTTATCCACA AAATCGTCAG AGAATAACTC ACTAAACCCA 
GAGGTGATGA AAGAAGTGCA GAGCGCCCTG AGCACAGCTG CAGCCGACGA CAGCAAGCTG 
GTTCTGCTCA GCGCCGTGGG CAGCGTCTTC TGCTGTGGTC TGGACTTTAT TTATTTTATT 
CGGCGCCTCA CAGATGACCG AAAGAGAGAA AGCACTAAAA TGGCAGACGC TATCAGAAAC 
TTCGTGAATA CTTTCATTCA GTTTAAGAAG CCTATTATTG TAGCTGTTAA TGGCCCAGCC 
ATTGGACTAG GAGCATCCAT ATTGCCTCTT TGTGATGTGG TTTGGGCTAA CGAAAAGGCT 
TGGTTTCAAA CACCCTATAC CACCTTCGGA CAGAGTCCAG ATGGCTGCTC TACCGTTATG 
TTTCCCAAGA TTATGGGAGG AGCATCTGCG AATGAAATGC TGTTCAGTGG GCGGAAGTTG 
ACGGCACAGG AGGCCTGTGG CAAGGGTCTG GTCTCCCAGG TGTTTTGGCC AGGAACCTTC 
ACACAGGAAG TCATGGTTCG AATCAAGGAG CTGGCTTCAT GTAACCCAGT TGTCCTGGAG 
GAATCCAAAG CCCTGGTGCG CTGCAATATG AAGATGGAGC TAGAGCAGGC CAATGAGAGA 
GAATGTGAAG TGCTGAAGAA GATCTGGGGC TCCGCCCAGG GCATGGACTC CATGTTAAAG 
TACTTACAGA GGAAAATCGA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_030102995.1
CDS	441..1370
Translation	MDALAANGTVTIQTSVTGVTAGKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMADAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLFSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF

Target ORF information:

RefSeq Version	XM_030247135.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_030247135.1

ORF Insert Sequence:

ATGGATGCGC TAGCAGCCAA CGGAACAGTC ACCATACAGA CATCCGTAAC AGGAGTGACA 
GCCGGGAAAA GGAAATTTAT TGACGACAGA AGAGACCAAC CTTTTGACAA GCGGTTGCGT 
TTCAGTGTGA GGCAGACAGA GAGTGCCTAC AGATACAGAG ATATTGTCGT CAGGAAGCAA 
GATGGCTTCA CCCACATCTT GTTATCCACA AAATCGTCAG AGAATAACTC ACTAAACCCA 
GAGGTGATGA AAGAAGTGCA GAGCGCCCTG AGCACAGCTG CAGCCGACGA CAGCAAGCTG 
GTTCTGCTCA GCGCCGTGGG CAGCGTCTTC TGCTGTGGTC TGGACTTTAT TTATTTTATT 
CGGCGCCTCA CAGATGACCG AAAGAGAGAA AGCACTAAAA TGGCAGACGC TATCAGAAAC 
TTCGTGAATA CTTTCATTCA GTTTAAGAAG CCTATTATTG TAGCTGTTAA TGGCCCAGCC 
ATTGGACTAG GAGCATCCAT ATTGCCTCTT TGTGATGTGG TTTGGGCTAA CGAAAAGGCT 
TGGTTTCAAA CACCCTATAC CACCTTCGGA CAGAGTCCAG ATGGCTGCTC TACCGTTATG 
TTTCCCAAGA TTATGGGAGG AGCATCTGCG AATGAAATGC TGTTCAGTGG GCGGAAGTTG 
ACGGCACAGG AGGCCTGTGG CAAGGGTCTG GTCTCCCAGG TGTTTTGGCC AGGAACCTTC 
ACACAGGAAG TCATGGTTCG AATCAAGGAG CTGGCTTCAT GTAACCCAGT TGTCCTGGAG 
GAATCCAAAG CCCTGGTGCG CTGCAATATG AAGATGGAGC TAGAGCAGGC CAATGAGAGA 
GAATGTGAAG TGCTGAAGAA GATCTGGGGC TCCGCCCAGG GCATGGACTC CATGTTAAAG 
TACTTACAGA GGAAAATCGA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Cdyl ( NM_001123386.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001116858.1 Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant 2, mRNA.

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CloneID	OMu21460
Clone ID Related Accession (Same CDS sequence)	NM_001123386.1
Accession Version	NM_001123386.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1635bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-26
Organism	Mus musculus(house mouse)
Product	chromodomain Y-like protein isoform 2
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC062123.1, AK028162.1 and BG229669.1. Transcript Variant: This variant (2) lacks several 5' exons but has an alternate 5' exon, as compared to variant 1. The resulting isoform (2) has a different and shorter N-terminus, as compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC062123.1, AK156509.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849381, SAMN00849383 [ECO:0000348] ##Evidence-Data-END##

ATGGCCTCCG AGGAGCTGTA CGAGGTGGAA AGTATCGTTG ACAAAAGGAA AAACAAGAAA 
GGGAAGACAG AATATCTGGT GCGGTGGAAA GGCTATGACA GTGAGGATGA CACGTGGGAG 
CCTGAGCAGC ACCTGGTGAA CTGTGAGGAA TACATCCATG ACTTCAACCG GCGCCACAAC 
GAGAGGCAAA AGGAAGGTAG CCTGGCTCGT GCCAGCAGAG CCTCCCCCAG CAACGCCCGG 
AAGCAGATTT CCAGGTCCAC CCACAGCACT CTCTCCAAGA CCAACTCCAA AGCACTTGTG 
GTAGGCAAAG ATCATGAGTC CAAAAGCAGC CAGCTGTTGG CTGCCAGCCA GAAGTTCAGG 
AAAAACCCAG CCCCATCTCT TGCAAACCGC AAGAACATGG ACCTCGCCAA GTCAGGGATC 
AAAATTCTCG TGCCTAAGAG CCCCGTTAAG GGCAGGACCT CGGTTGATGG CTTTCAGGGG 
GAGAGCCCCG AGAAGCTGGA CCCTGTGGAT CAGGGTGCCG AGGACACTGT AGCCCCAGAG 
GTGACTGCAG AGAAGCCCAC TGGGGCTTTG CTGGGCCCTG GTGCGGAGCG AGCCAGGATG 
GGGAGCAGGC CCCGAATACA TCCACTAGTG CCTCAGGTTT CTGGCCCCGT GACTGCTGCC 
ATGGCCACAG GCTTAGCTGT TAATGGAAAA GGTACATCTC CATTCATGGA TGCGCTAGCA 
GCCAACGGAA CAGTCACCAT ACAGACATCC GTAACAGGAG TGACAGCCGG GAAAAGGAAA 
TTTATTGACG ACAGAAGAGA CCAACCTTTT GACAAGCGGT TGCGTTTCAG TGTGAGGCAG 
ACAGAGAGTG CCTACAGATA CAGAGATATT GTCGTCAGGA AGCAAGATGG CTTCACCCAC 
ATCTTGTTAT CCACAAAATC GTCAGAGAAT AACTCACTAA ACCCAGAGGT GATGAAAGAA 
GTGCAGAGCG CCCTGAGCAC AGCTGCAGCC GACGACAGCA AGCTGGTTCT GCTCAGCGCC 
GTGGGCAGCG TCTTCTGCTG TGGTCTGGAC TTTATTTATT TTATTCGGCG CCTCACAGAT 
GACCGAAAGA GAGAAAGCAC TAAAATGGCA GACGCTATCA GAAACTTCGT GAATACTTTC 
ATTCAGTTTA AGAAGCCTAT TATTGTAGCT GTTAATGGCC CAGCCATTGG ACTAGGAGCA 
TCCATATTGC CTCTTTGTGA TGTGGTTTGG GCTAACGAAA AGGCTTGGTT TCAAACACCC 
TATACCACCT TCGGACAGAG TCCAGATGGC TGCTCTACCG TTATGTTTCC CAAGATTATG 
GGAGGAGCAT CTGCGAATGA AATGCTGTTC AGTGGGCGGA AGTTGACGGC ACAGGAGGCC 
TGTGGCAAGG GTCTGGTCTC CCAGGTGTTT TGGCCAGGAA CCTTCACACA GGAAGTCATG 
GTTCGAATCA AGGAGCTGGC TTCATGTAAC CCAGTTGTCC TGGAGGAATC CAAAGCCCTG 
GTGCGCTGCA ATATGAAGAT GGAGCTAGAG CAGGCCAATG AGAGAGAATG TGAAGTGCTG 
AAGAAGATCT GGGGCTCCGC CCAGGGCATG GACTCCATGT TAAAGTACTT ACAGAGGAAA 
ATCGATGAGT TCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001116858.1
CDS	464..2098
Translation	MASEELYEVESIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHNERQKEGSLARASRASPSNARKQISRSTHSTLSKTNSKALVVGKDHESKSSQLLAASQKFRKNPAPSLANRKNMDLAKSGIKILVPKSPVKGRTSVDGFQGESPEKLDPVDQGAEDTVAPEVTAEKPTGALLGPGAERARMGSRPRIHPLVPQVSGPVTAAMATGLAVNGKGTSPFMDALAANGTVTIQTSVTGVTAGKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMADAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLFSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF

Target ORF information:

RefSeq Version	NM_001123386.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001123386.1

ORF Insert Sequence:

ATGGCCTCCG AGGAGCTGTA CGAGGTGGAA AGTATCGTTG ACAAAAGGAA AAACAAGAAA 
GGGAAGACAG AATATCTGGT GCGGTGGAAA GGCTATGACA GTGAGGATGA CACGTGGGAG 
CCTGAGCAGC ACCTGGTGAA CTGTGAGGAA TACATCCATG ACTTCAACCG GCGCCACAAC 
GAGAGGCAAA AGGAAGGTAG CCTGGCTCGT GCCAGCAGAG CCTCCCCCAG CAACGCCCGG 
AAGCAGATTT CCAGGTCCAC CCACAGCACT CTCTCCAAGA CCAACTCCAA AGCACTTGTG 
GTAGGCAAAG ATCATGAGTC CAAAAGCAGC CAGCTGTTGG CTGCCAGCCA GAAGTTCAGG 
AAAAACCCAG CCCCATCTCT TGCAAACCGC AAGAACATGG ACCTCGCCAA GTCAGGGATC 
AAAATTCTCG TGCCTAAGAG CCCCGTTAAG GGCAGGACCT CGGTTGATGG CTTTCAGGGG 
GAGAGCCCCG AGAAGCTGGA CCCTGTGGAT CAGGGTGCCG AGGACACTGT AGCCCCAGAG 
GTGACTGCAG AGAAGCCCAC TGGGGCTTTG CTGGGCCCTG GTGCGGAGCG AGCCAGGATG 
GGGAGCAGGC CCCGAATACA TCCACTAGTG CCTCAGGTTT CTGGCCCCGT GACTGCTGCC 
ATGGCCACAG GCTTAGCTGT TAATGGAAAA GGTACATCTC CATTCATGGA TGCGCTAGCA 
GCCAACGGAA CAGTCACCAT ACAGACATCC GTAACAGGAG TGACAGCCGG GAAAAGGAAA 
TTTATTGACG ACAGAAGAGA CCAACCTTTT GACAAGCGGT TGCGTTTCAG TGTGAGGCAG 
ACAGAGAGTG CCTACAGATA CAGAGATATT GTCGTCAGGA AGCAAGATGG CTTCACCCAC 
ATCTTGTTAT CCACAAAATC GTCAGAGAAT AACTCACTAA ACCCAGAGGT GATGAAAGAA 
GTGCAGAGCG CCCTGAGCAC AGCTGCAGCC GACGACAGCA AGCTGGTTCT GCTCAGCGCC 
GTGGGCAGCG TCTTCTGCTG TGGTCTGGAC TTTATTTATT TTATTCGGCG CCTCACAGAT 
GACCGAAAGA GAGAAAGCAC TAAAATGGCA GACGCTATCA GAAACTTCGT GAATACTTTC 
ATTCAGTTTA AGAAGCCTAT TATTGTAGCT GTTAATGGCC CAGCCATTGG ACTAGGAGCA 
TCCATATTGC CTCTTTGTGA TGTGGTTTGG GCTAACGAAA AGGCTTGGTT TCAAACACCC 
TATACCACCT TCGGACAGAG TCCAGATGGC TGCTCTACCG TTATGTTTCC CAAGATTATG 
GGAGGAGCAT CTGCGAATGA AATGCTGTTC AGTGGGCGGA AGTTGACGGC ACAGGAGGCC 
TGTGGCAAGG GTCTGGTCTC CCAGGTGTTT TGGCCAGGAA CCTTCACACA GGAAGTCATG 
GTTCGAATCA AGGAGCTGGC TTCATGTAAC CCAGTTGTCC TGGAGGAATC CAAAGCCCTG 
GTGCGCTGCA ATATGAAGAT GGAGCTAGAG CAGGCCAATG AGAGAGAATG TGAAGTGCTG 
AAGAAGATCT GGGGCTCCGC CCAGGGCATG GACTCCATGT TAAAGTACTT ACAGAGGAAA 
ATCGATGAGT TCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Cdyl ( XM_006516536.3 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006516599.1 Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X1, mRNA.

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CloneID	OMu48315
Clone ID Related Accession (Same CDS sequence)	XM_006516536.3 , XM_006516536.2
Accession Version	XM_006516536.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1710bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	chromodomain Y-like protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000079.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006516536.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCTCCG AGGAGCTGTA CGAGCAAAAT AATGTGGTTC CTGCAACAGT CTCAGAACCC 
GATCAAGCGT CCCCTGCAAT TCAAGACGCG GAGACTCAGG TGGAAAGTAT CGTTGACAAA 
AGGAAAAACA AGAAAGGGAA GACAGAATAT CTGGTGCGGT GGAAAGGCTA TGACAGTGAG 
GATGACACGT GGGAGCCTGA GCAGCACCTG GTGAACTGTG AGGAATACAT CCATGACTTC 
AACCGGCGCC ACAACGAGAG GCAAAAGGAA GGTAGCCTGG CTCGTGCCAG CAGAGCCTCC 
CCCAGCAACG CCCGGAAGCA GATTTCCAGG TCCACCCACA GCACTCTCTC CAAGACCAAC 
TCCAAAGCAC TTGTGGTAGG CAAAGATCAT GAGTCCAAAA GCAGCCAGCT GTTGGCTGCC 
AGCCAGAAGT TCAGGAAAAA CCCAGCCCCA TCTCTTGCAA ACCGCAAGAA CATGGACCTC 
GCCAAGTCAG GGATCAAAAT TCTCGTGCCT AAGAGCCCCG TTAAGGGCAG GACCTCGGTT 
GATGGCTTTC AGGGGGAGAG CCCCGAGAAG CTGGACCCTG TGGATCAGGG TGCCGAGGAC 
ACTGTAGCCC CAGAGGTGAC TGCAGAGAAG CCCACTGGGG CTTTGCTGGG CCCTGGTGCG 
GAGCGAGCCA GGATGGGGAG CAGGCCCCGA ATACATCCAC TAGTGCCTCA GGTTTCTGGC 
CCCGTGACTG CTGCCATGGC CACAGGCTTA GCTGTTAATG GAAAAGGTAC ATCTCCATTC 
ATGGATGCGC TAGCAGCCAA CGGAACAGTC ACCATACAGA CATCCGTAAC AGGAGTGACA 
GCCGGGAAAA GGAAATTTAT TGACGACAGA AGAGACCAAC CTTTTGACAA GCGGTTGCGT 
TTCAGTGTGA GGCAGACAGA GAGTGCCTAC AGATACAGAG ATATTGTCGT CAGGAAGCAA 
GATGGCTTCA CCCACATCTT GTTATCCACA AAATCGTCAG AGAATAACTC ACTAAACCCA 
GAGGTGATGA AAGAAGTGCA GAGCGCCCTG AGCACAGCTG CAGCCGACGA CAGCAAGCTG 
GTTCTGCTCA GCGCCGTGGG CAGCGTCTTC TGCTGTGGTC TGGACTTTAT TTATTTTATT 
CGGCGCCTCA CAGATGACCG AAAGAGAGAA AGCACTAAAA TGGCAGACGC TATCAGAAAC 
TTCGTGAATA CTTTCATTCA GTTTAAGAAG CCTATTATTG TAGCTGTTAA TGGCCCAGCC 
ATTGGACTAG GAGCATCCAT ATTGCCTCTT TGTGATGTGG TTTGGGCTAA CGAAAAGGCT 
TGGTTTCAAA CACCCTATAC CACCTTCGGA CAGAGTCCAG ATGGCTGCTC TACCGTTATG 
TTTCCCAAGA TTATGGGAGG AGCATCTGCG AATGAAATGC TGTTCAGTGG GCGGAAGTTG 
ACGGCACAGG AGGCCTGTGG CAAGGGTCTG GTCTCCCAGG TGTTTTGGCC AGGAACCTTC 
ACACAGGAAG TCATGGTTCG AATCAAGGAG CTGGCTTCAT GTAACCCAGT TGTCCTGGAG 
GAATCCAAAG CCCTGGTGCG CTGCAATATG AAGATGGAGC TAGAGCAGGC CAATGAGAGA 
GAATGTGAAG TGCTGAAGAA GATCTGGGGC TCCGCCCAGG GCATGGACTC CATGTTAAAG 
TACTTACAGA GGAAAATCGA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006516599.1
CDS	580..2289
Translation	MASEELYEQNNVVPATVSEPDQASPAIQDAETQVESIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHNERQKEGSLARASRASPSNARKQISRSTHSTLSKTNSKALVVGKDHESKSSQLLAASQKFRKNPAPSLANRKNMDLAKSGIKILVPKSPVKGRTSVDGFQGESPEKLDPVDQGAEDTVAPEVTAEKPTGALLGPGAERARMGSRPRIHPLVPQVSGPVTAAMATGLAVNGKGTSPFMDALAANGTVTIQTSVTGVTAGKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMADAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLFSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF

Target ORF information:

RefSeq Version	XM_006516536.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006516536.3

ORF Insert Sequence:

ATGGCCTCCG AGGAGCTGTA CGAGCAAAAT AATGTGGTTC CTGCAACAGT CTCAGAACCC 
GATCAAGCGT CCCCTGCAAT TCAAGACGCG GAGACTCAGG TGGAAAGTAT CGTTGACAAA 
AGGAAAAACA AGAAAGGGAA GACAGAATAT CTGGTGCGGT GGAAAGGCTA TGACAGTGAG 
GATGACACGT GGGAGCCTGA GCAGCACCTG GTGAACTGTG AGGAATACAT CCATGACTTC 
AACCGGCGCC ACAACGAGAG GCAAAAGGAA GGTAGCCTGG CTCGTGCCAG CAGAGCCTCC 
CCCAGCAACG CCCGGAAGCA GATTTCCAGG TCCACCCACA GCACTCTCTC CAAGACCAAC 
TCCAAAGCAC TTGTGGTAGG CAAAGATCAT GAGTCCAAAA GCAGCCAGCT GTTGGCTGCC 
AGCCAGAAGT TCAGGAAAAA CCCAGCCCCA TCTCTTGCAA ACCGCAAGAA CATGGACCTC 
GCCAAGTCAG GGATCAAAAT TCTCGTGCCT AAGAGCCCCG TTAAGGGCAG GACCTCGGTT 
GATGGCTTTC AGGGGGAGAG CCCCGAGAAG CTGGACCCTG TGGATCAGGG TGCCGAGGAC 
ACTGTAGCCC CAGAGGTGAC TGCAGAGAAG CCCACTGGGG CTTTGCTGGG CCCTGGTGCG 
GAGCGAGCCA GGATGGGGAG CAGGCCCCGA ATACATCCAC TAGTGCCTCA GGTTTCTGGC 
CCCGTGACTG CTGCCATGGC CACAGGCTTA GCTGTTAATG GAAAAGGTAC ATCTCCATTC 
ATGGATGCGC TAGCAGCCAA CGGAACAGTC ACCATACAGA CATCCGTAAC AGGAGTGACA 
GCCGGGAAAA GGAAATTTAT TGACGACAGA AGAGACCAAC CTTTTGACAA GCGGTTGCGT 
TTCAGTGTGA GGCAGACAGA GAGTGCCTAC AGATACAGAG ATATTGTCGT CAGGAAGCAA 
GATGGCTTCA CCCACATCTT GTTATCCACA AAATCGTCAG AGAATAACTC ACTAAACCCA 
GAGGTGATGA AAGAAGTGCA GAGCGCCCTG AGCACAGCTG CAGCCGACGA CAGCAAGCTG 
GTTCTGCTCA GCGCCGTGGG CAGCGTCTTC TGCTGTGGTC TGGACTTTAT TTATTTTATT 
CGGCGCCTCA CAGATGACCG AAAGAGAGAA AGCACTAAAA TGGCAGACGC TATCAGAAAC 
TTCGTGAATA CTTTCATTCA GTTTAAGAAG CCTATTATTG TAGCTGTTAA TGGCCCAGCC 
ATTGGACTAG GAGCATCCAT ATTGCCTCTT TGTGATGTGG TTTGGGCTAA CGAAAAGGCT 
TGGTTTCAAA CACCCTATAC CACCTTCGGA CAGAGTCCAG ATGGCTGCTC TACCGTTATG 
TTTCCCAAGA TTATGGGAGG AGCATCTGCG AATGAAATGC TGTTCAGTGG GCGGAAGTTG 
ACGGCACAGG AGGCCTGTGG CAAGGGTCTG GTCTCCCAGG TGTTTTGGCC AGGAACCTTC 
ACACAGGAAG TCATGGTTCG AATCAAGGAG CTGGCTTCAT GTAACCCAGT TGTCCTGGAG 
GAATCCAAAG CCCTGGTGCG CTGCAATATG AAGATGGAGC TAGAGCAGGC CAATGAGAGA 
GAATGTGAAG TGCTGAAGAA GATCTGGGGC TCCGCCCAGG GCATGGACTC CATGTTAAAG 
TACTTACAGA GGAAAATCGA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromodomain Protein CDYL Acts as a Crotonyl-CoA Hydratase to Regulate Histone Crotonylation and Spermatogenesis.
Molecular cell67(5)853-866.e5(2017 Sep)
Liu S,Yu H,Liu Y,Liu X,Zhang Y,Bu C,Yuan S,Chen Z,Xie G,Li W,Xu B,Yang J,He L,Jin T,Xiong Y,Sun L,Liu X,Han C,Cheng Z,Liang J,Shang Y

PRDM9 interactions with other proteins provide a link between recombination hotspots and the chromosomal axis in meiosis.
Molecular biology of the cell28(3)488-499(2017 Feb)
Parvanov ED,Tian H,Billings T,Saxl RL,Spruce C,Aithal R,Krejci L,Paigen K,Petkov PM

CDYL Deficiency Disrupts Neuronal Migration and Increases Susceptibility to Epilepsy.
Cell reports18(2)380-390(2017 01)
Qin R,Cao S,Lyu T,Qi C,Zhang W,Wang Y

Cdyl, a new partner of the inactive X chromosome and potential reader of H3K27me3 and H3K9me2.
Molecular and cellular biology33(24)5005-20(2013 Dec)
Escamilla-Del-Arenal M,da Rocha ST,Spruijt CG,Masui O,Renaud O,Smits AH,Margueron R,Vermeulen M,Heard E

Olig2 targets chromatin remodelers to enhancers to initiate oligodendrocyte differentiation.
Cell152(1-2)248-61(2013 Jan)
Yu Y,Chen Y,Kim B,Wang H,Zhao C,He X,Liu L,Liu W,Wu LM,Mao M,Chan JR,Wu J,Lu QR

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Cdyl cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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