Cd44 cDNA ORF clone, Mus musculus(house mouse)

  • Gene

  • Clones

  • gRNAs

The following Cd44 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cd44 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu29961 XM_006498649.2
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant X5, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $307.30
$439.00
OMu22618 NM_001177787.1
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant 6, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $223.30
$319.00
OMu22861 NM_001039150.1
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $307.30
$439.00
OMu22898 NM_001177786.1
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant 5, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $223.30
$319.00
OMu29960 XM_006498648.2
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $307.30
$439.00
OMu23030 NM_001039151.1
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant 3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $223.30
$319.00
OMu29957 XM_006498645.2
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $391.30
$559.00
OMu29958 XM_006498646.2
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $391.30
$559.00
OMu29959 XM_006498647.2
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $391.30
$559.00
OMu22812 NM_009851.2
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $391.30
$559.00
OMu22844 NM_001177785.1
Latest version!
Mus musculus CD44 antigen (Cd44), transcript variant 4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $384.30
$549.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OMu29961
    Clone ID Related Accession (Same CDS sequence) XM_006498649.2
    Accession Version XM_006498649.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1623bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-08-07
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform X5
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006498649.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC ACTAAGAGCG GCGCTAAAGA TGCAAGAAGA
    GGTGGAAGTC TTCCCACAGA TACAACTACT TCTGTAGAAG GCTACACCTT TCAATACCCA
    GACACAATGG AAAATGGGAC TCTCTTCCCA GTGACCCCTG CTAAAACTGA GGTCTTTGGA
    GAAACTGAAG TGACTCTTGC TACTGACTCC AACGTTAATG TTGATGGCTC CTTACCAGGA
    GATCGAGACT CATCCAAGGA CTCCAGGGGG AGTTCCCGCA CTGTGACTCA TGGATCCGAA
    TTAGCTGGAC ACTCAAGTGC GAACCAGGAC AGTGGAGTGA CCACAACTTC TGGTCCTATG
    AGGAGACCTC AGATTCCAGA ATGGCTCATC ATCTTGGCAT CTCTCCTGGC ACTGGCTCTG
    ATTCTTGCCG TCTGCATCGC GGTCAATAGT AGGAGAAGGT GTGGGCAGAA GAAAAAGCTG
    GTGATCAACG GTGGCAATGG GACGGTGGAA GACAGGAAAC CCAGTGAGCT CAACGGGGAG
    GCCAGCAAGT CTCAGGAAAT GGTGCATTTG GTGAACAAGG AACCATCAGA GACCCCGGAC
    CAGTGTATGA CAGCTGACGA GACCCGGAAT CTGCAGAGTG TGGACATGAA GATTGGGGTG
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006498712.1
    CDS324..1946
    Translation

    Target ORF information:

    RefSeq Version XM_006498649.2
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant X5, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006498649.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC ACTAAGAGCG GCGCTAAAGA TGCAAGAAGA
    GGTGGAAGTC TTCCCACAGA TACAACTACT TCTGTAGAAG GCTACACCTT TCAATACCCA
    GACACAATGG AAAATGGGAC TCTCTTCCCA GTGACCCCTG CTAAAACTGA GGTCTTTGGA
    GAAACTGAAG TGACTCTTGC TACTGACTCC AACGTTAATG TTGATGGCTC CTTACCAGGA
    GATCGAGACT CATCCAAGGA CTCCAGGGGG AGTTCCCGCA CTGTGACTCA TGGATCCGAA
    TTAGCTGGAC ACTCAAGTGC GAACCAGGAC AGTGGAGTGA CCACAACTTC TGGTCCTATG
    AGGAGACCTC AGATTCCAGA ATGGCTCATC ATCTTGGCAT CTCTCCTGGC ACTGGCTCTG
    ATTCTTGCCG TCTGCATCGC GGTCAATAGT AGGAGAAGGT GTGGGCAGAA GAAAAAGCTG
    GTGATCAACG GTGGCAATGG GACGGTGGAA GACAGGAAAC CCAGTGAGCT CAACGGGGAG
    GCCAGCAAGT CTCAGGAAAT GGTGCATTTG GTGAACAAGG AACCATCAGA GACCCCGGAC
    CAGTGTATGA CAGCTGACGA GACCCGGAAT CTGCAGAGTG TGGACATGAA GATTGGGGTG
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu22618
    Clone ID Related Accession (Same CDS sequence) NM_001177787.1
    Accession Version NM_001177787.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1395bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2020-01-04
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform f precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL844155.6, AK045226.1 and AJ251594.1. Transcript Variant: This variant (5) lacks several alternate, in-frame, exons, compared to variant 1. The resulting protein (isoform f) is shorter when it is compared to isoform a. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: X66081.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACACAGAG TCATTCTCAG AACTTCTCTA CATTACATGG AGAGCCGGAA
    GAAGACGAAA ACCATCCAAC AACTTCTATT CTGCCATCTA GCACTAAGAG CGGCGCTAAA
    GATGCAAGAA GAGGTGGAAG TCTTCCCACA GATACAACTA CTTCTGTAGA AGGCTACACC
    TTTCAATACC CAGACACAAT GGAAAATGGG ACTCTCTTCC CAGTGACCCC TGCTAAAACT
    GAGGTCTTTG GAGAAACTGA AGTGACTCTT GCTACTGACT CCAACGTTAA TGTTGATGGC
    TCCTTACCAG GAGATCGAGA CTCATCCAAG GACTCCAGGG GGAGTTCCCG CACTGTGACT
    CATGGATCCG AATTAGCTGG ACACTCAAGT GCGAACCAGG ACAGTGGAGT GACCACAACT
    TCTGGTCCTA TGAGGAGACC TCAGATTCCA GAATGGCTCA TCATCTTGGC ATCTCTCCTG
    GCACTGGCTC TGATTCTTGC CGTCTGCATC GCGGTCAATA GTAGGAGAAG GTGTGGGCAG
    AAGAAAAAGC TGGTGATCAA CGGTGGCAAT GGGACGGTGG AAGACAGGAA ACCCAGTGAG
    CTCAACGGGG AGGCCAGCAA GTCTCAGGAA ATGGTGCATT TGGTGAACAA GGAACCATCA
    GAGACCCCGG ACCAGTGTAT GACAGCTGAC GAGACCCGGA ATCTGCAGAG TGTGGACATG
    AAGATTGGGG TGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001171258.1
    CDS320..1714
    Translation

    Target ORF information:

    RefSeq Version NM_001177787.1
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant 6, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001177787.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACACAGAG TCATTCTCAG AACTTCTCTA CATTACATGG AGAGCCGGAA
    GAAGACGAAA ACCATCCAAC AACTTCTATT CTGCCATCTA GCACTAAGAG CGGCGCTAAA
    GATGCAAGAA GAGGTGGAAG TCTTCCCACA GATACAACTA CTTCTGTAGA AGGCTACACC
    TTTCAATACC CAGACACAAT GGAAAATGGG ACTCTCTTCC CAGTGACCCC TGCTAAAACT
    GAGGTCTTTG GAGAAACTGA AGTGACTCTT GCTACTGACT CCAACGTTAA TGTTGATGGC
    TCCTTACCAG GAGATCGAGA CTCATCCAAG GACTCCAGGG GGAGTTCCCG CACTGTGACT
    CATGGATCCG AATTAGCTGG ACACTCAAGT GCGAACCAGG ACAGTGGAGT GACCACAACT
    TCTGGTCCTA TGAGGAGACC TCAGATTCCA GAATGGCTCA TCATCTTGGC ATCTCTCCTG
    GCACTGGCTC TGATTCTTGC CGTCTGCATC GCGGTCAATA GTAGGAGAAG GTGTGGGCAG
    AAGAAAAAGC TGGTGATCAA CGGTGGCAAT GGGACGGTGG AAGACAGGAA ACCCAGTGAG
    CTCAACGGGG AGGCCAGCAA GTCTCAGGAA ATGGTGCATT TGGTGAACAA GGAACCATCA
    GAGACCCCGG ACCAGTGTAT GACAGCTGAC GAGACCCGGA ATCTGCAGAG TGTGGACATG
    AAGATTGGGG TGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu22861
    Clone ID Related Accession (Same CDS sequence) NM_001039150.1
    Accession Version NM_001039150.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1743bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2020-01-04
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform b precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL844155.6 and CT010324.1. Transcript Variant: This variant (2) lacks several alternate, in-frame, exons, compared to variant 1. The resulting protein (isoform b) is shorter when it is compared to isoform a. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC051388.1, X66083.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACTCCTAA TAGTACAGCA GAAGCAGCAG CTACCCAGCA GGAGACGTGG
    TTTCAGAACG GATGGCAGGG GAAGAACCCC CCTACCCCAA GTGAAGACTC CCATGTGACA
    GAAGGGACAA CTGCTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC ACTAAGAGCG GCGCTAAAGA TGCAAGAAGA
    GGTGGAAGTC TTCCCACAGA TACAACTACT TCTGTAGAAG GCTACACCTT TCAATACCCA
    GACACAATGG AAAATGGGAC TCTCTTCCCA GTGACCCCTG CTAAAACTGA GGTCTTTGGA
    GAAACTGAAG TGACTCTTGC TACTGACTCC AACGTTAATG TTGATGGCTC CTTACCAGGA
    GATCGAGACT CATCCAAGGA CTCCAGGGGG AGTTCCCGCA CTGTGACTCA TGGATCCGAA
    TTAGCTGGAC ACTCAAGTGC GAACCAGGAC AGTGGAGTGA CCACAACTTC TGGTCCTATG
    AGGAGACCTC AGATTCCAGA ATGGCTCATC ATCTTGGCAT CTCTCCTGGC ACTGGCTCTG
    ATTCTTGCCG TCTGCATCGC GGTCAATAGT AGGAGAAGGT GTGGGCAGAA GAAAAAGCTG
    GTGATCAACG GTGGCAATGG GACGGTGGAA GACAGGAAAC CCAGTGAGCT CAACGGGGAG
    GCCAGCAAGT CTCAGGAAAT GGTGCATTTG GTGAACAAGG AACCATCAGA GACCCCGGAC
    CAGTGTATGA CAGCTGACGA GACCCGGAAT CTGCAGAGTG TGGACATGAA GATTGGGGTG
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001034239.1
    CDS320..2062
    Translation

    Target ORF information:

    RefSeq Version NM_001039150.1
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001039150.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACTCCTAA TAGTACAGCA GAAGCAGCAG CTACCCAGCA GGAGACGTGG
    TTTCAGAACG GATGGCAGGG GAAGAACCCC CCTACCCCAA GTGAAGACTC CCATGTGACA
    GAAGGGACAA CTGCTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC ACTAAGAGCG GCGCTAAAGA TGCAAGAAGA
    GGTGGAAGTC TTCCCACAGA TACAACTACT TCTGTAGAAG GCTACACCTT TCAATACCCA
    GACACAATGG AAAATGGGAC TCTCTTCCCA GTGACCCCTG CTAAAACTGA GGTCTTTGGA
    GAAACTGAAG TGACTCTTGC TACTGACTCC AACGTTAATG TTGATGGCTC CTTACCAGGA
    GATCGAGACT CATCCAAGGA CTCCAGGGGG AGTTCCCGCA CTGTGACTCA TGGATCCGAA
    TTAGCTGGAC ACTCAAGTGC GAACCAGGAC AGTGGAGTGA CCACAACTTC TGGTCCTATG
    AGGAGACCTC AGATTCCAGA ATGGCTCATC ATCTTGGCAT CTCTCCTGGC ACTGGCTCTG
    ATTCTTGCCG TCTGCATCGC GGTCAATAGT AGGAGAAGGT GTGGGCAGAA GAAAAAGCTG
    GTGATCAACG GTGGCAATGG GACGGTGGAA GACAGGAAAC CCAGTGAGCT CAACGGGGAG
    GCCAGCAAGT CTCAGGAAAT GGTGCATTTG GTGAACAAGG AACCATCAGA GACCCCGGAC
    CAGTGTATGA CAGCTGACGA GACCCGGAAT CTGCAGAGTG TGGACATGAA GATTGGGGTG
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu22898
    Clone ID Related Accession (Same CDS sequence) NM_001177786.1
    Accession Version NM_001177786.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1497bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2020-01-04
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform e precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL844155.6, AK045226.1 and AJ251594.1. Transcript Variant: This variant (5) lacks several alternate, in-frame, exons, compared to variant 1. The resulting protein (isoform e) is shorter when it is compared to isoform a. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: X66082.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCAATACAGA CTCCAGTCAT AGTACAACCC TTCAGCCTAC TGCAGCTCCA
    AATACCCATT TGGTGGAAGA CTTGAACAGG ACAGGACCAC TTTCAGTGAC AACTCCACAG
    AGTCATTCTC AGAACTTCTC TACATTACAT GGAGAGCCGG AAGAAGACGA AAACCATCCA
    ACAACTTCTA TTCTGCCATC TAGCACTAAG AGCGGCGCTA AAGATGCAAG AAGAGGTGGA
    AGTCTTCCCA CAGATACAAC TACTTCTGTA GAAGGCTACA CCTTTCAATA CCCAGACACA
    ATGGAAAATG GGACTCTCTT CCCAGTGACC CCTGCTAAAA CTGAGGTCTT TGGAGAAACT
    GAAGTGACTC TTGCTACTGA CTCCAACGTT AATGTTGATG GCTCCTTACC AGGAGATCGA
    GACTCATCCA AGGACTCCAG GGGGAGTTCC CGCACTGTGA CTCATGGATC CGAATTAGCT
    GGACACTCAA GTGCGAACCA GGACAGTGGA GTGACCACAA CTTCTGGTCC TATGAGGAGA
    CCTCAGATTC CAGAATGGCT CATCATCTTG GCATCTCTCC TGGCACTGGC TCTGATTCTT
    GCCGTCTGCA TCGCGGTCAA TAGTAGGAGA AGGTGTGGGC AGAAGAAAAA GCTGGTGATC
    AACGGTGGCA ATGGGACGGT GGAAGACAGG AAACCCAGTG AGCTCAACGG GGAGGCCAGC
    AAGTCTCAGG AAATGGTGCA TTTGGTGAAC AAGGAACCAT CAGAGACCCC GGACCAGTGT
    ATGACAGCTG ACGAGACCCG GAATCTGCAG AGTGTGGACA TGAAGATTGG GGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001171257.1
    CDS320..1816
    Translation

    Target ORF information:

    RefSeq Version NM_001177786.1
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant 5, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001177786.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCAATACAGA CTCCAGTCAT AGTACAACCC TTCAGCCTAC TGCAGCTCCA
    AATACCCATT TGGTGGAAGA CTTGAACAGG ACAGGACCAC TTTCAGTGAC AACTCCACAG
    AGTCATTCTC AGAACTTCTC TACATTACAT GGAGAGCCGG AAGAAGACGA AAACCATCCA
    ACAACTTCTA TTCTGCCATC TAGCACTAAG AGCGGCGCTA AAGATGCAAG AAGAGGTGGA
    AGTCTTCCCA CAGATACAAC TACTTCTGTA GAAGGCTACA CCTTTCAATA CCCAGACACA
    ATGGAAAATG GGACTCTCTT CCCAGTGACC CCTGCTAAAA CTGAGGTCTT TGGAGAAACT
    GAAGTGACTC TTGCTACTGA CTCCAACGTT AATGTTGATG GCTCCTTACC AGGAGATCGA
    GACTCATCCA AGGACTCCAG GGGGAGTTCC CGCACTGTGA CTCATGGATC CGAATTAGCT
    GGACACTCAA GTGCGAACCA GGACAGTGGA GTGACCACAA CTTCTGGTCC TATGAGGAGA
    CCTCAGATTC CAGAATGGCT CATCATCTTG GCATCTCTCC TGGCACTGGC TCTGATTCTT
    GCCGTCTGCA TCGCGGTCAA TAGTAGGAGA AGGTGTGGGC AGAAGAAAAA GCTGGTGATC
    AACGGTGGCA ATGGGACGGT GGAAGACAGG AAACCCAGTG AGCTCAACGG GGAGGCCAGC
    AAGTCTCAGG AAATGGTGCA TTTGGTGAAC AAGGAACCAT CAGAGACCCC GGACCAGTGT
    ATGACAGCTG ACGAGACCCG GAATCTGCAG AGTGTGGACA TGAAGATTGG GGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu29960
    Clone ID Related Accession (Same CDS sequence) XM_006498648.2
    Accession Version XM_006498648.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1734bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-08-07
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform X4
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006498648.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCCTC AACTGTGCAC TCAAAAAGCC ATGCAGCAGC TCAGAAACAA
    AATAATTGGA TATGGTCTTG GTTTGGTAAT TCACAGTCCA CAACTCAGAC TCAGGAGCCC
    ACAACGAGTG CAACTACAGC CTTGATGACC ACCCCTGAAA CACCACCCAA GAGGCAAGAA
    GCCCAGAACT GGTTTTCATG GTTATTTCAA CCATCAGAGT CCAAGAGTCA TCTTCATACA
    ACAACGAAGA TGCCTGGTAC GGAGTCAAAT ACCAACCCAA CAGGCTGGGA GCCAAATGAG
    GAAAATGAAG ATGAAACAGA CAAATACCCC AGTTTTTCTG GATCAGGCAT TGATGATGAT
    GAAGATTTTA TCTCCAGTAC CATTGCAAGT ACTCCACGGG TTTCTGCCCG CACAGAAGAC
    AACCAGGACT GGACCCAGTG GAAGCCAAAC CATTCAAACC CAGAAGTACT ACTCCAGACA
    ACCACCAGGA TGGCTGATAT AGACAGAATC AGCACCAGTG CTCATGGAGA AAATTGGACC
    CCGGAACCAC AGCCTCCTTT CAATAACCAT GAGTATCAGG ATGAAGAGGA GACCCCACAT
    GCTACAAGCA CAACTCCTAA TAGTACAGCA GAAGCAGCAG CTACCCAGCA GGAGACGTGG
    TTTCAGAACG GATGGCAGGG GAAGAACCCC CCTACCCCAA GTGAAGACTC CCATGTGACA
    GAAGGGACAA CTGCTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC AGTGTGTCTG GTGGTGGTTG CTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006498711.1
    CDS324..2057
    Translation

    Target ORF information:

    RefSeq Version XM_006498648.2
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant X4, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006498648.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCCTC AACTGTGCAC TCAAAAAGCC ATGCAGCAGC TCAGAAACAA
    AATAATTGGA TATGGTCTTG GTTTGGTAAT TCACAGTCCA CAACTCAGAC TCAGGAGCCC
    ACAACGAGTG CAACTACAGC CTTGATGACC ACCCCTGAAA CACCACCCAA GAGGCAAGAA
    GCCCAGAACT GGTTTTCATG GTTATTTCAA CCATCAGAGT CCAAGAGTCA TCTTCATACA
    ACAACGAAGA TGCCTGGTAC GGAGTCAAAT ACCAACCCAA CAGGCTGGGA GCCAAATGAG
    GAAAATGAAG ATGAAACAGA CAAATACCCC AGTTTTTCTG GATCAGGCAT TGATGATGAT
    GAAGATTTTA TCTCCAGTAC CATTGCAAGT ACTCCACGGG TTTCTGCCCG CACAGAAGAC
    AACCAGGACT GGACCCAGTG GAAGCCAAAC CATTCAAACC CAGAAGTACT ACTCCAGACA
    ACCACCAGGA TGGCTGATAT AGACAGAATC AGCACCAGTG CTCATGGAGA AAATTGGACC
    CCGGAACCAC AGCCTCCTTT CAATAACCAT GAGTATCAGG ATGAAGAGGA GACCCCACAT
    GCTACAAGCA CAACTCCTAA TAGTACAGCA GAAGCAGCAG CTACCCAGCA GGAGACGTGG
    TTTCAGAACG GATGGCAGGG GAAGAACCCC CCTACCCCAA GTGAAGACTC CCATGTGACA
    GAAGGGACAA CTGCTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC AGTGTGTCTG GTGGTGGTTG CTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu23030
    Clone ID Related Accession (Same CDS sequence) NM_001039151.1
    Accession Version NM_001039151.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1098bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2020-01-04
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform c precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL844155.6 and AK045226.1. Transcript Variant: This variant (3) lacks several alternate, in-frame, exons, compared to variant 1. The resulting protein (isoform c) is shorter when it is compared to isoform a. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK166320.1, AK144125.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCAGAGATCG AGACTCATCC AAGGACTCCA GGGGGAGTTC CCGCACTGTG
    ACTCATGGAT CCGAATTAGC TGGACACTCA AGTGCGAACC AGGACAGTGG AGTGACCACA
    ACTTCTGGTC CTATGAGGAG ACCTCAGATT CCAGAATGGC TCATCATCTT GGCATCTCTC
    CTGGCACTGG CTCTGATTCT TGCCGTCTGC ATCGCGGTCA ATAGTAGGAG AAGGTGTGGG
    CAGAAGAAAA AGCTGGTGAT CAACGGTGGC AATGGGACGG TGGAAGACAG GAAACCCAGT
    GAGCTCAACG GGGAGGCCAG CAAGTCTCAG GAAATGGTGC ATTTGGTGAA CAAGGAACCA
    TCAGAGACCC CGGACCAGTG TATGACAGCT GACGAGACCC GGAATCTGCA GAGTGTGGAC
    ATGAAGATTG GGGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001034240.1
    CDS320..1417
    Translation

    Target ORF information:

    RefSeq Version NM_001039151.1
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant 3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001039151.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCAGAGATCG AGACTCATCC AAGGACTCCA GGGGGAGTTC CCGCACTGTG
    ACTCATGGAT CCGAATTAGC TGGACACTCA AGTGCGAACC AGGACAGTGG AGTGACCACA
    ACTTCTGGTC CTATGAGGAG ACCTCAGATT CCAGAATGGC TCATCATCTT GGCATCTCTC
    CTGGCACTGG CTCTGATTCT TGCCGTCTGC ATCGCGGTCA ATAGTAGGAG AAGGTGTGGG
    CAGAAGAAAA AGCTGGTGAT CAACGGTGGC AATGGGACGG TGGAAGACAG GAAACCCAGT
    GAGCTCAACG GGGAGGCCAG CAAGTCTCAG GAAATGGTGC ATTTGGTGAA CAAGGAACCA
    TCAGAGACCC CGGACCAGTG TATGACAGCT GACGAGACCC GGAATCTGCA GAGTGTGGAC
    ATGAAGATTG GGGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu29957
    Clone ID Related Accession (Same CDS sequence) XM_006498645.2
    Accession Version XM_006498645.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2217bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-08-07
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006498645.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACCTTGAT GACCACCCCT GAAACACCAC CCAAGAGGCA AGAAGCCCAG
    AACTGGTTTT CATGGTTATT TCAACCATCA GAGTCCAAGA GTCATCTTCA TACAACAACG
    AAGATGCCTG GTACGGAGTC AAATACCAAC CCAACAGGCT GGGAGCCAAA TGAGGAAAAT
    GAAGATGAAA CAGACAAATA CCCCAGTTTT TCTGGATCAG GCATTGATGA TGATGAAGAT
    TTTATCTCCA GTACCATTGC AAGTACTCCA CGGGTTTCTG CCCGCACAGA AGACAACCAG
    GACTGGACCC AGTGGAAGCC AAACCATTCA AACCCAGAAG TACTACTCCA GACAACCACC
    AGGATGGCTG ATATAGACAG AATCAGCACC AGTGCTCATG GAGAAAATTG GACCCCGGAA
    CCACAGCCTC CTTTCAATAA CCATGAGTAT CAGGATGAAG AGGAGACCCC ACATGCTACA
    AGCACAACTC CTAATAGTAC AGCAGAAGCA GCAGCTACCC AGCAGGAGAC GTGGTTTCAG
    AACGGATGGC AGGGGAAGAA CCCCCCTACC CCAAGTGAAG ACTCCCATGT GACAGAAGGG
    ACAACTGCTT CGGCCCACAA CAACCATCCA AGTCAAAGAA TAACAACACA GAGTCAAGAG
    GATGTTTCCT GGACAGATTT CTTCGACCCA ATCTCACATC CAATGGGACA AGGTCATCAA
    ACAGAAAGCA AGGATACAGA CTCCAGTCAT AGTACAACCC TTCAGCCTAC TGCAGCTCCA
    AATACCCATT TGGTGGAAGA CTTGAACAGG ACAGGACCAC TTTCAGTGAC AACTCCACAG
    AGTCATTCTC AGAACTTCTC TACATTACAT GGAGAGCCGG AAGAAGACGA AAACCATCCA
    ACAACTTCTA TTCTGCCATC TAGCACTAAG AGCGGCGCTA AAGATGCAAG AAGAGGTGGA
    AGTCTTCCCA CAGATACAAC TACTTCTGTA GAAGGCTACA CCTTTCAATA CCCAGACACA
    ATGGAAAATG GGACTCTCTT CCCAGTGACC CCTGCTAAAA CTGAGGTCTT TGGAGAAACT
    GAAGTGACTC TTGCTACTGA CTCCAACGTT AATGTTGATG GCTCCTTACC AGGAGATCGA
    GACTCATCCA AGGACTCCAG GGGGAGTTCC CGCACTGTGA CTCATGGATC CGAATTAGCT
    GGACACTCAA GTGCGAACCA GGACAGTGGA GTGACCACAA CTTCTGGTCC TATGAGGAGA
    CCTCAGATTC CAGAATGGCT CATCATCTTG GCATCTCTCC TGGCACTGGC TCTGATTCTT
    GCCGTCTGCA TCGCGGTCAA TAGTAGGAGA AGGTGTGGGC AGAAGAAAAA GCTGGTGATC
    AACGGTGGCA ATGGGACGGT GGAAGACAGG AAACCCAGTG AGCTCAACGG GGAGGCCAGC
    AAGTCTCAGG AAATGGTGCA TTTGGTGAAC AAGGAACCAT CAGAGACCCC GGACCAGTGT
    ATGACAGCTG ACGAGACCCG GAATCTGCAG AGTGTGGACA TGAAGATTGG GGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006498708.1
    CDS324..2540
    Translation

    Target ORF information:

    RefSeq Version XM_006498645.2
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006498645.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCACCTTGAT GACCACCCCT GAAACACCAC CCAAGAGGCA AGAAGCCCAG
    AACTGGTTTT CATGGTTATT TCAACCATCA GAGTCCAAGA GTCATCTTCA TACAACAACG
    AAGATGCCTG GTACGGAGTC AAATACCAAC CCAACAGGCT GGGAGCCAAA TGAGGAAAAT
    GAAGATGAAA CAGACAAATA CCCCAGTTTT TCTGGATCAG GCATTGATGA TGATGAAGAT
    TTTATCTCCA GTACCATTGC AAGTACTCCA CGGGTTTCTG CCCGCACAGA AGACAACCAG
    GACTGGACCC AGTGGAAGCC AAACCATTCA AACCCAGAAG TACTACTCCA GACAACCACC
    AGGATGGCTG ATATAGACAG AATCAGCACC AGTGCTCATG GAGAAAATTG GACCCCGGAA
    CCACAGCCTC CTTTCAATAA CCATGAGTAT CAGGATGAAG AGGAGACCCC ACATGCTACA
    AGCACAACTC CTAATAGTAC AGCAGAAGCA GCAGCTACCC AGCAGGAGAC GTGGTTTCAG
    AACGGATGGC AGGGGAAGAA CCCCCCTACC CCAAGTGAAG ACTCCCATGT GACAGAAGGG
    ACAACTGCTT CGGCCCACAA CAACCATCCA AGTCAAAGAA TAACAACACA GAGTCAAGAG
    GATGTTTCCT GGACAGATTT CTTCGACCCA ATCTCACATC CAATGGGACA AGGTCATCAA
    ACAGAAAGCA AGGATACAGA CTCCAGTCAT AGTACAACCC TTCAGCCTAC TGCAGCTCCA
    AATACCCATT TGGTGGAAGA CTTGAACAGG ACAGGACCAC TTTCAGTGAC AACTCCACAG
    AGTCATTCTC AGAACTTCTC TACATTACAT GGAGAGCCGG AAGAAGACGA AAACCATCCA
    ACAACTTCTA TTCTGCCATC TAGCACTAAG AGCGGCGCTA AAGATGCAAG AAGAGGTGGA
    AGTCTTCCCA CAGATACAAC TACTTCTGTA GAAGGCTACA CCTTTCAATA CCCAGACACA
    ATGGAAAATG GGACTCTCTT CCCAGTGACC CCTGCTAAAA CTGAGGTCTT TGGAGAAACT
    GAAGTGACTC TTGCTACTGA CTCCAACGTT AATGTTGATG GCTCCTTACC AGGAGATCGA
    GACTCATCCA AGGACTCCAG GGGGAGTTCC CGCACTGTGA CTCATGGATC CGAATTAGCT
    GGACACTCAA GTGCGAACCA GGACAGTGGA GTGACCACAA CTTCTGGTCC TATGAGGAGA
    CCTCAGATTC CAGAATGGCT CATCATCTTG GCATCTCTCC TGGCACTGGC TCTGATTCTT
    GCCGTCTGCA TCGCGGTCAA TAGTAGGAGA AGGTGTGGGC AGAAGAAAAA GCTGGTGATC
    AACGGTGGCA ATGGGACGGT GGAAGACAGG AAACCCAGTG AGCTCAACGG GGAGGCCAGC
    AAGTCTCAGG AAATGGTGCA TTTGGTGAAC AAGGAACCAT CAGAGACCCC GGACCAGTGT
    ATGACAGCTG ACGAGACCCG GAATCTGCAG AGTGTGGACA TGAAGATTGG GGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu29958
    Clone ID Related Accession (Same CDS sequence) XM_006498646.2
    Accession Version XM_006498646.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2217bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-08-07
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006498646.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCCTC AACTGTGCAC TCAAAAAGCC ATGCAGCAGC TCAGAAACAA
    AATAATTGGA TATGGTCTTG GTTTGGTAAT TCACAGTCCA CAACTCAGAC TCAGGAGCCC
    ACAACGAGTG CAACTACAGC CTTGATGACC ACCCCTGAAA CACCACCCAA GAGGCAAGAA
    GCCCAGAACT GGTTTTCATG GTTATTTCAA CCATCAGAGT CCAAGAGTCA TCTTCATACA
    ACAACGAAGA TGCCTGTTGC AAGTACTCCA CGGGTTTCTG CCCGCACAGA AGACAACCAG
    GACTGGACCC AGTGGAAGCC AAACCATTCA AACCCAGAAG TACTACTCCA GACAACCACC
    AGGATGGCTG ATATAGACAG AATCAGCACC AGTGCTCATG GAGAAAATTG GACCCCGGAA
    CCACAGCCTC CTTTCAATAA CCATGAGTAT CAGGATGAAG AGGAGACCCC ACATGCTACA
    AGCACAACTC CTAATAGTAC AGCAGAAGCA GCAGCTACCC AGCAGGAGAC GTGGTTTCAG
    AACGGATGGC AGGGGAAGAA CCCCCCTACC CCAAGTGAAG ACTCCCATGT GACAGAAGGG
    ACAACTGCTT CGGCCCACAA CAACCATCCA AGTCAAAGAA TAACAACACA GAGTCAAGAG
    GATGTTTCCT GGACAGATTT CTTCGACCCA ATCTCACATC CAATGGGACA AGGTCATCAA
    ACAGAAAGCA AGGATACAGA CTCCAGTCAT AGTACAACCC TTCAGCCTAC TGCAGCTCCA
    AATACCCATT TGGTGGAAGA CTTGAACAGG ACAGGACCAC TTTCAGTGAC AACTCCACAG
    AGTCATTCTC AGAACTTCTC TACATTACAT GGAGAGCCGG AAGAAGACGA AAACCATCCA
    ACAACTTCTA TTCTGCCATC TAGCACTAAG AGCGGCGCTA AAGATGCAAG AAGAGGTGGA
    AGTCTTCCCA CAGATACAAC TACTTCTGTA GAAGGCTACA CCTTTCAATA CCCAGACACA
    ATGGAAAATG GGACTCTCTT CCCAGTGACC CCTGCTAAAA CTGAGGTCTT TGGAGAAACT
    GAAGTGACTC TTGCTACTGA CTCCAACGTT AATGTTGATG GCTCCTTACC AGGAGATCGA
    GACTCATCCA AGGACTCCAG GGGGAGTTCC CGCACTGTGA CTCATGGATC CGAATTAGCT
    GGACACTCAA GTGCGAACCA GGACAGTGGA GTGACCACAA CTTCTGGTCC TATGAGGAGA
    CCTCAGATTC CAGAATGGCT CATCATCTTG GCATCTCTCC TGGCACTGGC TCTGATTCTT
    GCCGTCTGCA TCGCGGTCAA TAGTAGGAGA AGGTGTGGGC AGAAGAAAAA GCTGGTGATC
    AACGGTGGCA ATGGGACGGT GGAAGACAGG AAACCCAGTG AGCTCAACGG GGAGGCCAGC
    AAGTCTCAGG AAATGGTGCA TTTGGTGAAC AAGGAACCAT CAGAGACCCC GGACCAGTGT
    ATGACAGCTG ACGAGACCCG GAATCTGCAG AGTGTGGACA TGAAGATTGG GGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006498709.1
    CDS324..2540
    Translation

    Target ORF information:

    RefSeq Version XM_006498646.2
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006498646.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCCTC AACTGTGCAC TCAAAAAGCC ATGCAGCAGC TCAGAAACAA
    AATAATTGGA TATGGTCTTG GTTTGGTAAT TCACAGTCCA CAACTCAGAC TCAGGAGCCC
    ACAACGAGTG CAACTACAGC CTTGATGACC ACCCCTGAAA CACCACCCAA GAGGCAAGAA
    GCCCAGAACT GGTTTTCATG GTTATTTCAA CCATCAGAGT CCAAGAGTCA TCTTCATACA
    ACAACGAAGA TGCCTGTTGC AAGTACTCCA CGGGTTTCTG CCCGCACAGA AGACAACCAG
    GACTGGACCC AGTGGAAGCC AAACCATTCA AACCCAGAAG TACTACTCCA GACAACCACC
    AGGATGGCTG ATATAGACAG AATCAGCACC AGTGCTCATG GAGAAAATTG GACCCCGGAA
    CCACAGCCTC CTTTCAATAA CCATGAGTAT CAGGATGAAG AGGAGACCCC ACATGCTACA
    AGCACAACTC CTAATAGTAC AGCAGAAGCA GCAGCTACCC AGCAGGAGAC GTGGTTTCAG
    AACGGATGGC AGGGGAAGAA CCCCCCTACC CCAAGTGAAG ACTCCCATGT GACAGAAGGG
    ACAACTGCTT CGGCCCACAA CAACCATCCA AGTCAAAGAA TAACAACACA GAGTCAAGAG
    GATGTTTCCT GGACAGATTT CTTCGACCCA ATCTCACATC CAATGGGACA AGGTCATCAA
    ACAGAAAGCA AGGATACAGA CTCCAGTCAT AGTACAACCC TTCAGCCTAC TGCAGCTCCA
    AATACCCATT TGGTGGAAGA CTTGAACAGG ACAGGACCAC TTTCAGTGAC AACTCCACAG
    AGTCATTCTC AGAACTTCTC TACATTACAT GGAGAGCCGG AAGAAGACGA AAACCATCCA
    ACAACTTCTA TTCTGCCATC TAGCACTAAG AGCGGCGCTA AAGATGCAAG AAGAGGTGGA
    AGTCTTCCCA CAGATACAAC TACTTCTGTA GAAGGCTACA CCTTTCAATA CCCAGACACA
    ATGGAAAATG GGACTCTCTT CCCAGTGACC CCTGCTAAAA CTGAGGTCTT TGGAGAAACT
    GAAGTGACTC TTGCTACTGA CTCCAACGTT AATGTTGATG GCTCCTTACC AGGAGATCGA
    GACTCATCCA AGGACTCCAG GGGGAGTTCC CGCACTGTGA CTCATGGATC CGAATTAGCT
    GGACACTCAA GTGCGAACCA GGACAGTGGA GTGACCACAA CTTCTGGTCC TATGAGGAGA
    CCTCAGATTC CAGAATGGCT CATCATCTTG GCATCTCTCC TGGCACTGGC TCTGATTCTT
    GCCGTCTGCA TCGCGGTCAA TAGTAGGAGA AGGTGTGGGC AGAAGAAAAA GCTGGTGATC
    AACGGTGGCA ATGGGACGGT GGAAGACAGG AAACCCAGTG AGCTCAACGG GGAGGCCAGC
    AAGTCTCAGG AAATGGTGCA TTTGGTGAAC AAGGAACCAT CAGAGACCCC GGACCAGTGT
    ATGACAGCTG ACGAGACCCG GAATCTGCAG AGTGTGGACA TGAAGATTGG GGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu29959
    Clone ID Related Accession (Same CDS sequence) XM_006498647.2
    Accession Version XM_006498647.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2100bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-08-07
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006498647.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCAGTACGGA GTCAAATACC AACCCAACAG GCTGGGAGCC AAATGAGGAA
    AATGAAGATG AAACAGACAA ATACCCCAGT TTTTCTGGAT CAGGCATTGA TGATGATGAA
    GATTTTATCT CCAGTACCAT TGCAAGTACT CCACGGGTTT CTGCCCGCAC AGAAGACAAC
    CAGGACTGGA CCCAGTGGAA GCCAAACCAT TCAAACCCAG AAGTACTACT CCAGACAACC
    ACCAGGATGG CTGATATAGA CAGAATCAGC ACCAGTGCTC ATGGAGAAAA TTGGACCCCG
    GAACCACAGC CTCCTTTCAA TAACCATGAG TATCAGGATG AAGAGGAGAC CCCACATGCT
    ACAAGCACAA CTCCTAATAG TACAGCAGAA GCAGCAGCTA CCCAGCAGGA GACGTGGTTT
    CAGAACGGAT GGCAGGGGAA GAACCCCCCT ACCCCAAGTG AAGACTCCCA TGTGACAGAA
    GGGACAACTG CTTCGGCCCA CAACAACCAT CCAAGTCAAA GAATAACAAC ACAGAGTCAA
    GAGGATGTTT CCTGGACAGA TTTCTTCGAC CCAATCTCAC ATCCAATGGG ACAAGGTCAT
    CAAACAGAAA GCAAGGATAC AGACTCCAGT CATAGTACAA CCCTTCAGCC TACTGCAGCT
    CCAAATACCC ATTTGGTGGA AGACTTGAAC AGGACAGGAC CACTTTCAGT GACAACTCCA
    CAGAGTCATT CTCAGAACTT CTCTACATTA CATGGAGAGC CGGAAGAAGA CGAAAACCAT
    CCAACAACTT CTATTCTGCC ATCTAGCACT AAGAGCGGCG CTAAAGATGC AAGAAGAGGT
    GGAAGTCTTC CCACAGATAC AACTACTTCT GTAGAAGGCT ACACCTTTCA ATACCCAGAC
    ACAATGGAAA ATGGGACTCT CTTCCCAGTG ACCCCTGCTA AAACTGAGGT CTTTGGAGAA
    ACTGAAGTGA CTCTTGCTAC TGACTCCAAC GTTAATGTTG ATGGCTCCTT ACCAGGAGAT
    CGAGACTCAT CCAAGGACTC CAGGGGGAGT TCCCGCACTG TGACTCATGG ATCCGAATTA
    GCTGGACACT CAAGTGCGAA CCAGGACAGT GGAGTGACCA CAACTTCTGG TCCTATGAGG
    AGACCTCAGA TTCCAGAATG GCTCATCATC TTGGCATCTC TCCTGGCACT GGCTCTGATT
    CTTGCCGTCT GCATCGCGGT CAATAGTAGG AGAAGGTGTG GGCAGAAGAA AAAGCTGGTG
    ATCAACGGTG GCAATGGGAC GGTGGAAGAC AGGAAACCCA GTGAGCTCAA CGGGGAGGCC
    AGCAAGTCTC AGGAAATGGT GCATTTGGTG AACAAGGAAC CATCAGAGAC CCCGGACCAG
    TGTATGACAG CTGACGAGAC CCGGAATCTG CAGAGTGTGG ACATGAAGAT TGGGGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006498710.1
    CDS324..2423
    Translation

    Target ORF information:

    RefSeq Version XM_006498647.2
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006498647.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCAGTACGGA GTCAAATACC AACCCAACAG GCTGGGAGCC AAATGAGGAA
    AATGAAGATG AAACAGACAA ATACCCCAGT TTTTCTGGAT CAGGCATTGA TGATGATGAA
    GATTTTATCT CCAGTACCAT TGCAAGTACT CCACGGGTTT CTGCCCGCAC AGAAGACAAC
    CAGGACTGGA CCCAGTGGAA GCCAAACCAT TCAAACCCAG AAGTACTACT CCAGACAACC
    ACCAGGATGG CTGATATAGA CAGAATCAGC ACCAGTGCTC ATGGAGAAAA TTGGACCCCG
    GAACCACAGC CTCCTTTCAA TAACCATGAG TATCAGGATG AAGAGGAGAC CCCACATGCT
    ACAAGCACAA CTCCTAATAG TACAGCAGAA GCAGCAGCTA CCCAGCAGGA GACGTGGTTT
    CAGAACGGAT GGCAGGGGAA GAACCCCCCT ACCCCAAGTG AAGACTCCCA TGTGACAGAA
    GGGACAACTG CTTCGGCCCA CAACAACCAT CCAAGTCAAA GAATAACAAC ACAGAGTCAA
    GAGGATGTTT CCTGGACAGA TTTCTTCGAC CCAATCTCAC ATCCAATGGG ACAAGGTCAT
    CAAACAGAAA GCAAGGATAC AGACTCCAGT CATAGTACAA CCCTTCAGCC TACTGCAGCT
    CCAAATACCC ATTTGGTGGA AGACTTGAAC AGGACAGGAC CACTTTCAGT GACAACTCCA
    CAGAGTCATT CTCAGAACTT CTCTACATTA CATGGAGAGC CGGAAGAAGA CGAAAACCAT
    CCAACAACTT CTATTCTGCC ATCTAGCACT AAGAGCGGCG CTAAAGATGC AAGAAGAGGT
    GGAAGTCTTC CCACAGATAC AACTACTTCT GTAGAAGGCT ACACCTTTCA ATACCCAGAC
    ACAATGGAAA ATGGGACTCT CTTCCCAGTG ACCCCTGCTA AAACTGAGGT CTTTGGAGAA
    ACTGAAGTGA CTCTTGCTAC TGACTCCAAC GTTAATGTTG ATGGCTCCTT ACCAGGAGAT
    CGAGACTCAT CCAAGGACTC CAGGGGGAGT TCCCGCACTG TGACTCATGG ATCCGAATTA
    GCTGGACACT CAAGTGCGAA CCAGGACAGT GGAGTGACCA CAACTTCTGG TCCTATGAGG
    AGACCTCAGA TTCCAGAATG GCTCATCATC TTGGCATCTC TCCTGGCACT GGCTCTGATT
    CTTGCCGTCT GCATCGCGGT CAATAGTAGG AGAAGGTGTG GGCAGAAGAA AAAGCTGGTG
    ATCAACGGTG GCAATGGGAC GGTGGAAGAC AGGAAACCCA GTGAGCTCAA CGGGGAGGCC
    AGCAAGTCTC AGGAAATGGT GCATTTGGTG AACAAGGAAC CATCAGAGAC CCCGGACCAG
    TGTATGACAG CTGACGAGAC CCGGAATCTG CAGAGTGTGG ACATGAAGAT TGGGGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu22812
    Clone ID Related Accession (Same CDS sequence) NM_009851.2
    Accession Version NM_009851.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2343bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2020-01-04
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform a precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL844155.6, AK045226.1 and AJ251594.1. On Jan 20, 2006 this sequence version replaced NM_009851.1. Transcript Variant: This variant (1) represents the longest transcript and it encodes the longest protein (isoform a). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AJ251594.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCCTC AACTGTGCAC TCAAAAAGCC ATGCAGCAGC TCAGAAACAA
    AATAATTGGA TATGGTCTTG GTTTGGTAAT TCACAGTCCA CAACTCAGAC TCAGGAGCCC
    ACAACGAGTG CAACTACAGC CTTGATGACC ACCCCTGAAA CACCACCCAA GAGGCAAGAA
    GCCCAGAACT GGTTTTCATG GTTATTTCAA CCATCAGAGT CCAAGAGTCA TCTTCATACA
    ACAACGAAGA TGCCTGGTAC GGAGTCAAAT ACCAACCCAA CAGGCTGGGA GCCAAATGAG
    GAAAATGAAG ATGAAACAGA CAAATACCCC AGTTTTTCTG GATCAGGCAT TGATGATGAT
    GAAGATTTTA TCTCCAGTAC CATTGCAAGT ACTCCACGGG TTTCTGCCCG CACAGAAGAC
    AACCAGGACT GGACCCAGTG GAAGCCAAAC CATTCAAACC CAGAAGTACT ACTCCAGACA
    ACCACCAGGA TGGCTGATAT AGACAGAATC AGCACCAGTG CTCATGGAGA AAATTGGACC
    CCGGAACCAC AGCCTCCTTT CAATAACCAT GAGTATCAGG ATGAAGAGGA GACCCCACAT
    GCTACAAGCA CAACTCCTAA TAGTACAGCA GAAGCAGCAG CTACCCAGCA GGAGACGTGG
    TTTCAGAACG GATGGCAGGG GAAGAACCCC CCTACCCCAA GTGAAGACTC CCATGTGACA
    GAAGGGACAA CTGCTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC ACTAAGAGCG GCGCTAAAGA TGCAAGAAGA
    GGTGGAAGTC TTCCCACAGA TACAACTACT TCTGTAGAAG GCTACACCTT TCAATACCCA
    GACACAATGG AAAATGGGAC TCTCTTCCCA GTGACCCCTG CTAAAACTGA GGTCTTTGGA
    GAAACTGAAG TGACTCTTGC TACTGACTCC AACGTTAATG TTGATGGCTC CTTACCAGGA
    GATCGAGACT CATCCAAGGA CTCCAGGGGG AGTTCCCGCA CTGTGACTCA TGGATCCGAA
    TTAGCTGGAC ACTCAAGTGC GAACCAGGAC AGTGGAGTGA CCACAACTTC TGGTCCTATG
    AGGAGACCTC AGATTCCAGA ATGGCTCATC ATCTTGGCAT CTCTCCTGGC ACTGGCTCTG
    ATTCTTGCCG TCTGCATCGC GGTCAATAGT AGGAGAAGGT GTGGGCAGAA GAAAAAGCTG
    GTGATCAACG GTGGCAATGG GACGGTGGAA GACAGGAAAC CCAGTGAGCT CAACGGGGAG
    GCCAGCAAGT CTCAGGAAAT GGTGCATTTG GTGAACAAGG AACCATCAGA GACCCCGGAC
    CAGTGTATGA CAGCTGACGA GACCCGGAAT CTGCAGAGTG TGGACATGAA GATTGGGGTG
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_033981.2
    CDS320..2662
    Translation

    Target ORF information:

    RefSeq Version NM_009851.2
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_009851.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCCTC AACTGTGCAC TCAAAAAGCC ATGCAGCAGC TCAGAAACAA
    AATAATTGGA TATGGTCTTG GTTTGGTAAT TCACAGTCCA CAACTCAGAC TCAGGAGCCC
    ACAACGAGTG CAACTACAGC CTTGATGACC ACCCCTGAAA CACCACCCAA GAGGCAAGAA
    GCCCAGAACT GGTTTTCATG GTTATTTCAA CCATCAGAGT CCAAGAGTCA TCTTCATACA
    ACAACGAAGA TGCCTGGTAC GGAGTCAAAT ACCAACCCAA CAGGCTGGGA GCCAAATGAG
    GAAAATGAAG ATGAAACAGA CAAATACCCC AGTTTTTCTG GATCAGGCAT TGATGATGAT
    GAAGATTTTA TCTCCAGTAC CATTGCAAGT ACTCCACGGG TTTCTGCCCG CACAGAAGAC
    AACCAGGACT GGACCCAGTG GAAGCCAAAC CATTCAAACC CAGAAGTACT ACTCCAGACA
    ACCACCAGGA TGGCTGATAT AGACAGAATC AGCACCAGTG CTCATGGAGA AAATTGGACC
    CCGGAACCAC AGCCTCCTTT CAATAACCAT GAGTATCAGG ATGAAGAGGA GACCCCACAT
    GCTACAAGCA CAACTCCTAA TAGTACAGCA GAAGCAGCAG CTACCCAGCA GGAGACGTGG
    TTTCAGAACG GATGGCAGGG GAAGAACCCC CCTACCCCAA GTGAAGACTC CCATGTGACA
    GAAGGGACAA CTGCTTCGGC CCACAACAAC CATCCAAGTC AAAGAATAAC AACACAGAGT
    CAAGAGGATG TTTCCTGGAC AGATTTCTTC GACCCAATCT CACATCCAAT GGGACAAGGT
    CATCAAACAG AAAGCAAGGA TACAGACTCC AGTCATAGTA CAACCCTTCA GCCTACTGCA
    GCTCCAAATA CCCATTTGGT GGAAGACTTG AACAGGACAG GACCACTTTC AGTGACAACT
    CCACAGAGTC ATTCTCAGAA CTTCTCTACA TTACATGGAG AGCCGGAAGA AGACGAAAAC
    CATCCAACAA CTTCTATTCT GCCATCTAGC ACTAAGAGCG GCGCTAAAGA TGCAAGAAGA
    GGTGGAAGTC TTCCCACAGA TACAACTACT TCTGTAGAAG GCTACACCTT TCAATACCCA
    GACACAATGG AAAATGGGAC TCTCTTCCCA GTGACCCCTG CTAAAACTGA GGTCTTTGGA
    GAAACTGAAG TGACTCTTGC TACTGACTCC AACGTTAATG TTGATGGCTC CTTACCAGGA
    GATCGAGACT CATCCAAGGA CTCCAGGGGG AGTTCCCGCA CTGTGACTCA TGGATCCGAA
    TTAGCTGGAC ACTCAAGTGC GAACCAGGAC AGTGGAGTGA CCACAACTTC TGGTCCTATG
    AGGAGACCTC AGATTCCAGA ATGGCTCATC ATCTTGGCAT CTCTCCTGGC ACTGGCTCTG
    ATTCTTGCCG TCTGCATCGC GGTCAATAGT AGGAGAAGGT GTGGGCAGAA GAAAAAGCTG
    GTGATCAACG GTGGCAATGG GACGGTGGAA GACAGGAAAC CCAGTGAGCT CAACGGGGAG
    GCCAGCAAGT CTCAGGAAAT GGTGCATTTG GTGAACAAGG AACCATCAGA GACCCCGGAC
    CAGTGTATGA CAGCTGACGA GACCCGGAAT CTGCAGAGTG TGGACATGAA GATTGGGGTG
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMu22844
    Clone ID Related Accession (Same CDS sequence) NM_001177785.1
    Accession Version NM_001177785.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1974bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2020-01-04
    Organism Mus musculus(house mouse)
    Product CD44 antigen isoform d precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL844155.6, AK045226.1 and AJ251594.1. Transcript Variant: This variant (4) lacks several alternate, in-frame, exons, compared to variant 1. The resulting protein (isoform d) is shorter when it is compared to isoform a. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: X66084.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCAAG TACTCCACGG GTTTCTGCCC GCACAGAAGA CAACCAGGAC
    TGGACCCAGT GGAAGCCAAA CCATTCAAAC CCAGAAGTAC TACTCCAGAC AACCACCAGG
    ATGGCTGATA TAGACAGAAT CAGCACCAGT GCTCATGGAG AAAATTGGAC CCCGGAACCA
    CAGCCTCCTT TCAATAACCA TGAGTATCAG GATGAAGAGG AGACCCCACA TGCTACAAGC
    ACAACTCCTA ATAGTACAGC AGAAGCAGCA GCTACCCAGC AGGAGACGTG GTTTCAGAAC
    GGATGGCAGG GGAAGAACCC CCCTACCCCA AGTGAAGACT CCCATGTGAC AGAAGGGACA
    ACTGCTTCGG CCCACAACAA CCATCCAAGT CAAAGAATAA CAACACAGAG TCAAGAGGAT
    GTTTCCTGGA CAGATTTCTT CGACCCAATC TCACATCCAA TGGGACAAGG TCATCAAACA
    GAAAGCAAGG ATACAGACTC CAGTCATAGT ACAACCCTTC AGCCTACTGC AGCTCCAAAT
    ACCCATTTGG TGGAAGACTT GAACAGGACA GGACCACTTT CAGTGACAAC TCCACAGAGT
    CATTCTCAGA ACTTCTCTAC ATTACATGGA GAGCCGGAAG AAGACGAAAA CCATCCAACA
    ACTTCTATTC TGCCATCTAG CACTAAGAGC GGCGCTAAAG ATGCAAGAAG AGGTGGAAGT
    CTTCCCACAG ATACAACTAC TTCTGTAGAA GGCTACACCT TTCAATACCC AGACACAATG
    GAAAATGGGA CTCTCTTCCC AGTGACCCCT GCTAAAACTG AGGTCTTTGG AGAAACTGAA
    GTGACTCTTG CTACTGACTC CAACGTTAAT GTTGATGGCT CCTTACCAGG AGATCGAGAC
    TCATCCAAGG ACTCCAGGGG GAGTTCCCGC ACTGTGACTC ATGGATCCGA ATTAGCTGGA
    CACTCAAGTG CGAACCAGGA CAGTGGAGTG ACCACAACTT CTGGTCCTAT GAGGAGACCT
    CAGATTCCAG AATGGCTCAT CATCTTGGCA TCTCTCCTGG CACTGGCTCT GATTCTTGCC
    GTCTGCATCG CGGTCAATAG TAGGAGAAGG TGTGGGCAGA AGAAAAAGCT GGTGATCAAC
    GGTGGCAATG GGACGGTGGA AGACAGGAAA CCCAGTGAGC TCAACGGGGA GGCCAGCAAG
    TCTCAGGAAA TGGTGCATTT GGTGAACAAG GAACCATCAG AGACCCCGGA CCAGTGTATG
    ACAGCTGACG AGACCCGGAA TCTGCAGAGT GTGGACATGA AGATTGGGGT GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001171256.1
    CDS320..2293
    Translation

    Target ORF information:

    RefSeq Version NM_001177785.1
    Organism Mus musculus(house mouse)
    Definition Mus musculus CD44 antigen (Cd44), transcript variant 4, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001177785.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    ATGGACAAGT TTTGGTGGCA CACAGCTTGG GGACTTTGCC TCTTGCAGTT GAGCCTGGCA 
    CATCCACATC AGCAGATCGA TTTGAATGTA ACCTGCCGCT ACGCAGGTGT ATTCCATGTG
    GAGAAAAATG GCCGCTACAG TATCTCCCGG ACTGAGGCAG CTGACCTCTG CCAGGCTTTC
    AACAGTACCT TACCCACCAT GGACCAAATG AAGTTGGCCC TGAGCAAGGG TTTTGAAACA
    TGCAGGTATG GGTTCATAGA AGGAAATGTG GTAATTCCGA GGATTCATCC CAACGCTATC
    TGTGCAGCCA ACCACACAGG AGTATATATC CTCGTCACGT CCAACACCTC CCACTATGAC
    ACATATTGCT TCAATGCCTC AGCCCCTCCT GAAGAAGACT GTACATCAGT CACAGACCTA
    CCCAATTCCT TCGATGGACC GGTTACCATA ACTATTGTCA ACCGTGATGG TACTCGCTAC
    AGCAAGAAGG GCGAGTATAG AACACACCAA GAAGACATCG ATGCTTCAAA CATTATAGAT
    GACGATGTCA GCAGCGGCTC CACCATCGAG AAGAGCACCC CAGAAAGCTA CATTTTGCAC
    ACCTACCTTC CTACTGAACA GCCTACTGGA GATCAGGATG ACTCCTTCTT TATCCGGAGC
    ACCTTGGCCA CCATTGCAAG TACTCCACGG GTTTCTGCCC GCACAGAAGA CAACCAGGAC
    TGGACCCAGT GGAAGCCAAA CCATTCAAAC CCAGAAGTAC TACTCCAGAC AACCACCAGG
    ATGGCTGATA TAGACAGAAT CAGCACCAGT GCTCATGGAG AAAATTGGAC CCCGGAACCA
    CAGCCTCCTT TCAATAACCA TGAGTATCAG GATGAAGAGG AGACCCCACA TGCTACAAGC
    ACAACTCCTA ATAGTACAGC AGAAGCAGCA GCTACCCAGC AGGAGACGTG GTTTCAGAAC
    GGATGGCAGG GGAAGAACCC CCCTACCCCA AGTGAAGACT CCCATGTGAC AGAAGGGACA
    ACTGCTTCGG CCCACAACAA CCATCCAAGT CAAAGAATAA CAACACAGAG TCAAGAGGAT
    GTTTCCTGGA CAGATTTCTT CGACCCAATC TCACATCCAA TGGGACAAGG TCATCAAACA
    GAAAGCAAGG ATACAGACTC CAGTCATAGT ACAACCCTTC AGCCTACTGC AGCTCCAAAT
    ACCCATTTGG TGGAAGACTT GAACAGGACA GGACCACTTT CAGTGACAAC TCCACAGAGT
    CATTCTCAGA ACTTCTCTAC ATTACATGGA GAGCCGGAAG AAGACGAAAA CCATCCAACA
    ACTTCTATTC TGCCATCTAG CACTAAGAGC GGCGCTAAAG ATGCAAGAAG AGGTGGAAGT
    CTTCCCACAG ATACAACTAC TTCTGTAGAA GGCTACACCT TTCAATACCC AGACACAATG
    GAAAATGGGA CTCTCTTCCC AGTGACCCCT GCTAAAACTG AGGTCTTTGG AGAAACTGAA
    GTGACTCTTG CTACTGACTC CAACGTTAAT GTTGATGGCT CCTTACCAGG AGATCGAGAC
    TCATCCAAGG ACTCCAGGGG GAGTTCCCGC ACTGTGACTC ATGGATCCGA ATTAGCTGGA
    CACTCAAGTG CGAACCAGGA CAGTGGAGTG ACCACAACTT CTGGTCCTAT GAGGAGACCT
    CAGATTCCAG AATGGCTCAT CATCTTGGCA TCTCTCCTGG CACTGGCTCT GATTCTTGCC
    GTCTGCATCG CGGTCAATAG TAGGAGAAGG TGTGGGCAGA AGAAAAAGCT GGTGATCAAC
    GGTGGCAATG GGACGGTGGA AGACAGGAAA CCCAGTGAGC TCAACGGGGA GGCCAGCAAG
    TCTCAGGAAA TGGTGCATTT GGTGAACAAG GAACCATCAG AGACCCCGGA CCAGTGTATG
    ACAGCTGACG AGACCCGGAA TCTGCAGAGT GTGGACATGA AGATTGGGGT GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.