Atp6v0c cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Atp6v0c
Entrez Gene ID	11984
Full Name	ATPase, H+ transporting, lysosomal V0 subunit C
Synonyms	Atp6c,Atp6c2,Atp6l,Atpl,Atpl-rs1,PL16,VATL,Vma3
General protein information	Preferred Names ATPase, H+ transporting, lysosomal V0 subunit C Names V-type proton ATPase 16 kDa proteolipid subunit ATPase, H+ transporting, lysosomal (vacuolar proton pump) 16 kDa ATPase, H+ transporting, lysosomal 16kD, V0 subunit C ATPase, H+ transporting, lysosomal 2 H(+)-ATPase (mvp) V-ATPase 16 kDa proteolipid subunit vacuolar proton pump 16 kDa proteolipid subunit
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 17 Map Location: 17\|17 A3.3

mRNA and Protein(s)

mRNA	Protein	Name
NM_009729.4	NP_033859.1	V-type proton ATPase 16 kDa proteolipid subunit isoform b
NM_001361531.1	NP_001348460.1	V-type proton ATPase 16 kDa proteolipid subunit isoform a
NM_001361535.1	NP_001348464.1	V-type proton ATPase 16 kDa proteolipid subunit isoform c
NM_001361533.1	NP_001348462.1	V-type proton ATPase 16 kDa proteolipid subunit isoform c
NM_001361532.1	NP_001348461.1	V-type proton ATPase 16 kDa proteolipid subunit isoform b
NM_001361534.1	NP_001348463.1	V-type proton ATPase 16 kDa proteolipid subunit isoform c
NM_009729.3	NP_033859.1	V-type proton ATPase 16 kDa proteolipid subunit

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	atp6v0cb	NP_991117.1
Bos taurus (cattle)	ATP6V0C	NP_001017954.1
Rattus norvegicus (Norway rat)	Atp6v0c	NP_570836.1
Danio rerio (zebrafish)	atp6v0ca	NP_001098606.2
Drosophila melanogaster (fruit fly)	Vha16-3	NP_001189086.1
Saccharomyces cerevisiae (baker's yeast)	VMA3	NP_010887.3
Eremothecium gossypii	AGOS_AEL074W	NP_984787.1
Neurospora crassa	NCU01332	XP_961418.2
Homo sapiens (human)	ATP6V0C	NP_001185498.1
Canis lupus familiaris (dog)	ATP6V0C	XP_537002.1
Gallus gallus (chicken)	ATP6V0C	NP_001264953.1
Caenorhabditis elegans (roundworm)	vha-2	NP_499166.1
Schizosaccharomyces pombe (fission yeast)	vma3	NP_594799.1
Pan troglodytes (chimpanzee)	ATP6V0C	XP_510748.3
Drosophila melanogaster (fruit fly)	Vha16-1	NP_724476.1
Caenorhabditis elegans (roundworm)	vha-1	NP_499165.1
Magnaporthe oryzae (rice blast fungus)	MGG_02466	XP_003709260.1
Oryza sativa (rice)	Os01g0962300	NP_001045477.1
	ATP6V0C	XP_001088617.1
Mus musculus (house mouse)	Atp6v0c	NP_033859.1
Caenorhabditis elegans (roundworm)	vha-3	NP_500188.1
Kluyveromyces lactis	KLLA0E22441g	XP_454966.1
Xenopus tropicalis (tropical clawed frog)	atp6v0c	NP_988893.1

Gene Ontology
Bibliography

Related articles in PubMed

The tissue-specific transcriptomic landscape of the mid-gestational mouse embryo.
Werber M, Wittler L, Timmermann B, Grote P, Herrmann BG
Development (Cambridge, England)141(11)2325-30(2014 Jun)

V-ATPase inhibition by archazolid leads to lysosomal dysfunction resulting in impaired cathepsin B activation in vivo.
Kubisch R, Fr?hlich T, Arnold GJ, Schreiner L, von Schwarzenberg K, Roidl A, Vollmar AM, Wagner E
International journal of cancer134(10)2478-88(2014 May)

Requirement of prorenin receptor and vacuolar H+-ATPase-mediated acidification for Wnt signaling.
Cruciat CM, Ohkawara B, Acebron SP, Karaulanov E, Reinhard C, Ingelfinger D, Boutros M, Niehrs C
Science (New York, N.Y.)327(5964)459-63(2010 Jan)

Differential expression of a subunit isoforms of the vacuolar-type proton pump ATPase in mouse endocrine tissues.
Sun-Wada GH, Tabata H, Kawamura N, Futai M, Wada Y
Cell and tissue research329(2)239-48(2007 Aug)

Construction of a multi-functional cDNA library specific for mouse pancreatic islets and its application to microarray.
Nishimura M, Yokoi N, Miki T, Horikawa Y, Yoshioka H, Takeda J, Ohara O, Seino S
DNA research : an international journal for rapid publication of reports on genes and genomes11(5)315-23(2004 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Results show that inhibition of V-ATPase by archazolid reduces the activity of prometastatic proteases like cathepsin B in vitro and in vivo.
Title: V-ATPase inhibition by archazolid leads to lysosomal dysfunction resulting in impaired cathepsin B activation in vivo.

mapped three ATP6V0C genes (Atp6v0c, Atp6v0c-ps1 and Atp6voc-ps2) in the murine genome
Title: Chromosomal localization of three vacuolar-H+ -ATPase 16 kDa subunit (ATP6V0C) genes in the murine genome.

The following Atp6v0c gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Atp6v0c cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMu22952	NM_009729.4 Latest version!	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
OMu22952	NM_001361532.1 Latest version!	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
OMu84030	NM_001361531.1 Latest version!	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
OMu84034	NM_001361533.1 Latest version!	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
OMu84034	NM_001361535.1 Latest version!	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 6, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
OMu84034	NM_001361534.1 Latest version!	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
View Old Accession Versions >>
OMu22952	NM_009729.3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Atp6v0c ( NM_009729.4 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_033859.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 3, mRNA.

Price & Availability↑

CloneID	OMu22952
Clone ID Related Accession (Same CDS sequence)	NM_009729.4 , NM_001361532.1 , NM_009729.3
Accession Version	NM_009729.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 468bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-25
Organism	Mus musculus(house mouse)
Product	V-type proton ATPase 16 kDa proteolipid subunit isoform b
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY245103.1, AK002570.1 and BC050939.1. On Mar 28, 2018 this sequence version replaced NM_009729.3. Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform (b). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC099475.1, AK014361.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164134 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCTGACA TCAAGAACAA CCCCGAATAT TCTTCGTTTT TCGGTGTCAT GGGCGCCTCG 
TCCGCCATGG TCTTCAGCGC CATGGGAGCC GCCTATGGCA CAGCCAAGAG TGGCACTGGC 
ATCGCAGCCA TGTCAGTCAT GAGGCCAGAG CTGATCATGA AGTCCATCAT CCCAGTGGTT 
ATGGCTGGGA TCATCGCCAT CTACGGCCTG GTGGTGGCAG TACTTATCGC TAACTCCCTG 
ACTGATGGCA TCACCCTCTA CAGGAGTTTT CTTCAACTGG GTGCTGGCCT GAGTGTGGGG 
CTGAGTGGCC TGGCTGCTGG CTTTGCCATT GGCATCGTCG GAGATGCTGG TGTTCGGGGC 
ACTGCCCAGC AGCCTCGACT GTTCGTGGGC ATGATCCTGA TCCTCATCTT TGCGGAGGTG 
CTTGGCCTCT ACGGTCTCAT CGTGGCCCTA ATCCTCTCCA CAAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_033859.1
CDS	167..634
Translation	MADIKNNPEYSSFFGVMGASSAMVFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

Target ORF information:

RefSeq Version	NM_009729.4
Organism	Mus musculus(house mouse)
Definition	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_009729.4

ORF Insert Sequence:

ATGGCTGACA TCAAGAACAA CCCCGAATAT TCTTCGTTTT TCGGTGTCAT GGGCGCCTCG 
TCCGCCATGG TCTTCAGCGC CATGGGAGCC GCCTATGGCA CAGCCAAGAG TGGCACTGGC 
ATCGCAGCCA TGTCAGTCAT GAGGCCAGAG CTGATCATGA AGTCCATCAT CCCAGTGGTT 
ATGGCTGGGA TCATCGCCAT CTACGGCCTG GTGGTGGCAG TACTTATCGC TAACTCCCTG 
ACTGATGGCA TCACCCTCTA CAGGAGTTTT CTTCAACTGG GTGCTGGCCT GAGTGTGGGG 
CTGAGTGGCC TGGCTGCTGG CTTTGCCATT GGCATCGTCG GAGATGCTGG TGTTCGGGGC 
ACTGCCCAGC AGCCTCGACT GTTCGTGGGC ATGATCCTGA TCCTCATCTT TGCGGAGGTG 
CTTGGCCTCT ACGGTCTCAT CGTGGCCCTA ATCCTCTCCA CAAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Atp6v0c ( NM_001361532.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001348461.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 2, mRNA.

Price & Availability↑

CloneID	OMu22952
Clone ID Related Accession (Same CDS sequence)	NM_009729.4 , NM_001361532.1 , NM_009729.3
Accession Version	NM_001361532.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 468bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-11-16
Organism	Mus musculus(house mouse)
Product	V-type proton ATPase 16 kDa proteolipid subunit isoform b
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT010502.14. Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform (b). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660813.447861.1, CB955441.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164134 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCTGACA TCAAGAACAA CCCCGAATAT TCTTCGTTTT TCGGTGTCAT GGGCGCCTCG 
TCCGCCATGG TCTTCAGCGC CATGGGAGCC GCCTATGGCA CAGCCAAGAG TGGCACTGGC 
ATCGCAGCCA TGTCAGTCAT GAGGCCAGAG CTGATCATGA AGTCCATCAT CCCAGTGGTT 
ATGGCTGGGA TCATCGCCAT CTACGGCCTG GTGGTGGCAG TACTTATCGC TAACTCCCTG 
ACTGATGGCA TCACCCTCTA CAGGAGTTTT CTTCAACTGG GTGCTGGCCT GAGTGTGGGG 
CTGAGTGGCC TGGCTGCTGG CTTTGCCATT GGCATCGTCG GAGATGCTGG TGTTCGGGGC 
ACTGCCCAGC AGCCTCGACT GTTCGTGGGC ATGATCCTGA TCCTCATCTT TGCGGAGGTG 
CTTGGCCTCT ACGGTCTCAT CGTGGCCCTA ATCCTCTCCA CAAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001348461.1
CDS	79..546
Translation	MADIKNNPEYSSFFGVMGASSAMVFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

Target ORF information:

RefSeq Version	NM_001361532.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001361532.1

ORF Insert Sequence:

ATGGCTGACA TCAAGAACAA CCCCGAATAT TCTTCGTTTT TCGGTGTCAT GGGCGCCTCG 
TCCGCCATGG TCTTCAGCGC CATGGGAGCC GCCTATGGCA CAGCCAAGAG TGGCACTGGC 
ATCGCAGCCA TGTCAGTCAT GAGGCCAGAG CTGATCATGA AGTCCATCAT CCCAGTGGTT 
ATGGCTGGGA TCATCGCCAT CTACGGCCTG GTGGTGGCAG TACTTATCGC TAACTCCCTG 
ACTGATGGCA TCACCCTCTA CAGGAGTTTT CTTCAACTGG GTGCTGGCCT GAGTGTGGGG 
CTGAGTGGCC TGGCTGCTGG CTTTGCCATT GGCATCGTCG GAGATGCTGG TGTTCGGGGC 
ACTGCCCAGC AGCCTCGACT GTTCGTGGGC ATGATCCTGA TCCTCATCTT TGCGGAGGTG 
CTTGGCCTCT ACGGTCTCAT CGTGGCCCTA ATCCTCTCCA CAAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Atp6v0c ( NM_009729.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_033859.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), mRNA.

Price & Availability↑

CloneID	OMu22952
Clone ID Related Accession (Same CDS sequence)	NM_009729.4 , NM_001361532.1 , NM_009729.3
Accession Version	NM_009729.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 468bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-11-01
Organism	Mus musculus(house mouse)
Product	V-type proton ATPase 16 kDa proteolipid subunit
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CT010502.14. On Apr 27, 2007 this sequence version replaced NM_009729.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK014361.1, AK002570.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164134 [ECO:0000348] ##Evidence-Data-END##

ATGGCTGACA TCAAGAACAA CCCCGAATAT TCTTCGTTTT TCGGTGTCAT GGGCGCCTCG 
TCCGCCATGG TCTTCAGCGC CATGGGAGCC GCCTATGGCA CAGCCAAGAG TGGCACTGGC 
ATCGCAGCCA TGTCAGTCAT GAGGCCAGAG CTGATCATGA AGTCCATCAT CCCAGTGGTT 
ATGGCTGGGA TCATCGCCAT CTACGGCCTG GTGGTGGCAG TACTTATCGC TAACTCCCTG 
ACTGATGGCA TCACCCTCTA CAGGAGTTTT CTTCAACTGG GTGCTGGCCT GAGTGTGGGG 
CTGAGTGGCC TGGCTGCTGG CTTTGCCATT GGCATCGTCG GAGATGCTGG TGTTCGGGGC 
ACTGCCCAGC AGCCTCGACT GTTCGTGGGC ATGATCCTGA TCCTCATCTT TGCGGAGGTG 
CTTGGCCTCT ACGGTCTCAT CGTGGCCCTA ATCCTCTCCA CAAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_033859.1
CDS	146..613
Translation	MADIKNNPEYSSFFGVMGASSAMVFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

Target ORF information:

RefSeq Version	NM_009729.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_009729.3

ORF Insert Sequence:

ATGGCTGACA TCAAGAACAA CCCCGAATAT TCTTCGTTTT TCGGTGTCAT GGGCGCCTCG 
TCCGCCATGG TCTTCAGCGC CATGGGAGCC GCCTATGGCA CAGCCAAGAG TGGCACTGGC 
ATCGCAGCCA TGTCAGTCAT GAGGCCAGAG CTGATCATGA AGTCCATCAT CCCAGTGGTT 
ATGGCTGGGA TCATCGCCAT CTACGGCCTG GTGGTGGCAG TACTTATCGC TAACTCCCTG 
ACTGATGGCA TCACCCTCTA CAGGAGTTTT CTTCAACTGG GTGCTGGCCT GAGTGTGGGG 
CTGAGTGGCC TGGCTGCTGG CTTTGCCATT GGCATCGTCG GAGATGCTGG TGTTCGGGGC 
ACTGCCCAGC AGCCTCGACT GTTCGTGGGC ATGATCCTGA TCCTCATCTT TGCGGAGGTG 
CTTGGCCTCT ACGGTCTCAT CGTGGCCCTA ATCCTCTCCA CAAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Atp6v0c ( NM_001361531.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001348460.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 1, mRNA.

Price & Availability↑

CloneID	OMu84030
Clone ID Related Accession (Same CDS sequence)	NM_001361531.1
Accession Version	NM_001361531.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-25
Organism	Mus musculus(house mouse)
Product	V-type proton ATPase 16 kDa proteolipid subunit isoform a
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY140472.1, BP769833.1 and CT010502.14. Transcript Variant: This variant (1) encodes the longest isoform (a). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BP769833.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164134, SAMN01164143 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGATCCCAA AACCCGTAGG GTTCGAGAAG ACGACTGCGT GGAGCCGCGG GCCAGCGAAG 
ACCCAGGCAA GGCTGAGCGT TGGGCCCCGG GCCCCGAGGA CTGGTGCCAG GGCCCATAAA 
TTGTCCAAGG GCTGCCGGCG AGCCTGGAGC CTCGCTCCCC CACCGGCGCA AAGTGACATG 
GCTGACATCA AGAACAACCC CGAATATTCT TCGTTTTTCG GTGTCATGGG CGCCTCGTCC 
GCCATGGTCT TCAGCGCCAT GGGAGCCGCC TATGGCACAG CCAAGAGTGG CACTGGCATC 
GCAGCCATGT CAGTCATGAG GCCAGAGCTG ATCATGAAGT CCATCATCCC AGTGGTTATG 
GCTGGGATCA TCGCCATCTA CGGCCTGGTG GTGGCAGTAC TTATCGCTAA CTCCCTGACT 
GATGGCATCA CCCTCTACAG GAGTTTTCTT CAACTGGGTG CTGGCCTGAG TGTGGGGCTG 
AGTGGCCTGG CTGCTGGCTT TGCCATTGGC ATCGTCGGAG ATGCTGGTGT TCGGGGCACT 
GCCCAGCAGC CTCGACTGTT CGTGGGCATG ATCCTGATCC TCATCTTTGC GGAGGTGCTT 
GGCCTCTACG GTCTCATCGT GGCCCTAATC CTCTCCACAA AGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001348460.1
CDS	11..655
Translation	MIPKPVGFEKTTAWSRGPAKTQARLSVGPRAPRTGARAHKLSKGCRRAWSLAPPPAQSDMADIKNNPEYSSFFGVMGASSAMVFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

Target ORF information:

RefSeq Version	NM_001361531.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001361531.1

ORF Insert Sequence:

ATGATCCCAA AACCCGTAGG GTTCGAGAAG ACGACTGCGT GGAGCCGCGG GCCAGCGAAG 
ACCCAGGCAA GGCTGAGCGT TGGGCCCCGG GCCCCGAGGA CTGGTGCCAG GGCCCATAAA 
TTGTCCAAGG GCTGCCGGCG AGCCTGGAGC CTCGCTCCCC CACCGGCGCA AAGTGACATG 
GCTGACATCA AGAACAACCC CGAATATTCT TCGTTTTTCG GTGTCATGGG CGCCTCGTCC 
GCCATGGTCT TCAGCGCCAT GGGAGCCGCC TATGGCACAG CCAAGAGTGG CACTGGCATC 
GCAGCCATGT CAGTCATGAG GCCAGAGCTG ATCATGAAGT CCATCATCCC AGTGGTTATG 
GCTGGGATCA TCGCCATCTA CGGCCTGGTG GTGGCAGTAC TTATCGCTAA CTCCCTGACT 
GATGGCATCA CCCTCTACAG GAGTTTTCTT CAACTGGGTG CTGGCCTGAG TGTGGGGCTG 
AGTGGCCTGG CTGCTGGCTT TGCCATTGGC ATCGTCGGAG ATGCTGGTGT TCGGGGCACT 
GCCCAGCAGC CTCGACTGTT CGTGGGCATG ATCCTGATCC TCATCTTTGC GGAGGTGCTT 
GGCCTCTACG GTCTCATCGT GGCCCTAATC CTCTCCACAA AGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Atp6v0c ( NM_001361535.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001348464.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 6, mRNA.

Price & Availability↑

CloneID	OMu84034
Clone ID Related Accession (Same CDS sequence)	NM_001361535.1 , NM_001361533.1 , NM_001361534.1
Accession Version	NM_001361535.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-25
Organism	Mus musculus(house mouse)
Product	V-type proton ATPase 16 kDa proteolipid subunit isoform c
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB873227.1 and CT010502.14. Transcript Variant: This variant (6) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a. Variants 4-6 all encode the same isoform (c). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BB873227.1, BB871166.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGGAGCCG CCTATGGCAC AGCCAAGAGT GGCACTGGCA TCGCAGCCAT GTCAGTCATG 
AGGCCAGAGC TGATCATGAA GTCCATCATC CCAGTGGTTA TGGCTGGGAT CATCGCCATC 
TACGGCCTGG TGGTGGCAGT ACTTATCGCT AACTCCCTGA CTGATGGCAT CACCCTCTAC 
AGGAGTTTTC TTCAACTGGG TGCTGGCCTG AGTGTGGGGC TGAGTGGCCT GGCTGCTGGC 
TTTGCCATTG GCATCGTCGG AGATGCTGGT GTTCGGGGCA CTGCCCAGCA GCCTCGACTG 
TTCGTGGGCA TGATCCTGAT CCTCATCTTT GCGGAGGTGC TTGGCCTCTA CGGTCTCATC 
GTGGCCCTAA TCCTCTCCAC AAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001348464.1
CDS	98..484
Translation	MGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

Target ORF information:

RefSeq Version	NM_001361535.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 6, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001361535.1

ORF Insert Sequence:

ATGGGAGCCG CCTATGGCAC AGCCAAGAGT GGCACTGGCA TCGCAGCCAT GTCAGTCATG 
AGGCCAGAGC TGATCATGAA GTCCATCATC CCAGTGGTTA TGGCTGGGAT CATCGCCATC 
TACGGCCTGG TGGTGGCAGT ACTTATCGCT AACTCCCTGA CTGATGGCAT CACCCTCTAC 
AGGAGTTTTC TTCAACTGGG TGCTGGCCTG AGTGTGGGGC TGAGTGGCCT GGCTGCTGGC 
TTTGCCATTG GCATCGTCGG AGATGCTGGT GTTCGGGGCA CTGCCCAGCA GCCTCGACTG 
TTCGTGGGCA TGATCCTGAT CCTCATCTTT GCGGAGGTGC TTGGCCTCTA CGGTCTCATC 
GTGGCCCTAA TCCTCTCCAC AAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Atp6v0c ( NM_001361533.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001348462.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 4, mRNA.

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CloneID	OMu84034
Clone ID Related Accession (Same CDS sequence)	NM_001361535.1 , NM_001361533.1 , NM_001361534.1
Accession Version	NM_001361533.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-21
Organism	Mus musculus(house mouse)
Product	V-type proton ATPase 16 kDa proteolipid subunit isoform c
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY140472.1 and CT010502.14. Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a. Variants 4-6 all encode the same isoform (c). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BI414345.1, BY140472.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGGAGCCG CCTATGGCAC AGCCAAGAGT GGCACTGGCA TCGCAGCCAT GTCAGTCATG 
AGGCCAGAGC TGATCATGAA GTCCATCATC CCAGTGGTTA TGGCTGGGAT CATCGCCATC 
TACGGCCTGG TGGTGGCAGT ACTTATCGCT AACTCCCTGA CTGATGGCAT CACCCTCTAC 
AGGAGTTTTC TTCAACTGGG TGCTGGCCTG AGTGTGGGGC TGAGTGGCCT GGCTGCTGGC 
TTTGCCATTG GCATCGTCGG AGATGCTGGT GTTCGGGGCA CTGCCCAGCA GCCTCGACTG 
TTCGTGGGCA TGATCCTGAT CCTCATCTTT GCGGAGGTGC TTGGCCTCTA CGGTCTCATC 
GTGGCCCTAA TCCTCTCCAC AAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001348462.1
CDS	79..465
Translation	MGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

Target ORF information:

RefSeq Version	NM_001361533.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001361533.1

ORF Insert Sequence:

ATGGGAGCCG CCTATGGCAC AGCCAAGAGT GGCACTGGCA TCGCAGCCAT GTCAGTCATG 
AGGCCAGAGC TGATCATGAA GTCCATCATC CCAGTGGTTA TGGCTGGGAT CATCGCCATC 
TACGGCCTGG TGGTGGCAGT ACTTATCGCT AACTCCCTGA CTGATGGCAT CACCCTCTAC 
AGGAGTTTTC TTCAACTGGG TGCTGGCCTG AGTGTGGGGC TGAGTGGCCT GGCTGCTGGC 
TTTGCCATTG GCATCGTCGG AGATGCTGGT GTTCGGGGCA CTGCCCAGCA GCCTCGACTG 
TTCGTGGGCA TGATCCTGAT CCTCATCTTT GCGGAGGTGC TTGGCCTCTA CGGTCTCATC 
GTGGCCCTAA TCCTCTCCAC AAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Atp6v0c ( NM_001361534.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_001348463.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 5, mRNA.

Price & Availability↑

CloneID	OMu84034
Clone ID Related Accession (Same CDS sequence)	NM_001361535.1 , NM_001361533.1 , NM_001361534.1
Accession Version	NM_001361534.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-24
Organism	Mus musculus(house mouse)
Product	V-type proton ATPase 16 kDa proteolipid subunit isoform c
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT010502.14. Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a. Variants 4-6 all encode the same isoform (c). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AV514696.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGGAGCCG CCTATGGCAC AGCCAAGAGT GGCACTGGCA TCGCAGCCAT GTCAGTCATG 
AGGCCAGAGC TGATCATGAA GTCCATCATC CCAGTGGTTA TGGCTGGGAT CATCGCCATC 
TACGGCCTGG TGGTGGCAGT ACTTATCGCT AACTCCCTGA CTGATGGCAT CACCCTCTAC 
AGGAGTTTTC TTCAACTGGG TGCTGGCCTG AGTGTGGGGC TGAGTGGCCT GGCTGCTGGC 
TTTGCCATTG GCATCGTCGG AGATGCTGGT GTTCGGGGCA CTGCCCAGCA GCCTCGACTG 
TTCGTGGGCA TGATCCTGAT CCTCATCTTT GCGGAGGTGC TTGGCCTCTA CGGTCTCATC 
GTGGCCCTAA TCCTCTCCAC AAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001348463.1
CDS	318..704
Translation	MGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK

Target ORF information:

RefSeq Version	NM_001361534.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit C (Atp6v0c), transcript variant 5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001361534.1

ORF Insert Sequence:

ATGGGAGCCG CCTATGGCAC AGCCAAGAGT GGCACTGGCA TCGCAGCCAT GTCAGTCATG 
AGGCCAGAGC TGATCATGAA GTCCATCATC CCAGTGGTTA TGGCTGGGAT CATCGCCATC 
TACGGCCTGG TGGTGGCAGT ACTTATCGCT AACTCCCTGA CTGATGGCAT CACCCTCTAC 
AGGAGTTTTC TTCAACTGGG TGCTGGCCTG AGTGTGGGGC TGAGTGGCCT GGCTGCTGGC 
TTTGCCATTG GCATCGTCGG AGATGCTGGT GTTCGGGGCA CTGCCCAGCA GCCTCGACTG 
TTCGTGGGCA TGATCCTGAT CCTCATCTTT GCGGAGGTGC TTGGCCTCTA CGGTCTCATC 
GTGGCCCTAA TCCTCTCCAC AAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The tissue-specific transcriptomic landscape of the mid-gestational mouse embryo.
Development (Cambridge, England)141(11)2325-30(2014 Jun)
Werber M,Wittler L,Timmermann B,Grote P,Herrmann BG

V-ATPase inhibition by archazolid leads to lysosomal dysfunction resulting in impaired cathepsin B activation in vivo.
International journal of cancer134(10)2478-88(2014 May)
Kubisch R,Fr?hlich T,Arnold GJ,Schreiner L,von Schwarzenberg K,Roidl A,Vollmar AM,Wagner E

Requirement of prorenin receptor and vacuolar H+-ATPase-mediated acidification for Wnt signaling.
Science (New York, N.Y.)327(5964)459-63(2010 Jan)
Cruciat CM,Ohkawara B,Acebron SP,Karaulanov E,Reinhard C,Ingelfinger D,Boutros M,Niehrs C

Differential expression of a subunit isoforms of the vacuolar-type proton pump ATPase in mouse endocrine tissues.
Cell and tissue research329(2)239-48(2007 Aug)
Sun-Wada GH,Tabata H,Kawamura N,Futai M,Wada Y

Construction of a multi-functional cDNA library specific for mouse pancreatic islets and its application to microarray.
DNA research : an international journal for rapid publication of reports on genes and genomes11(5)315-23(2004 Oct)
Nishimura M,Yokoi N,Miki T,Horikawa Y,Yoshioka H,Takeda J,Ohara O,Seino S

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Atp6v0c cDNA ORF clone, Mus musculus(house mouse)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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